Array 1 47-873 **** Predicted by CRISPRDetect 2.4 *** >NZ_AVCC01000038.1 Herminiimonas sp. CN cn_00038, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ===================================== ================== 47 37 100.0 34 ..................................... ATTTTGGGAACATAGGTTGGACGGATAGGACCAA 118 37 100.0 33 ..................................... CCAATGGATACTGTGCCTCAACAAATTCCTGTG 188 37 100.0 34 ..................................... CATTGAGCAAGTGGCATTGGTGAGTGGGCATCGA 259 37 100.0 35 ..................................... GGCCTGCACGTGGATCGTTTGGATGCCGAGACCGG 331 37 100.0 36 ..................................... CGGCCTGAGCACATCGGTTGCCGAGGGTGTGCAGAC 404 37 100.0 34 ..................................... CGACGCGGTAGCGGATCACAACAAGACCACGCTT 475 37 100.0 36 ..................................... ATCGTCCGCGACCGCGTCACGTCGGCAGTGCTGGCG 548 37 100.0 34 ..................................... ATCTTAGTTAAGGAGCCTGCGGCAAGGTCTGCTG 619 37 100.0 35 ..................................... ATCACGCCGTACTGCGAAATGGATCAGGTCATCAC 691 37 100.0 37 ..................................... TTGGCGCCTTCGGTCGCCGCATACGCCTTCACGCGGG 765 37 100.0 35 ..................................... GATGACTCAGGCGGATTTTGCTGCACTCCCTGAAG 837 37 89.2 0 ................G.......T.C.A........ | ========== ====== ====== ====== ===================================== ===================================== ================== 12 37 99.1 35 GTATCGCCCGGCCAATTCGCCGGGCGTGGATTGAAAC # Left flank : GTGGATTGAAACGAAAACCGCACGGTCTGACCCTCCGGCCCCTTCAG # Right flank : CCACCAGTCACGATGGCTGGATGATCGTTAAACTTTGCGTAGTTCTGCGCAGAATATGGCAAACTGCGGGCTCGCCTTGGGAGTCGCATATTGAGTATCTTGAAAAACCTGCCGTTTGAATGGTTGGTCGGCCTGCGGTATACCCGTGCCGGGCGGCGCAGCGGCCGCAACAGTTTTATTTCCTTCATTTCGCTGATTTCGATGGCTGGCATCGCGCTCGGGGTGGCGGCGCTGATCGTGGTGCTGTCGGTAATGAACGGCTTCCAGAGGGATGTGCGCGACCGCATGCTGTCGGTGCTGGCGCACATCGAAGTGTTTGACGCCAGCGGCGCGATGGCCGACTGGCAGGGCACTGCGAAGCAGGCGCTGCAGGACAAGGAAGTCATCGGCGCGGCGCCCTATGTGGCCACGCAGGCGATGCTCACGCGCGACGACATCCTGCGCGGGGTGGTGATTCGCGGCGTGCTGCCGCAGCAGGAACGGGCGGTGTCGGATGTGGC # Questionable array : NO Score: 6.21 # Score Detail : 1:0, 2:0, 3:3, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTATCGCCCGGCCAATTCGCCGGGCGTGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [7,7] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-16.20,-17.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-4] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [31.7-51.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.91,0.64 Confidence: HIGH] # Array family : NA // Array 1 25033-26215 **** Predicted by CRISPRDetect 2.4 *** >NZ_AVCC01000043.1 Herminiimonas sp. CN cn_00043, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ===================================== ================== 25033 37 100.0 34 ..................................... TTGCTGGCGGCAATGGCGTAATCGATTGCATGAT 25104 37 100.0 34 ..................................... AGGAAGTGCATGCGAAGGTGCGCAAATTCATGAG 25175 37 100.0 33 ..................................... AGGCGTCATGACTCGATCATCCGAGTCGCACAG 25245 37 100.0 34 ..................................... CTCGAAGCTGTCATCCATGCCGGCGAAAATCATC 25316 37 100.0 33 ..................................... TGGTTAATCTTGGGAGCATTAAATAATGGCAAA 25386 37 100.0 35 ..................................... TGATTTCAGCATTTTCATTTTCCTTTGCGTATCGT 25458 37 100.0 35 ..................................... GGGATGACCAAAACGGCATGGCATCTGGTGCGGGT 25530 37 100.0 36 ..................................... ATAGATACCTGACCCCCGACGAGCAGCAGCGCCTGA 25603 37 100.0 37 ..................................... TTCATGGGAGCCATCATATTGCTGCATCATTTTTTAA 25677 37 100.0 34 ..................................... ATGAAGTCGAGCGGGTTCGTCTCGATAGACTGGC 25748 37 100.0 35 ..................................... TCCATGCAGGCGGCGACCATGACGCCATCGTGACG 25820 37 100.0 35 ..................................... CGGATGATACTGCCCGTCCCTGCCACGCCTAGTCC 25892 37 100.0 35 ..................................... AGCCCGTAGGAATCTTCGGACATCGCTGTATAGAC 25964 37 100.0 35 ..................................... AGCCGGCGCAGCATTCGGCACGTTGACCGCAGTGG 26036 37 100.0 35 ..................................... CAGAGATTTGACCCGCCCCTCCTGCCGCTCGTCCA 26108 37 100.0 34 ..................................... CAGCGGTGACCAGATGATCAATTTCTCGGCCTTG 26179 37 100.0 0 ..................................... | ========== ====== ====== ====== ===================================== ===================================== ================== 17 37 100.0 35 GTATCGCCCGGCCAATTCGCCGGGCGTGGATTGAAAC # Left flank : TATCTGCCTTATCTGGCGAAATAGGAAGCCCCCATGCTCATCATCATCACTTACGATGTCTCCACTGAAACTGCCGCCGGCCGTAAGCGATTGAGACGGGTTGCCAAAGCCTGCGAAAGCATGGGACAGCGCGTGCAAAAATCCGTATTCGAATGCACCGTCAACGAAATGCAATTCGAACAACTGGAGCGCACACTGCTCGCCGAAATTGACGAGACAGTGGATAATTTGCGCTTCTACCGCATTACCGAACCGGTGGACCTGCGGGTCAAGCAACATGGCTGCTTTCGCTCAGTAGACTTTGAGGGTCCGCTCATTGCTTGAGCGCGAACGGCTATCAACGGCCAACATGCAAGGCATTCGCGCAGGAGCTAACCTGATGATAAATATGATATTTTCACGCGAAACGAAATTTTTCAGAAGGAATCTACGGTGTTCTGGAGGACGTTCGCGGGAAAATGCAGAAATTTTCTTATGTAACAACGAGTTATGTGAGTGAA # Right flank : TGCTGCCACTGGGCACCATCACCACTCGCCTTCGGTAGTCGCC # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:0, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTATCGCCCGGCCAATTCGCCGGGCGTGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [7,7] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-16.20,-17.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [60.0-25.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.77,0.37 Confidence: HIGH] # Array family : NA //