Array 1 167855-171727 **** Predicted by CRISPRDetect 2.4 *** >NZ_VNFE01000006.1 Halomonas titanicae strain SM1922 HT_scaffold6, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 167855 29 100.0 32 ............................. CCGTTAAAATCCGGGCGCTTGAGCTTCTGAAT 167916 29 100.0 32 ............................. CCGCCCAGCGATGTGCGCGCGTAGTAGCTAAT 167977 29 100.0 32 ............................. CTGACCAGGCCGGATACCCACAGCGAGTAATG 168038 29 96.6 32 ............................T CCGGCAGAATCAGCCGCGAGCTCGGTCGGCGA 168099 29 100.0 32 ............................. CCGGGCAGCGGTTGAACGCCTAGCCGGTAAAA 168160 29 100.0 32 ............................. CCAACGCAGAGCGGATCGCCGTCACCGTCGGC 168221 29 100.0 32 ............................. TACTCGGATGAGTGACCTGCGTAGCGTTCAAA 168282 29 100.0 32 ............................. TCGCCACCGCCATCGCCGCAGATTCTGCCGCC 168343 29 100.0 32 ............................. CCTTTGATGGGTTCCCAATATTTGTAGATCAG 168404 29 100.0 32 ............................. ACTCTATTTTTTTAAGCATGAATGGATCTCTT 168465 29 100.0 32 ............................. CTGAGGGCGATAACGACAGTGGTAATCCAACA 168526 29 100.0 32 ............................. GGCTAGGTGTCGAGTCGATAGAGGGGCAAAAC 168587 29 100.0 32 ............................. ACGCTACAACTACTCGTTCTGGTGTCGTTGAA 168648 29 100.0 32 ............................. TCAGTACCGCCAGCATTAGCAGTCACAAGCTG 168709 29 100.0 32 ............................. CGATGTTCCAGTTTCAGAAGTCGCCCCAGCCG 168770 29 100.0 32 ............................. TAGATCTTGTCGCGCAGGTACTCCGCGAGCCG 168831 29 100.0 32 ............................. GGGAGAGTGGTAGTCCAATCTTTGATGATGAT 168892 29 100.0 32 ............................. GGCTAGCCGAGGTAGAGGGCTTTTGCGCTCGC 168953 29 100.0 32 ............................. ACTATAAGGGCCGGTTGGCAGACGGCCAGCGG 169014 29 100.0 32 ............................. ACTATAAGGGCCGGTTGGCAGACGGCCAGCGG 169075 29 100.0 32 ............................. ACTATAAGGGCCGGTTGGCAGACGGCCAGCGG 169136 29 100.0 32 ............................. ACTATAAGGGCCGGTTGGCAGACGGCCAGCGG 169197 29 100.0 32 ............................. ACTATAAGGGCCGGTTGGCAGACGGCCAGCGG 169258 29 100.0 32 ............................. CGCTCGACCGCATCATGGTCGGCTTTAACGGT 169319 29 100.0 32 ............................. CAACAGCAGCAAACCCCTGTTGCTATCCAGTA 169380 29 100.0 32 ............................. ACAGAATCAAGCTGGCACGTAAGCGAGCAGGC 169441 29 100.0 32 ............................. TGGCGCTGGCCAGCGGCTTCTTGCGGTCGAAA 169502 29 100.0 32 ............................. TCTCACCGATGGATGACAGTAAGAACGTTTAT 169563 29 100.0 32 ............................. CTTTAGCTTTAGGGTTGCCGCACCTGTCGCGC 169624 29 100.0 32 ............................. GGGTGTATGCCTGCCATGCTTTCTGTTGGCTC 169685 29 100.0 32 ............................. TATTTTGTCTTATCACAAGCTCTTTTAAAGTG 169746 29 100.0 32 ............................. ACTAGGCCCGGATAGGTCGGACTCAGATAACA 169807 29 96.6 32 ............................T ATCAACCAGCGCGCCACCGGCTAACCAGGGCA 169868 29 100.0 32 ............................. CAGCTACGGGCTGACCTTAACCGGCTGTTGGG 169929 29 100.0 32 ............................. CCGACTGGAGCACTCTTTGAACGGGTTGATAA 169990 29 96.6 32 ............................T GTATGAAGCTGCTCGGGGTTGCGCTTTAGCTC 170051 29 100.0 32 ............................. CGTATTTCATCGAGCCCTACACCTGTAAACCT 170112 29 100.0 32 ............................. AAGGGACACCGGTCACGCTACCGCCGCCACCG 170173 29 100.0 32 ............................. ACGGTTTCAGTGAATGCAATGTGCGTGATTTC 170234 29 100.0 32 ............................. AGGGCGTCATTCATGGGCCTATCGATTAGCTC 170295 29 100.0 32 ............................. TTTTAGCGCTCAACCGCCTATAGCCACACCAA 170356 29 100.0 32 ............................. ATTTAGCTTTGCCTGCCCTTTCTTCCTGTAGT 170417 29 100.0 32 ............................. GGCCGTGAAATGATCGTGGCTGCGAAGGATGA 170478 29 100.0 32 ............................. TCGGGTTGCGCGTAGTTGTCTGCCCAGGCAGT 170539 29 100.0 32 ............................. TTGTTTTCTGGCGTCTTACCGTCAGGCTCTAC 170600 29 100.0 32 ............................. CAAACGACCAAGACAGGAGATGACCATGCCAC 170661 29 100.0 32 ............................. TGTACAGAGATGGTCTTTGGTATTGGCGGTAA 170722 29 100.0 32 ............................. CACGTGGAGAAAGTTACGCTGGTCAAGTAATG 170783 29 100.0 32 ............................. TTGGCTTCTGCCGCAGAGCGTAGATTGCTCAT 170844 29 100.0 32 ............................. CATTTAGAACAGGGCCGACAACATGAAAGCGA 170905 29 100.0 32 ............................. TTAATCCTATGGTTGGGTGGTATCGCTGTCAC 170966 29 100.0 32 ............................. CTGCTGTTGAAGCCTATCGAAAGAAGTTTGGT 171027 29 96.6 32 ..........................T.. TCAGCGCTAGATTCTGCTTTGTTGTTCGGGGC 171088 29 100.0 32 ............................. GCGCTGCCGGGGGTGCAGTTGTGTGTTGCTTG 171149 29 100.0 33 ............................. GAATATCGCGCCTGTGACGCTCTACAGCAAACA 171211 29 100.0 32 ............................. GTGATTTCAGTCGAGAAAAACGATTGATGGAT 171272 29 100.0 32 ............................. GCACCAGGCACATAATTGACGGCAAAATCTAT 171333 29 100.0 32 ............................. GCGATAAGGGGATAGCCGATATGTGTTCCGGT 171394 29 96.6 32 ....................T........ GAACTCATGGATCAGCAGGCGGGCATTACGTC 171455 29 100.0 32 ............................. GAATGCTTAGCTCACTTTACGAACTAGGTGTC 171516 29 100.0 32 ............................. ATCTGCAGGGCGAGTTCCGACGCGGCCATCTT 171577 29 100.0 32 ............................. CCGCGCTACCGCGTGTATGCCTATGAGACTGA 171638 29 96.6 32 ............T................ AGGTGTTCGTAATGGCTGAATTAGCAGGCAAT 171699 29 72.4 0 ...........G.TTATA.......G.T. | ========== ====== ====== ====== ============================= ================================= ================== 64 29 99.2 32 CCGATCCCCGCACGAGCGGGGATGAACCG # Left flank : TGGTGATATTCAGCCGCCACCACCAGCACCTGATGCAGTACCGCCTGCGATTCCCGAACCACCTTCGGTCGGCGATGCCGGTCATAGGAGCGGATAAATGGCGATGCTTGTAGTGATTACAGAAGCCGTGCCGCCACGTCTACGTGGCAGGTTAGCAGTGTGGCTCTTAGAAATTCGAGCTGGTGTTTATGTTGGAGATGTTAGCAGGCGTATTCGTGAAATGATTTGGGAGCAGGTCGAGGCGCTAGCCGAAGATGGCAACGTGGCAATGGCCTGGGCCAGCAACCATGAATCCGGTTTTGAATTCCAAACCTATGGAGAAAACCGCCGAGAACCCGTCGATTATGACGGGTTACGTTTGGTGCGCTTTTTGCCACCACAAGTTAACTAGCTGATTTTATTGGATCTTTAATAATTTAGCCTGATTAAAAAGTAAGCAAAATAGCTGGTAGAATTTTATCTGCTATTTTCTTCTTGTAGATCAATCATCTACAACAAGT # Right flank : GCTCATGTGGCGAAAGAACCTCATTGAGATAGATGGTCGTGGTTAGGCCTGAGATATGTGCCAGTGGCACCGCTGTGCGGGTGCACTGACGCTACTCGATGTGTTGCTTGGTTGTTTAACTTTGCGTGCAAAAGCCACCGTGTTAGTGGCTTGTCTGGTGAGTTTAGAAAACGCTAAGCCTTAGTCTTCTTGTGGGGGTGTTTCCATGGCGCGTTTGTCGTCGGGTACGCGGACGATGTGGCCGACTTCGAGTTTGTGATGGCTTTGGTGGCGGTCGCCTTTGGTGTCGATGATGGCGGCGACTTCGCCGATGCTGACGGCGTCATCTTCTCGGTAGGCTTCTACTTTGACGCGCACCATGGCGCCTTGATAGCGGGCGGAAATAATGTCGCCTGGGTCGGGGGCGTTGTGATCAGGGTCGTTTTTAAAGTACTCAGCTACGCTGGCGCTGCCGGGTTCGTCCCATTCGATATGCTGGTGCATCGCTGTCTTCCTTGTGT # Questionable array : NO Score: 6.22 # Score Detail : 1:0, 2:3, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CCGATCCCCGCACGAGCGGGGATGAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [6,2] Score: 0.37/0.37 # Reference repeat match prediction: F [matched CCGATCCCCGCACGAGCGGGGATGAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [-12.70,-12.70] Score: 0/0.37 # Array degeneracy analysis prediction: F [1-11] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [70.0-51.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //