Array 1 201642-203623 **** Predicted by CRISPRDetect 2.4 *** >NZ_NCMQ01000042.1 Klebsiella pneumoniae strain COL-Kpn37 contig_13_1, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 201642 29 100.0 32 ............................. CGATCGTCAATCTCTGGCAAGCGCTGAAAATT 201703 29 100.0 32 ............................. GTTGCGTTACCGATTATTTGTTTTTCCACTTT 201764 29 100.0 32 ............................. CCAAATGGGAGCATTTATCTTTTCGCCGGTCA 201825 29 100.0 32 ............................. AGACTAATTATATACACACTTAATCCTGAGTC 201886 29 100.0 32 ............................. CGCCGGTCAGTGGTCAGGCAGGAAAAAAGCAG 201947 29 100.0 32 ............................. TCATTTCTGACGCGAATGGCCGACATGCTGGG 202008 29 100.0 32 ............................. GAAATTAATCGCCCGTCTTCGCAGTCCTGCAA 202069 29 100.0 32 ............................. GCCAGTAGTTTTATTTCGAAATGCATTTCATT 202130 29 100.0 32 ............................. TAACCCACCGCAATTACGCGAATTAAACCCCA 202191 29 100.0 32 ............................. TAACGTCGCGGTGCGTCATCTCATCGGCAGTG 202252 29 100.0 32 ............................. TTGAGTTCGGGTCACGCCGCCGGGGTTGAGAG 202313 29 100.0 32 ............................. GCCTTTTCCGTTTTGCCGAAGAGTGTTGCGAA 202374 29 100.0 32 ............................. GATTATGCAAAACGACTTAGAGCCATAAGAAA 202435 29 100.0 32 ............................. TTTTCGGAATTACTGCGAGCGAGAGAGTGTCG 202496 29 100.0 32 ............................. GCTGCGTTGCCGTATTTACTCGCAGCGGCGGC 202557 29 100.0 32 ............................. TAACAGACGTATCATTTATGTTTGCTTACTCT 202618 29 100.0 32 ............................. GAAGTTAGCGATTATTTTTTACTGGAGAAACA 202679 29 100.0 32 ............................. TGACAACCAGATCCGAAAATCCTGGAGCCGGG 202740 29 100.0 32 ............................. ATTACATCGTTTTCCGGGTTTCGTTTGAGCAA 202801 29 100.0 32 ............................. ACCGATAGCAGCAGCATATTGCCCCCTAACGC 202862 29 100.0 32 ............................. TTCCATTGCGACATATTTATTAACCCTACTAA 202923 29 100.0 32 ............................. GAGGGGCCATGGAGCCGGTGTTGATTGCGTCC 202984 29 100.0 32 ............................. CGATTGTCGGTGGTTGTCTGCTGGTATCTGCT 203045 29 100.0 33 ............................. CGCCGGTCAGTGGTCAGGCAGGAAAAAAGCAGC 203107 29 100.0 32 ............................. GCGTTGTCGTCTAACCCGTCTAACCTGCGCGG 203168 29 100.0 32 ............................. CAGGGTCGCCGTATCCTTCGCCAGATGGCGGA 203229 29 100.0 32 ............................. TTACAAATCGCCTCGGGTGGTGCTCTGAAATA 203290 29 100.0 32 ............................. GAAATTCTGATTTTTTTACCGTGGATTTCCAC 203351 29 100.0 32 ............................. GCTATGGGAGTTAATGACATGGAACAGAAATT 203412 29 100.0 32 ............................. GCTCTTCTTCCTCCGCGAGTTCTGCATACGTG 203473 29 100.0 32 ............................. GATTCTAATTGACGTTGTAATAATCGTGTGTG 203534 29 100.0 32 ............................. ACTGATATCACCGAACTGGCTCGGGCCATGAA 203595 29 75.9 0 ...........ATTC...A......G..C | ========== ====== ====== ====== ============================= ================================= ================== 33 29 99.3 32 GTGTTCCCCGCGCCAGCGGGGATAAACCG # Left flank : GTGCTGTCTGCTGGCGAAATTGAACCGCCTCAACCACCGCCGGATATGCTGCCGCCGGCGATACCCGAGCCCGAGTCGATGGGAGATAAAGGGCATCGAGGGCATGGCTGATGAGTATGCTTATGGTGGTGACGGAAAATGTTCCACCTCGCCTGCGAGGACGGCTCGCAATCTGGCTGCTTGAGATCCGCGCTGGGGTATATGTTGGTGATACCTCAAAACGGATCCGGGAAATGATCTGGCAGCAGGTGATACAGCTAAGTGACGGTGGAAATGTCGTGATGGCCTGGGCGACAAACAGCGAATCAGGTTTTGAGTTTCAAACCTGGGGAGAAAACCGCCGTATACCGGTAGATTTAGATGGCCTACGACTGGTTTCATTCCTTCCCGTTGAAAATCAATGAGTTGGATGTTCTTTAATAATGTGAGATTGTTGTGATAAAGTTGGTAAATTGTTGTGTGCTTAAAAAGCTATTATAAAACAGTAATATATCTTTAGT # Right flank : CGTCCACTAACGTTATCGATCCGGAGGGTGGGCACGAAAGCTTGCGGAGAATAAATATCGCTACCTGCCGCTCTAGCGATATCACTGTTTTTTTACCGTCTCCTGGATCGCGCTAAAATCCGGCTCCGGGCAATCCCGACCAAAATTTTCGGCCCATGGGAACGGGGCGCCGTACTTAACATAGCGCTGATACAGGCGTTTGGTTAATTGAGCATCCCGCCCCCATACCCATCCTGTTGCATTACACAGCACGGCAGCATAGGCCTGTGATTTATATGGCAACAGGTCGGCCGCTTTTTCCGCCAGCGTCACCGCCTGCCAGCGATAGTGTAAGAAATGACTGTCCTGTTTTGGCAGGGATCGCTGAACGCGTTGCCGTTCGCCATCACTTATCCACGATGTCACGGCCGAATTATCTTCCGGTCCCTGGTTGTAATAGGGCCATGAATACCCGCCTCCATACAGCGCAAAATCGGGCGCCATCTCATAGCCTGTCAATT # Questionable array : NO Score: 6.22 # Score Detail : 1:0, 2:3, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.50,-12.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-7] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [76.7-48.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.92,0 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //