Array 1 1645768-1649755 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP007757.1 Halomonas campaniensis strain LS21 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 1645768 28 100.0 32 ............................ TGAAGAAAAAGGGCTGGGTGCGCGTCGATCAG 1645828 28 100.0 32 ............................ ATATCTCGGCGGGTATCCAGACACCACGGAAG 1645888 28 100.0 32 ............................ CAAGCGTTTGACGCGTTCATGCGTCACGGTGC 1645948 28 100.0 32 ............................ ATCGGCGGGCTTTTTACGTTCATCTTGTCTAG 1646008 28 100.0 32 ............................ CGCACAGATATCGTTATTCCAATTAACGTGGA 1646068 28 100.0 32 ............................ ATGGCGCGCGGCGCGTCTTCGGCGGGGTAGTT 1646128 28 100.0 32 ............................ TGAGCGATACCATTCGCTTAGGGCCCTCCCTG 1646188 28 100.0 32 ............................ AACTCAGCCGCCAGCAAGCCATCGCCCTGCTG 1646248 28 100.0 32 ............................ ACATGGCCGGGCTTCCTGTGTATCAGCGGAGA 1646308 28 100.0 32 ............................ CAAAGCTGAGCAGGCGGAATCTGGAGCTGACT 1646368 28 100.0 32 ............................ TATATCAGCGACTTCCCGTTCGACTTCCAGGG 1646428 28 100.0 31 ............................ GTCGGGGCGGGCGCCAGTTTGATTTGATCGC 1646487 28 100.0 32 ............................ CAGAACATCACGCAGGCTATTGCGGGCGGCTT 1646547 28 100.0 32 ............................ TGCGCAAGAAGGGCGGCCGCTTCGCCATGCGT 1646607 28 100.0 32 ............................ TAGAATGCTGTCGGTAGGCATGCCCGCAATGA 1646667 28 100.0 32 ............................ AGCCCGATCAACGTGAATGAAATGAGTGTCAT 1646727 28 100.0 32 ............................ AAGACGGCTAGCTCGCCCCTCAAAATGAAAGA 1646787 28 100.0 32 ............................ ACAGCCGCGCACCGTATGCAGGTTTTAGTGAT 1646847 28 100.0 32 ............................ AGCCGGAATGTTGAAGTTTATTCAAAAGTTAC 1646907 28 100.0 32 ............................ TGCTCGGCGGCCTGCTGCTCCAGCTTCTGACG 1646967 28 100.0 32 ............................ CAGCGCTTCCATGAAAAAGATTTTTTCGCCCT 1647027 28 100.0 32 ............................ ATATTGGCGGCAACGGATTCGCTAAATGGGAA 1647087 28 100.0 32 ............................ AGAAGCTCAATGCTCGCCGCGCTTCTGGTGCC 1647147 28 100.0 32 ............................ GCCAAGGGTTTCGCGTAGTAGATCCAGCACGT 1647207 28 100.0 32 ............................ ATTCCAACTAGCCCCCTGGAACGTACTTGCTT 1647267 28 100.0 33 ............................ GCCTGCTACCCGATCTTTTAACCGTTGCTGGCG 1647328 28 96.4 32 .................T.......... GTGGAGTGGTAGCGGAACAGCCCCAGAGATTG 1647388 28 100.0 32 ............................ AGCATCAACGTGCCGGTTTCAATCGCCGGGGC 1647448 28 100.0 32 ............................ AGCACCGAGATCCGCAGACTGACCGCCGAGCT 1647508 28 100.0 32 ............................ GCCTGCTTAATCAGGTCGCGGCGGGCCAGGCT 1647568 28 100.0 32 ............................ ATGACACTCGCCGAACTGAAAGCTAAATATAA 1647628 28 100.0 32 ............................ CTGACGTGCTACTGCGGCGGCTACCACTTCCC 1647688 28 100.0 32 ............................ GTGTTGTGGTCGGTGTAGCCGTTACGCATAGC 1647748 28 100.0 32 ............................ CTTGAGCGCTTCCAAGAAACCATTGGCGAGCA 1647808 28 96.4 32 ....T....................... GATGTACTGCTGTGCAGCCTGAGTGGCTTTCT 1647868 28 100.0 32 ............................ GTTCATCCGGCGCAATCGGGCCTCGACAGCCA 1647928 28 100.0 32 ............................ TATTGCCAGTGATGCAGAGATCAAGCGTTTAA 1647988 28 100.0 32 ............................ AGCTCACCGGCAAGAAAACCGGCATGCAGGCC 1648048 28 100.0 32 ............................ TCGGCGCACTCCGCCAGGTCATCGGCATGCAC 1648108 28 100.0 32 ............................ AAGCGAAAACGGTATTGACTCAGTGATACTTT 1648168 28 100.0 32 ............................ CTGCACCGTCGCCATCCTCGCCCTGGCCGGTT 1648228 28 100.0 32 ............................ ACGACTGCATTGGCGATGGCTTCGGCCATGCG 1648288 28 100.0 32 ............................ ACCAGGGCGGTGTCTTCGCGGTACCAGGGGTC 1648348 28 100.0 32 ............................ TCAAGCACTCACCATGCTGGATGAGAAAGTTT 1648408 28 100.0 32 ............................ ACGTTACCGAGGGTAGCCAGTGGGGGAGAGTC 1648468 28 100.0 32 ............................ GGCGCGCTATTTATCGCTTCTCCAACGCCGCT 1648528 28 100.0 32 ............................ TTAGAGGATTACCGCAAAACTGGGCGTTTCAA 1648588 28 100.0 32 ............................ TTAACTGATAACTGTAAAAGCTTAATACTGTC 1648648 28 100.0 32 ............................ ATGAGAATATCAAGCGCGCCCTGCCGGATACC 1648708 28 100.0 32 ............................ TGCCCTATGGCTCCATCAGTCATGCATTGGGC 1648768 28 100.0 32 ............................ AACATGGAACGCCGTAAAGCTGTGTGACGCTT 1648828 28 100.0 32 ............................ TACCACTTCGCCACGCTCAGGAGAAAACGGGT 1648888 28 100.0 32 ............................ ATTAGCGGCGCTCCTAAATTCGGGGTTTCACC 1648948 28 100.0 32 ............................ ACAGTTCGCGAGCCTCGGCCTTACTCCACTCT 1649008 28 100.0 32 ............................ AGCGCCCAGTCAGTCAGCCGCTTCTCTCGCGT 1649068 28 100.0 32 ............................ TCAGGGCACTCCAAGGCAAGAGCGCAAGCCGC 1649128 28 100.0 32 ............................ ATCGGGCCATGTTGTGGGGCACTCGATCATTA 1649188 28 100.0 32 ............................ TGCGTAAGAACAAGCGGCTTACGTCTGAAGTG 1649248 28 100.0 32 ............................ GGTATGTGGCTGACGGTTAGCTGGGTTGGCAT 1649308 28 100.0 32 ............................ ATGGACAACAACCAACGTTTAAAAGCTCTGCA 1649368 28 100.0 32 ............................ GGCTCGTTGATCAGTTCGGTGCGGCGGTCTAG 1649428 28 100.0 32 ............................ AAAAAATAAGCATTGGCTCTTTTCCTTGATCA 1649488 28 100.0 32 ............................ TCGTATAAAAAAGCCCTCGTATCGTGAGGGCT 1649548 28 100.0 32 ............................ ACATGACAACGACAGCACACGAAGACCAATAC 1649608 28 100.0 32 ............................ GCTGCCGTGACCGAGTGGGATGACAATCTCTC 1649668 28 100.0 32 ............................ ATGGAAGAAAAACGGCTTACATTGTAGCAGAC 1649728 28 75.0 0 .............A....C...TT.GTG | ========== ====== ====== ====== ============================ ================================= ================== 67 28 99.5 32 GTGCGCTGCCGCCCAGGCAGCTCAGAAA # Left flank : CGCGGTTGAAGCAACTGATGGGCGCTGACTGGCTAACTGGTATGCGCGACCATACACAAGTCAGCGAGCTGCTTGCCGTGCCTGAAGGAGCGAAGCATATCAACGTGGCGCGCAAGCAGTTCAATACGGGCAGTCCAAGCCGCGCAAAACGCTACGCTAAACGGCATAACATCTCAGAAGATGAGGCACGGCAGATCTATGCCAAGTTGGCTGAACGGCGTATAGAGCTACCCTTTGTACAGATCAATAGCCGTTCTACTCAACAGCGATTCAGCCTGTTTATAGAACATAGCAAAGCTCATGAAAACGCAGTGGCGGGTGCGTTTAACCACTATGGTTTAAGCAGTAACGCTACCGTGCCGTGGTTTTGACCCTTTTTTTCAGTATGAAAATAGGCAACCCATAATCAACCACTTAGCGGTGTCGCTCAAAAAAGGGTGATACCGCTTTTTTCCATCGAAGCTCTTTAACAATCAGCACATTAATTTTGATATGCTCTA # Right flank : GCTACCTGAAGCTGGTATCGCTGTGCAGTGCTTTCGCGGGTGCGCTAACGCTTACGCCGCGCTACTCGAAATGTGCATTACCTTCATTAATTAGTAAGTTGGATGTTGCCGTCCAGGTAATTCAGCGCTCAACAGTTGTGAATACTCTCTCAGTTTCGGCGTTATTAGCACGATGGTGCTTGAATTGTTAAATATGATGAGGAAGAGAATGTTCCAAAATAAAACTGCTTTAAGATAATAATTGCTGTGTGTGTCGGTAACTGCCATCTAGAGGATATTACGTCATGGAAAACTTTCTTGAGCAATTTGGGGCTTATGTTCCTTTGATCATCAATGCCGTGAAAGCATTGTTGGTGTTGATTGTGGGCTGGGTTGTTGCAGGGGTAGTCAGCAGCTTAGTGCGTAAGCGGGTGAACGCGATACCGCGTATAGACCCAACTCTGGGCAACTTCCTTGCAGCCTTGGTGAAGTGGGTCATTCTACTGGTTGTATTGATTACG # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGCGCTGCCGCCCAGGCAGCTCAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [6,3] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGCGCTGCCGCCCAGGCAGCTCAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.00,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-7] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [66.7-38.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.92,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //