Array 1 10649-11037 **** Predicted by CRISPRDetect 2.4 *** >NZ_RHJJ01000010.1 Escherichia sp. E14V7 14V7_10_consensus, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 10649 28 100.0 32 ............................ ACATCATGAACGCGCAGCAAAATGCGGCTATT 10709 28 100.0 32 ............................ AATCCGGATATGGTGATTTATATCTACCCGCA 10769 28 100.0 32 ............................ GGTGCGACGGCAGCAGCCAGCTCCGGGACAGA 10829 28 100.0 32 ............................ CAGTCCGCCAGCTCGTTCGTGCCGCCTGATAA 10889 28 96.4 32 ..........A................. AAAAGATGTCCTCCTGCCGAGTACAGCGGAAT 10949 28 100.0 32 ............................ TAAATTTGAGGGTGAGGGTAAGCGGGGTTTCC 11009 28 92.9 0 ....................T...C... | C [11032] ========== ====== ====== ====== ============================ ================================ ================== 7 28 98.5 32 GTTCACTGCCGTACAGGCAGCTTAGAAA # Left flank : AGTTTATCGTCGAGTTGCAGGTTCAGTTGGATCAGAAAGGTGTTTCTCTGGAAGTGAGCCAGGAAGCGCGTAACTGGCTGGCCGAGAAAGGTTACGACCGGGCAATGGGCGCACGTCCGATGGCGCGTGTCATCCAGGACAACCTGAAAAAACCGCTCGCTAACGAACTGCTGTTTGGCTCGCTGGTGGATGGTGGCCAGGTGACTGTCGCGCTGGATAAAGAGAAAAATGAGCTGACCTACGGGTTCCAGAGTGCACAAAAGCATAAACCGGAAGCCGCGCATTAATCAGATTGTTAGGTAAGTTGATGAAGTCCGTAATCTCGTCAGGGGTTACGGACTTTTTGTTTATGGGGTGGAGGAAGTTCAGACCCTTTTTTTGATGATGATGGTAATTTGTTGATAATTAGTGCTGCTGGAAGGTAAGGATAAAAAAGGGTGGCAGCAGGAAAATGAGATGGTTTTGCTTTATTAACAACGGGCTAAACGTGTAGTATTTGA # Right flank : ATACGATGATGGCAGAAATTTAGCTGCGTTATGGCGTTCTCAACTCCGAACCATTAGCCACAACACGCAATAACAATTGTGATAATTGCGATAGAAATCAATTTCTCGCACAGAAATCAATGCTGTACTAATCCTAACTCCTTCAAATAAAAATAATCACAGGATGTGTTTATGTCTTCCAATTACCTTACTCCATCTGACCTCAAAACCATTCTCCACTCTAAACGCGCCAATATTTATTATCTGGAAAAATGCCGGGTGCAGGTGAATGGTGGGCGAGTGGAATATGTTACCAGTGAAGGTAAGGAGTCGTACTACTGGAATATCCCCATTGCGAATACCACGGTATTGATGTTGGGGATGGGAACATCCGTTACTCAGGCGGCGATGCGTGAATTTGCCCATGCCGGGGTGATGGTGGGCTTTTGTGGTACGGATGGCACGCCGCTGTATTCGGCAAATGAAGTTGATGTTGATGTCTCCTGGCTCAGTCCGCAAAG # Questionable array : NO Score: 6.19 # Score Detail : 1:0, 2:3, 3:0, 4:0.93, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGTACAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [8,6] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTTCACTGCCGTACAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.00,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-4] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [61.7-55.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.65,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 2 25472-26099 **** Predicted by CRISPRDetect 2.4 *** >NZ_RHJJ01000010.1 Escherichia sp. E14V7 14V7_10_consensus, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 25472 28 100.0 32 ............................ TCTTTCATCTCCTCCAGTCTCGCCCACGCAAT 25532 28 100.0 32 ............................ AATTCTATGCATACTAAATTATTGACACTGAA 25592 28 100.0 32 ............................ TTAAAAAGACCTTCCGTGGCTCAACATGTATT 25652 28 100.0 32 ............................ ATTCACGCAGGCGCTGAACACCGCGCGCGCAT 25712 28 100.0 32 ............................ AGAACGGCGACATTGTGGACGTATTAGTAATC 25772 28 100.0 32 ............................ AGATCTGCCAGCGCCTCTGCGGGGCGGTAAAC 25832 28 100.0 32 ............................ CGGCACCAGCAATGGAATTAGCGAAAAGCGGG 25892 28 100.0 32 ............................ GTGTACGCGCATTGGAGTAACCGCAATTAACT 25952 28 100.0 32 ............................ GTTCAATTATCAAATATTACCCGCGATATGAT 26012 28 100.0 32 ............................ TGCGATAACGAAGCTGTTGTTTCGTCGCCGTT 26072 28 89.3 0 ....................T..TC... | ========== ====== ====== ====== ============================ ================================ ================== 11 28 99.0 32 GTTCACTGCCGTACAGGCAGCTTAGAAA # Left flank : TCATCCCCGCCAGGCTGTGCAATATGCGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTAAAATATGGCGGTGAGGCGGGGATTCGAACCCCGGATACGTTGCCGTATACACACTTTCCAGGCGTGCTCCTTCAGCCACTCGGACACCTCACCAAATTGTTTTGCTGCCTGACCTCATGGGTGGCAACGGGGCGCTACTATAGGGAGTTGGAGTAAAACGGTCAAGAAGAATTTATAGAGATTGATTCGTTTGGTTACGCAATGAACACGCTGTTTGCGTGACGGAGATTATGACCGTATGTGTTCTGTTCAATTGTTTATCAAAAGCTATGCATAAAATATGAGATTGAAGAAGTACCAAATCGACCCTTTTTTTAGGTTGAAATGTAACTCATTGATTTTGTTTATTGCTGTTTTGAAGTCTGGAAAAAGGGTTTAAATCTGCGACTTTGTAAGTTTTAACAGTAAATCAATCGGATAGTCTGCTATTATTCCA # Right flank : ACTTAACTCACCATCCTCCAGTATTTATTCCCCGTAACTCCAAACGCAAAAAAGGCCGGTTAAACCGACCTTTTACTCGTTCTTTCTCTTCGCCCATCAGGCGGTAAAACAATCAGCGACTACGGAAGACAATGCGGCCTTTGCTCAGGTCGTACGGGGTCAGTTCAACAGTCACTTTGTCGCCCGTCAGGATGCGGATGTAGTTTTTGCGCATTTTACCGGAGATGTGTGCAGTAACCACGTGACCGTTTTCTAACTCTACGCGGAACATGGTATTAGGCAACGTTTCAAGAACGGTACCTTGCATTTCAATATTGTCTTCTTTGGCCATCTAATCCTCTGGGGTATCACTACCGTAATTTGAACCGGCAAGATAATGCCGAAGTTCTGTAAATAAGTAAAGATTTGTGCGCTAATTCGCAACAAACAGGTTTGGCACATAACTCCGAAAACACACGGCTAAGCCGCACTATAAGCGCAACGTATAAGGGAGCGGTGAG # Questionable array : NO Score: 6.21 # Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGTACAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [8,6] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTTCACTGCCGTACAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.00,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [68.3-55.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.92,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //