Array 1 3240462-3243111 **** Predicted by CRISPRDetect 2.4 *** >NZ_OV049808.1 Klebsiella pneumoniae strain DJ isolate DJ chromosome DJ_, complete sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 3240462 29 100.0 32 ............................. GAGCAGGCACCCGCCGCAACGACGAAGAGCGC 3240523 29 100.0 32 ............................. AAATCAGCCAGCACCACGATTCTGGGAAATTT 3240584 29 100.0 32 ............................. ACAGGCTTACCCGTATTGAGACGGTTGCTGAA 3240645 29 100.0 33 ............................. GAAACCCCATCAGATGACCCTCCCCATGTTGGC 3240707 29 100.0 32 ............................. TTGCCTGGTCTGCTTGGTGATGATCCGTGGTA 3240768 29 100.0 32 ............................. TACAGAACGACTGAGGCGGCGTGTATTGCATA 3240829 29 100.0 32 ............................. GATCTTAACTCTATTGCCAATGGCGCAATTCA 3240890 29 100.0 32 ............................. GGCGATGCGCGCTCTGCTGGCTATCGGTAAAA 3240951 29 100.0 32 ............................. AATGCAGCAACCGGCAAATATATCGCCGGTAA 3241012 29 100.0 32 ............................. GGGCTGCCGCACGCCTGGGACGAGTCGAGCCC 3241073 29 100.0 32 ............................. CCGCAATAACAAAAATAAATGAGGGTTAAAGT 3241134 29 100.0 32 ............................. GTAAATGGGAATGAGTAGAAGAGCGTCATTGG 3241195 29 100.0 32 ............................. CCCCCGCGCACATGCTTAAACGCGCTATCACG 3241256 29 100.0 32 ............................. GGCATCTGTTGTGTAATGTTGAGTTTTTTTCA 3241317 29 100.0 32 ............................. CAGGTTAAACATGTAAAAAATGACCGTCGCCG 3241378 29 100.0 32 ............................. CACATTGCCCGGTCTGAAAAGTATTTGAAAAT 3241439 29 100.0 32 ............................. TCCGCACAGTCAAACGCTCCAGACACCAACCC 3241500 29 100.0 32 ............................. CCGGAACACCACCAGTAACAGCTACTGTAGGC 3241561 29 100.0 32 ............................. TGACCCTGTTGATTTTGTTCCAGGTAATACGT 3241622 29 100.0 32 ............................. TTAACCTCGTCGTTCTGGTTTCCGCCCAGGAT 3241683 29 100.0 32 ............................. GAACCTGAATTCGAAGGGTGGGTCATCCTTCC 3241744 29 100.0 32 ............................. GGACCCCGAGCGACCCGGTCACCCTCCGACCT 3241805 29 100.0 32 ............................. CCGTCGAACGGCGGTTATATCCATCTTGAGTC 3241866 29 100.0 32 ............................. ACCGATCCCACAATTGCGGCGGTTGAGATTGA 3241927 29 100.0 32 ............................. GTTGGTAATTACTGCTGTGTGTTACGGATAAA 3241988 29 100.0 32 ............................. CCGATTGTCTGGCGGTCGAGCGCCATTTGCTC 3242049 29 100.0 32 ............................. TGCCGGACGTTGTACCTGTGAGTTAATTCTTC 3242110 29 100.0 32 ............................. CGATAACCGGGCGTTTCGACTGAACTCACCTC 3242171 29 100.0 32 ............................. TTAATACCAGGGGGCAGGTTCAGCAGGTCCCC 3242232 29 100.0 32 ............................. CCGCTTTAACCCGCTCCGGCAGATCCGGGTGA 3242293 29 100.0 32 ............................. CCCTCCGCTTTCAGGGTGTGGCTGATATCACC 3242354 29 100.0 32 ............................. CGCGCTGCGAATTTGTTGGTCGATTTCGATCT 3242415 29 96.6 32 .............A............... TGGGTAGAGGTTAACTGGTTATTGGTCATTGA 3242476 29 100.0 32 ............................. ATCGCGGAGGCCTTCGGTGTGTCTCTTTCCTG 3242537 29 100.0 32 ............................. CCGTTGTCAATATCTCCCGGCGTCCGCGCCAG 3242598 29 100.0 32 ............................. CACGTCCGGAAACCACGGGTTATCCGTGTAAT 3242659 29 100.0 32 ............................. CAGAGGTCCTTATCTTTTCAACGTCAAAGTCG 3242720 29 100.0 32 ............................. GCAATCCCAGAGCGCGAATATCTTGGGCTCTC 3242781 29 100.0 32 ............................. GACATGGCGCGCGAGTTTATCGACGCCTGCGC 3242842 29 100.0 32 ............................. GGGATGAGCGTTTTCCGGTGGATTCTGATGTG 3242903 29 100.0 32 ............................. GTGATCGTCATGGATATCACTGCCGTTCCGTC 3242964 29 100.0 32 ............................. CAGACAGACAGCAGGCAGCAAACAGGGAAGAC 3243025 29 100.0 29 ............................. GGGTTCACTTGGGTGAAACTGAACTAACT 3243083 29 75.9 0 ...........ATTC...A......G..C | ========== ====== ====== ====== ============================= ================================= ================== 44 29 99.4 32 GTGTTCCCCGCGCCAGCGGGGATAAACCG # Left flank : GTGCTGTCTGCTGGCGAAATTGAACCGCCTCAACCACCGCCGGATATGCTGCCGCCGGCGATACCCGAGCCCGAGTCGATGGGAGATAAAGGGCATCGAGGGCATGGCTGATGAGTATGCTTATGGTGGTGACGGAAAATGTTCCACCTCGCCTGCGAGGACGGCTCGCAATCTGGCTGCTTGAGATCCGCGCTGGGGTATATGTTGGTGATACCTCAAAACGGATCCGGGAAATGATCTGGCAGCAGGTGATACAGCTAAGTGACGGTGGAAATGTCGTGATGGCCTGGGCGACAAACAGCGAATCAGGTTTTGAGTTTCAAACCTGGGGAGAAAACCGCCGTATACCGGTAGATTTAGATGGCCTACGACTGGTTTCATTCCTTCCCCTTGAAAATCAATGAGTTGGATGTTCTTTAATAATGTGAGATTGTTGTGATAAAGTTGGTAAATTGTTGTGTGCTTAAAAAGCTATTATAAAACAGTAATATATCTTTAGT # Right flank : CGTCCACTAACGTTATCGATCCTGAGAGTGGGCACGAAAGCTTGCGGAGAATAAATATCGCTACCTGCCGCTCTAGCGATATCACTGTTTTTTTACCGTCTCCTGGATCGCGCTAAAATCCGGCTCCGGGCAATCCCGACCAAAATTTTCGGCCCATGGGAACGGGGCGCCGTACTTAACATAGCGCTGATACAGGCGTTTGGTTAATTGAGCATCCCGCCCCCATACCCATCCTGTTGCATTACACAGCACGGCAGCATAGGCCTGTGATTTATATGGCAACAGGTCGGCCGCTTTTTCCGCCAGCGTCACCGCCTGCCAGCGATAGTGTAAGAAATGACTGTCCTGTTTTAGCAGGGATCGCTGAACGCGTTGCCGTTCGCCATCACTTATCCACGATGTCACGGCCGAATTATCTTCCGGTCCCTGGTTGTAATAGGGCCATGAATACCCGCCTCCATACAGCGCAAAATCGGGCGCCATCTCATAGCCTGTCAATT # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.50,-12.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-8] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [76.7-51.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.92,0 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //