Array 1 20504-21264 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAFHRV010000012.1 Klebsiella variicola strain Survcare013 NODE_12_length_75822_cov_5.26097, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 20504 29 100.0 32 ............................. CCTCTGAGGACGGAAAATTGATTACCGTTACC 20565 29 100.0 32 ............................. TTTGTCGTAATTTTCAACCATTGCGGCGAGTG 20626 29 100.0 32 ............................. CCCGTCAGGTCGAGCAGTCCTGGTTACTGCGT 20687 29 100.0 32 ............................. AGAGAAGCGGACGTAGTAAGGCTGGGGAGGTT 20748 29 96.6 32 .............T............... CGTTTTGACTCCCTGCAGGGGGAAGTGGACCT 20809 29 100.0 32 ............................. GCTCGCTGCCAAATTTGCCGTATAGCTCAGTC 20870 29 100.0 32 ............................. GTTTTGCGCAGCACGTAAACGTTGCCCTCCGC 20931 29 100.0 32 ............................. TAACGAGTACCGACAAAACGCGAGGTGTCTTG 20992 29 100.0 32 ............................. CAGAGCATCACACCAGAGCAATTCCGCGCCGA 21053 29 96.6 32 ............................A ATAAATCGCAGCGCGCGGATCCTTTTATTGTC 21114 29 96.6 32 ............T................ GAAACGTGGCCGTTAATGGGCTGATCGATGGT 21175 29 100.0 32 ............................. TCGAGGCGAAAATTTACGCCGGGCGTTTTCAT 21236 28 82.8 0 ...........TT..-.........G..C | A [21247] ========== ====== ====== ====== ============================= ================================ ================== 13 29 97.9 32 GTGTTCCCCGCGCCAGCGGGGATAAACCG # Left flank : GTGTTGTCGGCAGGCGAAATTGAGCCGCCTCAACCACCGCCGGATATGCTGCCTCCTGCGATACCCGAACCCGAGTCGATGGGAGATAAAGGGCATCGAGGGCATGGCTGATGAGTATGCTTATGGTGGTAACGGAAAATGTTCCACCTCGCCTGCGAGGACGGCTCGCAATCTGGCTGCTTGAGATCCGCGCTGGGGTATATGTTGGCGATACCTCAAAACGGATCCGGGAAATGATCTGGCAGCAGGTGATACAGCTAAGTGACGGTGGAAATGTCGTGATGGCCTGGGCGACGAACAGCGAATCAGGTTTTGAGTTTCAAACCTGGGGAGAAAACCGCCGTATACTGGTAGATTTAGATGGCCTACGCCTGGTTTCATTCCTTCCCTTTGAAGATCAATGAGTTGGATGTTCTTTAATAATGTGAAATTGTTGGGATAAAGTTGGTGAATTGTTGTGTGCTTAAAAAGCTATTATAAAACAGTAATATATCTTTAGT # Right flank : CGCAATTAACAATCAGGCGCCATCTCATAGGCTGTTTGATGGCGCAGGATCAGCACCGCTTGCCACCAGCCCTGCGCCTGAGCTTTTTTGTGTCCTTTTGTCGGCAAAGCATTGGTAAACGCCTGGGCGGCGTCTCTATCCTCAGTTAGCGCAAAATAGGCCAGAGCTTTTGCTACTGACCCGTGCGCATCAGGCGTCGTGCGAGCAGATTGCGTAGCCTGGCGTCGGCGCTTTCGCGCCCGGTATTTTTCGGCATATTAAGATCAGAAGGAGAAGGTGCCGGGACATATTTATCCACGAAAGCAATGAGCTCATTGACCGTTAGCACCCGTTCGGCAATGTGCGCGACATCCGGCCAGTAATTTTCTTTCGCCTGATACATCAACCACATCGCCTGCAGATAGTCGTCGCGGTTGAGCGCGAGTATCGCCTGCTCGGCGTGAATACGGCAGACCGGCGTCACAAATTCCTCGCTGATAATGTCATCACTAGACTGCTGG # Questionable array : NO Score: 6.16 # Score Detail : 1:0, 2:3, 3:0, 4:0.90, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.50,-12.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-8] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [75.0-46.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.92,0 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //