Array 1 61429-59154 **** Predicted by CRISPRDetect 2.4 *** >NZ_JADNIM010000001.1 Flavonifractor plautii strain 1001302B_160321_F8 NODE_1_length_338596_cov_30.966, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================= ====================================== ================== 61428 33 100.0 34 ................................. CCTTTTTATACATCCATATCACCTCTATGTAATT 61361 33 100.0 34 ................................. CGCTTGCCCACCAGCTCGGAGAGCGCGTCCTCAC 61294 33 100.0 35 ................................. TTGTCCACAAGGCCGCGCAGCTTGGCGCGCATCTG 61226 33 100.0 37 ................................. GTGTCCCTGGAAATGGATGAGGAGCAGTTAGCCGCCA 61156 33 100.0 36 ................................. ACCGTGGCCACCAAGAAACGCCAGGCCCGGCTGGCC 61087 33 100.0 36 ................................. GCCTGGTCTCTCGCGCTCACTATCATCATCCTCCTT 61018 33 100.0 34 ................................. AATCTGGAATGTCCCATATTTATTGATACGAAAT 60951 33 100.0 36 ................................. GGCTAGTAGCGGAGGACCGGCGTGCATCTGCGGGGA 60882 33 100.0 37 ................................. GGTTATGTCAAGATTATCCGTTGACCAATGGCAAATG 60812 33 100.0 36 ................................. GATTCCACCCCTTGAGCTTCCACAGGACAAGCAGGC 60743 33 100.0 34 ................................. CGCCCTGCTGCGCTGGGCGATGGAAAATATCGGC 60676 33 100.0 34 ................................. AACGGCGTCCAGTCTCAGATGTGCAACATGGCCG 60609 33 100.0 37 ................................. AGCCCTGGCAATACGGTCACGGGGAAACAAAGGCAAC 60539 33 100.0 34 ................................. ATAGACGGCCCGGTCAGAGGCCAAGCGGAAGTCG 60472 33 100.0 35 ................................. CGCCCGCCTGGCCTGGAACACCCGCACGCCGATTC 60404 33 100.0 35 ................................. AGAGGTCTGAGCGTCCAGAGTGGCGGTCAGATAAC 60336 33 100.0 35 ................................. AGAGAAGGGGATTATGGCCGGCCGGGATGCCGATG 60268 33 100.0 34 ................................. CTTTGGGGTATCCCCAAATACACACCCGTTGTCC 60201 33 100.0 33 ................................. TTGCGTTGGCAATAAAAGCATCCATAATAAGCG 60135 33 100.0 37 ................................. GTTTGGCGTCATCTTGCGCCCTCCTCCCAATTTGCAC 60065 33 100.0 34 ................................. GGCCCCGTGCCGATTTTGAACCATGCGGCGGGGC 59998 33 100.0 34 ................................. CGCCTGCTGGACCGGACGCTGTCCAACGTGCGGC 59931 33 100.0 34 ................................. TTCAGCGACGCCCATCCTGTGGGTGACGGCACCG 59864 33 100.0 36 ................................. GTAAGGAGGCCCTGCTCCTGCTCAATGATGACATTG 59795 33 100.0 37 ................................. CCGGAGGAGGGCGAGGACGGCAAGATCTATGTGGCCG 59725 33 100.0 34 ................................. TAGAGCTTTGCTTTATGAACCTCGTACCGGGCTA 59658 33 100.0 34 ................................. TCCAGGATGGCGCTCTGGCCCTCTGCGAGCAAAT 59591 33 100.0 37 ................................. AATGGCGTCCAGTCTCAGATGTGCAACATGGCCGCTC 59521 33 100.0 33 ................................. CGCCACCCCTCATTGGTGCAGACATACCGCCGC 59455 33 100.0 33 ................................. CCAAAGAGCGGTTTTTTGTCAAGACACCGAAAA 59389 33 100.0 33 ................................. TGGTCAACAGTGGGAGTCAGGAAGCCGCTGCGG 59323 33 100.0 38 ................................. AGTGAGAAATACGACATCACCAAGCATCCCCGGTATAA 59252 33 93.9 34 ............A............G....... CAGCGGCTGGACCGCGGCCACATGGAGTATGTCT 59185 32 93.9 0 .................-.............C. | ========== ====== ====== ====== ================================= ====================================== ================== 34 33 99.6 35 GTCGCACCCCTCGCGGGGTGCGTGGATTGAAAT # Left flank : GGACGCCTATCCGCCCTTCTTGTGGAAGTGAGGCCATTATGCTGGTTCTGATTACCTACGATGTCAATACAGCGGATGCCGCCGGGCGCAAACGCCTGCGGCAGATCGCCAGGCAGTGCGTCAACTACGGCCAGCGGGTTCAGAACTCCGTCTTTGAGTGTAAGCTGGAGCCAGCCCAGTATAAACTCCTTCAGGCCAAGCTGTGCGCAATCATGGATCCCGAACGGGACAGCCTCCGCTTTTATTCCCTGGGAAATCGCTATGAGCAGAAGATCGAACACTTTGGCTGTAAGCAGACCTACCTTCCAGACGAACCTTTGATTTTGTAGCGTGCGAAGTCCAAGAGGACACGCCTTCTCCGGCCGGTTCGCACCCAAAAAGCATAAAGGAAAGCTTCATGGAGCATAGGCGCGTTTGTTTTCGTATGCTCAGCCTTCTTCCCCTTGTGCAAATAAGCAAATTGAGCCAAGCAAACTCCCTGCTCTTTGGTAAAGTTTGCT # Right flank : GTCTTACAGGGGCGCCTGGTCAGTTTGCAGGAGACGCCGCATAGGGGCGCGGGTCGATTCAAATTTTCACCCCGCGCCCCTGCTGTTTGCGTTTCTTTTCGTTGACTGGTATAGTAGGGAATGATATAATAGGATGATTATGACAAAAACTATGGTGGGAAGATCATATTATGTGGATTTCAAGTGACTGGAAGGACTATGAGCTGCTGGACTGCGGCGGCGGCGAGCGTCTGGAGCGCTGGGGCAAGTATCTGTTGGTGCGGCCCGATCCTCAGGCCATCTGGCGTCCGGAGGGGCGGCATCCCGGATGGCGGAGGCACGACGCCCGGTACCAGCGCGCCTCCACCGGAGGGGGCCAGTGGGTCAAGAAGGAACTGCCCCAGCGCTGGACATTGGGTTACAAGGGGCTGACCCTCAACATCAAGCCTATGAACTTCAAGCACACCGGCGTCTTTCCGGAGCAGGCGGCCAACTGGGATTTCGCCATGGAGCGCATCCGT # Questionable array : NO Score: 9.24 # Score Detail : 1:0, 2:3, 3:3, 4:0.98, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCACCCCTCGCGGGGTGCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: F [7,5] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCGCACCTCTCGCGGGGTGCGTGGATTGAAAT with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.90,-8.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [4-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [35.0-56.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.74,9.68 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //