Array 1 46484-47426 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_WKQN01000013.1 Faecalibacterium prausnitzii strain BIOML-A1 scaffold13_size66444, whole genome shotgun sequence		Array_Orientation: Forward

  Position	Repeat	   %id	Spacer	Repeat_Sequence             	Spacer_Sequence                  	Insertion/Deletion
==========	======	======	======	============================	=================================	==================
     46484	    28	 100.0	    33	............................	CCCGATTGAAGTGCAGCAGCGCCTTGACTTCTT	
     46545	    28	  96.4	    33	..........................T.	TTATTTCAAGATGCTGACCGCAGAACATAAAGT	
     46606	    28	  96.4	    33	..............T.............	TGAATCGGAACTGCCGCCGTAAAACAGAAAAGG	
     46667	    28	  96.4	    33	..............T.............	CATTCACGAGTATCACCAGATGATGGCAACGGC	
     46728	    28	  96.4	    33	............A...............	CTTCCAGCGGTTCTGCCACCGGGCAATCTTCAT	
     46789	    28	  96.4	    33	..............T.............	AAGGTTCTTGTAGAAATGGCTTTCGTCCACGAA	
     46850	    28	  92.9	    33	..............T....A........	TTTCACGGATTTGATGACCCACCGATAGCTGCC	
     46911	    28	 100.0	    33	............................	CCGTGAAGCAAGACGGCACGGAATGACGATTGG	
     46972	    28	 100.0	    33	............................	CAACTCCAAAAAGAGCGTGTCGCTGGGCAATAA	
     47033	    28	 100.0	    33	............................	TGGCTTGCGCCCTTCCTCGTATCTCTTATTCAT	
     47094	    28	  96.4	    33	..............T.............	CCCGCTCGTCACTCGGCTTTATGCCCTTGCTGA	
     47155	    28	 100.0	    33	............................	TACCCAGAGCCGCCCGGCCCCCTGCTCCATCTG	
     47216	    28	  96.4	    33	..............T.............	TTGTAATGTCAAGTAGGTTTTGCATGTAATCAA	
     47277	    28	  92.9	    33	............T.T.............	TGAATCGGAACTGCCGCCGTAAAACAGAAAAGG	
     47338	    28	 100.0	    33	............................	TATCTGATGTTTGAGAACCAGACCTATGAAAGT	
     47399	    28	  89.3	     0	.......................TC.A.	|                                	
==========	======	======	======	============================	=================================	==================
        16	    28	  96.9	    33	CTTTTCCCCGCCCACGCGGGGGTGATCC	                                 	       

# Left flank :   TGTACCTGCTCCTGCTCAGTGAGGAACGGCCGGACCTGACCGCCCTGTGTGCGCAGTTCGGCACCGGTGCGCCCCCGGAGACCCGGCCCTATGACCCGCTGCTGGAACGGGTGACAGCAGGCAGCTGCTGGCAGTTCCGCCTGACTGCCAACCCCACCCGCAGCAAAAAAGACTCTGCCGACCATACGGCCCGGGGAACCCTGAAACCCTGCTATCTCGAGGTGGAGCAGGAGGAATGGCTGTGGGCGCAGGCCGCAAAGCACGGCTTTGCCGTCTCGGAGGGTTCGTTCGCAGTGACCCGGAAGCAGACCTATCACTTCAAGAAAAACGGCACCCGGCCCGTTACCCTGCTGGTTGTGACCTACGAGGGCATTCTGCAGGTGACGGACCCGGAGGCCTTCAAGGCCCTGCTGTGCGAGGGCGTTGGCCGGGGCAAGGCCTATGGCCTTGGCCTGATGACCATCATCCACAGGGGAGGAGACCATGGCTGAGATGCCGGG
# Right flank :  CATTGACAACCCTGCGCAAAAAGCAGATAATAGGTTTATCTTGAATGCAGAGCGAGGGAAAGTATATGCTGTATTTTGAAAACGATTACTGCGAGGGTGCGCATCCGGCGATCTTACAGAAGCTGGTGGAGACCAACTTTGAAAAGGTCTCCGGTTACGGCACCGATCCCTATTGCGCCAGTGCGCGGGAGAAGATCCGTGCGGCGTGCGGCGCACCGGATGCCGATGTCTGGTTCATTTCGGGCGGCACCCAGAGCAACGCCATCGTCATTGCATCGATGCTGCGCCGCTGGGAGGGTGTGCTGGCCGCATCCACCGGCCATGTGGCCGCTCACGAGGCCGGTGCCATCGAGTTCACGGGCCACAAGGTCATCGGCCTGCCGCACACCAACGGCAAGCTGGATGCCGGGACTGTTGAGGACTGGTGCAGGACCTTCTATGCCGATGGCAATATGGACCACCTCGTGTTCCCGGGCATGGTGTACATCTCCCACCCGTCA

# Questionable array : NO	 Score: 5.69
# 	Score Detail : 1:0, 2:3, 3:0, 4:0.85, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.58,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     CTTTTCCCCGCCCACGCGGGGGTGATCC
# Alternate repeat :   CTTTTCCCCGCCCATGCGGGGGTGATCC

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     R [2,6] Score: 0.37/0.37
# 	Reference repeat match prediction:         F [matched CTGTTCCCCGCACACGCGGGGGTGATCC with 96% identity] Score: 4.5/4.5
# 	Secondary Structural analysis prediction:  R [-12.60,-13.20] Score: 0.37/0.37
# 	Array degeneracy analysis prediction:      F [2-7] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: R [40.0-58.3]%AT Score: 0.27/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         F [4.91,1.01   Confidence: MEDIUM] 

# Array family : I-C [Matched known repeat from this family],   
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