Array 1 213368-213040 **** Predicted by CRISPRDetect 2.4 *** >NZ_AHBZ03000023.1 Pseudoalteromonas citrea strain DSM 8771 contig023, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 213367 28 100.0 32 ............................ GATACCACCAATGCGGTAGTAAGCGAAGCCGC 213307 28 100.0 32 ............................ GGTTGAATTTTGTTGTTTGCTGTGGTGCTGTT 213247 28 100.0 32 ............................ AGTATTGCTCTGTGGCTTTTGCTAGTTTTGTA 213187 28 100.0 32 ............................ TTGAAAATTGGCGTGCAAGAAACCCAATAGGA 213127 28 100.0 32 ............................ ACGCGTAGCAACGCACGCAGACGGCCTAAAAT 213067 28 89.3 0 .........................GTG | ========== ====== ====== ====== ============================ ================================ ================== 6 28 98.2 32 GTTCACTGCCGCACAGGCAGCTTAGAAA # Left flank : ACGACACCATGCGTGTAATCAACGTTAATCACGTAGAAGATGCGATTGCACCAGTTGTATATACAATCCCATTACAGCTCTTGTCGTATTACGTCGCGGTGATTAAAGGCACCGATGTTGACCAACCTCGTAACCTAGCGAAATCGGTCACGGTAGAATAACGGAATCCATTTCATACTGGTCCATTAAGGTATGGATTGCGCTGTAGGCGAAGGTTTATCCTTCGCCTTTTCTCTTTGTTAATACCTCCCATACAGGTCAAAGCTTTGTATTTTCAGCACTGCAATGAATATCCAATGTAGCTATAAAATCATGCGTGGCGATCTGCAATCATTCGTGTCATTATTTGTTCGAAAAGGTGAAAAAACACCCTTCAATTTTTAGCTCTTTAAAAAATCCATATAAAACAATGGCCTAAGTTTCATTGGTTTTTAAAGGGTAAAATGTAAGTTTTATTGGTAACGTTATGATTTAATTTAAGTTTACCAAAATAGTTCATT # Right flank : ATGAGTGGCCGAAACGCTTTCGTTTTATAAAAAGTGCAGCACGAAGAAGTGAGGTTATGGATGACCGATATAACCAAGCTCTACGGATAGATTATTCACGCAGTCGAGACTGTTTTGTGGACCCTGAAACAAGTTCAGGGAGACGAATCTTGGTTGAGTTTAACGCTTATGGATAGCTTTGATATGCGCGGCATAAAGCCCCGCCAACGAGGGAGGGTCCACACAATTCGTCTTTCTGACGAAGGTCAGAATCCAGAGTTTTAAAGCGTTGGCTTACATCGTTGAACCTAATCCATGCAAGTAACGCTTGATGTAACCCAGCTCCAAGGATGAATTGTTCACGCAGTAGAGGCTGATTTATGGACCCTGAAACAAGTTCAGGGAGACGAATCTTGGTTGAGTTTAACGCTTATGGAAAGCTTTTATATGCGGGGAATAAAGTTCCTCTAACGTTTGAGGGTCCACACAATTCGTCTTTCTGACGAAGGTCAGAATCCAGT # Questionable array : NO Score: 6.17 # Score Detail : 1:0, 2:3, 3:0, 4:0.91, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGCACAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [5,8] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTTCACTGCCGCACAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.70,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [3-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [56.7-80.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.92 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 1 838298-838745 **** Predicted by CRISPRDetect 2.4 *** >NZ_AHBZ03000027.1 Pseudoalteromonas citrea strain DSM 8771 contig027, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 838298 28 100.0 32 ............................ AGTATCGTTTGCAACTAACAACGCTATTTTTT 838358 28 100.0 32 ............................ ATCAACCCCAGACCGTTCTGGTACAGATCCCA 838418 28 100.0 32 ............................ CATACCATCATCTATCATGTGATAACCCATAC 838478 28 100.0 32 ............................ TTCATCCCAATTTTCCCCGTATTACTTTGCTT 838538 28 100.0 32 ............................ ACTCGTCACACCAAAATTTATACCTGGCGCAA 838598 28 100.0 32 ............................ ATTTCAGCAAGTGCTGCAATGGTGCTTTGTAG 838658 28 100.0 32 ............................ TCCTAGGTCTAAACCCGCTAAGTTTGTATCCT 838718 28 89.3 0 .........................GCG | ========== ====== ====== ====== ============================ ================================ ================== 8 28 98.7 32 GTTCACTGCCGCACAGGCAGCTTAGAAA # Left flank : CATTGATATACATTACCTTGGTGTAAAAATCGCATTGTCCACTGCCGCACAGGCAGCTTAGGTGCCTAGGGGCTGGGCGTTTTATGCCTGGTACTAGTCCACTGCCGCACAGGCAGCTTAGGTGATGAGTGACCGAAACGCAGTTTCGCAGCGCGAAGAAGTGAGGTCATGGATGACCGATGTAACCCAGCTCCATGGACGGATTTAAAACGCTGAGGTTAGTTTTAGCAAAGGCTGTAGTGACTACTTTTTGGACCCTGAATCAAGTTCAGGGAGACGAAGGAGTGGTTATGTTATGAACTGTCGCAAAGGTAGTTTGATGTGTTTGGGTAAGGTGCAATGAGTTAAAAGGGTAAATACCCTTTAAAAACCCTTTATTTTTCGCTCTTTAAAAAGTCACTATAAAACAGCAAGTTACAATTGGTCGTTTTTTATATGGTTAAAATAGTATTTTGGCCGTAACGACTTGTTGTAACTTATTTTTATGATGATAGTCTATT # Right flank : GATGAGTGACCGAAACGACGTGTTTTGCAGAGGGTGCAGCGCGAAGAAGTGAGGTCATGGCAGGTTTTTTGTTCCCGACAAAACCTAAGTACCTGCATCCATGCAGGCAACGACCGATGTAATCCAGCTCCATGGACGGCTTTAAAACGCTGAAGTTAGTTTTATCTATTCACTGCCGCACTGGCTGTAGTGACTACTTTTTGGATCCTGAAACAAGTTCAGGGAGACGAAGGGGGGGACGTTGTGTATATGCGCGGCATAAAGCCTCGCCAACGAGTGAGGCCCACACAGTTCGTCTTTCTGACGAAGGTCAGAATCCATGATTTGAACGTATTAGACTAAACTGCTTTGCTTAACTCATAGACCCTGAATCAAGTTCAGGGAGACGAAGGGTGGTTATGTTAGCGCACTGTCGTCAACGATTAGCTCTAATTATTCGCGGCATAAAGCCTCGCAAACGAGTGAGGCCCACATAACTCGTCTTTCTGACGAAGGTCAGA # Questionable array : NO Score: 6.20 # Score Detail : 1:0, 2:3, 3:0, 4:0.94, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGCACAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [8,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTTCACTGCCGCACAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.00,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [73.3-45.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.92,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 2 849270-850978 **** Predicted by CRISPRDetect 2.4 *** >NZ_AHBZ03000027.1 Pseudoalteromonas citrea strain DSM 8771 contig027, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 849270 28 100.0 32 ............................ AAGACTTCACTAACCTACGGTTTTATAAATAC 849330 28 100.0 32 ............................ AGTCGCAATTATGGGCTATGAAAATATACGAC 849390 28 100.0 32 ............................ TTAGCAGCATCAGGGCTTATACCACCACCTGA 849450 28 100.0 32 ............................ TGACCTTGCAACATTCCAAACAATGCGAAGTG 849510 28 100.0 32 ............................ TTGCTGCATCGCCTTACTTGCACAGCATAAAA 849570 28 100.0 32 ............................ AATTAGCCACTCTAGGCGCACATAACTACATG 849630 28 100.0 32 ............................ GCGAGCGCGGTTGTGGTAACAGAACAACAGAG 849690 28 100.0 32 ............................ ACGCTTGAACAAAATTGCGCGGTGGTACTCAA 849750 28 100.0 32 ............................ CATACCAGACAGCACATTACCCAGCCCAACCA 849810 28 100.0 32 ............................ AATACGCAATTGCTATCACTGCTTGCTGGCGC 849870 28 100.0 32 ............................ ATTCTAGGCGCACATAACTACATGCTAACCCT 849930 28 100.0 33 ............................ GTGCTTAGCAATGTACGCGCTTTACGTTCAATT 849991 28 100.0 32 ............................ TGCAGAATATTTGAGGGTGAATACGAGTATTG 850051 28 100.0 32 ............................ TACACACCACCAAGCCCCGTCAATCAACCCTC 850111 28 100.0 32 ............................ TTTCTGGCTTGCGTATGTCGATAATACATTGT 850171 28 100.0 32 ............................ GCGCAAATATGCGCCGGTATACCCGGCTAAAA 850231 28 100.0 32 ............................ CAATTAAGCAGGGTGATAACGAGATCACAGAA 850291 28 100.0 32 ............................ GCTCTGATTACGATTGGGTTGGTGAAGCAGAG 850351 28 100.0 32 ............................ GTATCAGCAAGCTTTGCTAGCTCTTCGATTAT 850411 28 100.0 32 ............................ AATGGGGTCGTTTGCGGCCACTTCACCTAATA 850471 28 100.0 32 ............................ ATTTGGGGACAATGGCGAGATGGTAGAAGTTC 850531 28 100.0 32 ............................ TAAAATAGGACTTGCAGTTATGGTTACTATTT 850591 28 100.0 32 ............................ TAACTTCAAAAATCTAGCTTCATTCGGCCTTT 850651 28 96.4 32 .............T.............. GCCCATTTAACACCAGCCTAAATATATGTTCG 850711 28 96.4 32 ..C......................... TTAGCCTCTGCGACCGTATCTTGTATTTTTAC 850771 28 100.0 32 ............................ AGGTCAATTGCTCACAATTCCTTTATCAATCG 850831 28 100.0 32 ............................ TAAGGGTTGCTATACAGTCGATATCCGCTCTA 850891 28 100.0 32 ............................ ATTGTTTAAATTTCGATAAACTCTTACCTTGT 850951 28 89.3 0 .........................GTG | ========== ====== ====== ====== ============================ ================================= ================== 29 28 99.4 32 GTTCACTGCCGCACAGGCAGCTTAGAAA # Left flank : GAGTATGCCTACTTTAAGCGTAAGAACTTTAAGTCACCGGCAAAACTAATAAAAGAAATAGATTCGCGAGCAGCAAAAATTGCCGCCAAAAATGGTTTTGATTTGGCAAAAGTTAAAGAACGTTTAATGGTATCTATAACAAAGCTTGAAGAGCGTTCAACTTTACCTTATATCAACTTACGTAGTCTTTCATCTGATAAATTACTCAGTGCAGAAGATCGAAAAAAGTTTTTGTTGTTTATTGAATGCGAAATTGTCACACAACCACTTAATCAAATAGGTTTATTTACATGTCATGGCTTAAGCCGACGTTCTGAAGAGGAGCAATCGGCAGTGCCTTGGTTTGAAGGGTAATAATACCCTTTAAAAACCCTTTATTTTTCGCTCTTTAAAAAGTAACTATAAAACAGTAAGTTACAATTGGTCGTTATTTATATGGTTAAAATGGTATTTTAGCCGTAACGACTTGTTGTAACTTATTTTTATGATGATAATCTATT # Right flank : GATGAGTGACCGAAACGAAGTTTCGCAGCGCGAAGAAGTGAGGTCATGGATGACCGATGCGTACTAAGCGCGGCATAAAGCCCCGCCAACGAGCTAATTACCTGCATCCATGCAGTTAACGACCGATGTAATCCAGCTCCATGGGCGGATTATTCACGCTATATTGGATGCTTTATGGACCCTGAAACGAGTTCAGGGAGACGAAGGGGGGTTGCATTGTGGCGCGCGGCATAAAGCCCCGCCAACGAGTTAAGTACCTGCATCCATGCAGGCAACGACCGATGTAATCCAGCTCCATGGGCGGATTATTCACGCTATATTGGATGCTTTTTGGACCCTGAAACGAGTTCAGGGAGACGAAGGGTGGTTGCGGCGGACCTAAGTACTTGCATCCATGCAGGCAACGACCGATGTAATCCAGCTCCATGGGCGGATTATTCACGCTATATTGGATGCTTTTTGGACCCTGAAACGAGTTCAGGGAGACGAAGGGTGGTTGC # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGCACAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [8,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTTCACTGCCGCACAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.00,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-5] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [75.0-46.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.92,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 3 944266-945075 **** Predicted by CRISPRDetect 2.4 *** >NZ_AHBZ03000027.1 Pseudoalteromonas citrea strain DSM 8771 contig027, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 944266 28 100.0 32 ............................ CGCCGCCTCTCCCCCGGGGGAATCAATATCAA 944326 28 100.0 32 ............................ TAGCGGGTATTTTGTAAATAATCTAACAAACA 944386 28 100.0 32 ............................ GCTATGACCAACGAGCAAGCACAGCTAATAGA 944446 28 100.0 32 ............................ AAATTTTGGCAACCCAAACATACCTCGCTAGA 944506 28 100.0 32 ............................ ACAGACATTTATACTCAAGCATACTTAAACCC 944566 28 100.0 32 ............................ ATCTAGAACCAACAACCCGCTGTTGCGAATTT 944626 28 100.0 33 ............................ GAGCCTTTAAAAAACCAATTATCGTACCATTTT 944687 28 100.0 32 ............................ TACTTACGCACTTTTCTGCACAGTTGGCCCCA 944747 28 100.0 32 ............................ TCGAGGAGATGTTTGGCCATTTTCCCATTGTT 944807 28 100.0 32 ............................ AATGTCACGTCTGACTCTGCTACATCTTACTC 944867 28 100.0 32 ............................ TTTCATGCTGTCGCTAAAGCTTTTCTGGGTCA 944927 28 100.0 32 ............................ GCTATAATACAAAGTAGCGGGGCGCTTGTGGT 944987 28 100.0 33 ............................ ACATACTTTAATAGTGGACTCTAGTCCCATTTT 945048 28 89.3 0 .........................GTG | ========== ====== ====== ====== ============================ ================================= ================== 14 28 99.2 32 GTTCACTGCCGCACAGGCAGCTTAGAAA # Left flank : CCAACGGGCAAGGTGAAATGGCATGCTCCCCTTATACTCCGTCTTTCTGACGAAGGTCAGAATCCATAGTGTTTAGAAATAAGATAAGTCATGGGGCTAAATGGTGTGTAGCTGAATTGACATGGACCCTGAAACCAGTTCAGGGAGACGAAGGGTTGAATTTTCTTAGCAACTTTTAGCCTTTATATATGAGGTATAAAGCCCCGCCAACGGGCAAGGTGAAACGACATGCTCCCCTCATACTCCGTCTTTCTGACGCAGGTCAGAATCCATTTTAGTATTGAGTGTGTCGTTAACTATGCGATGAAATCATTGATGGTGCAGTTTCAGTTTTCATGTCATTATTTGTACGAACAGATGTAAAAATACCCTTTTATTTTTAGTTCTTTAAAAAATCATTTAAATACAATAACCTATGTTTCCTTGGTTTTTATAAGGTAAAAATAGGTATATTGGGGTTAAGCTTCTGATTTTAATTGACTTAAGATAAATTGGTTATT # Right flank : GATGAGTGACCGAAACGAAGTTTCGCAGCGCGAAGAAGTGAGGTCATGGATGACCGATGTAACCCCGCTCCAAGGACGGATTACTTACACTTTAGAGGCTGTTTTATGGACCCTGAATCAAGTTCAGGGAGACGAAGGTGTGAAATTTTCCATATGCGCGGCATAAAGCCCCGCCAACGAATCTTAGGTGATGAGTGACCGAAACGAAGTTTCGCAGCACTTCGATGTGAGGTCATGGCAGGTTTTTTGTTCCAGACAAAACCTAAGTACCTGCATCCATGCAGGCAATGACCGATGTAACCAAGCTCCAAGGATGGATTGCTCGCACTGTAGTGGCTGTTTCGTGGACCCTGAATCAAGTTCAGGGAGACGAAGGTGTGAATTTTCCATATGCGCGGCATAAAGCCCCGCCAACGGGCAAGGTGAAATGGCATGCTCGCCTCATACTCCGTCTTTCTGACGAAGGTCAGAATCCATAGTGTTTTGAGCTAGGATAGGTC # Questionable array : NO Score: 6.22 # Score Detail : 1:0, 2:3, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGCACAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [8,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTTCACTGCCGCACAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.00,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [75.0-50.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.92,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //