Array 1 109473-113400 **** Predicted by CRISPRDetect 2.4 *** >NZ_UKHP01000007.1 Klebsiella pneumoniae strain EuSCAPE_FR007, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 109473 29 100.0 30 ............................. CTCACGCTGATACCTCGGAAAAAGACGGGC 109532 29 96.6 32 .G........................... GCGGGCTGGGTTTTGTCGACTCTGCCGATCCG 109593 29 100.0 32 ............................. TAATATTGATAAATTCGATGAAGTAACCGGAA 109654 29 96.6 32 ............................A TCGAAGTACCAGCGCCGCACCGTGTTTTTTGC 109715 29 100.0 32 ............................. GTGGCCGGTGCTGCCAGTACGGTTACCGAAGT 109776 29 100.0 32 ............................. CATCCACGCTTCTGGCCACCAGGCAGATAATC 109837 29 100.0 32 ............................. GTGCTCCTCTTCCAGATACTGGGCCAGGAGCT 109898 29 100.0 32 ............................. TACAGGACGACAGCATCCTGGAACATTTCGAC 109959 29 100.0 32 ............................. CTCTGCGTGTGCGCCTCCGCTACGAGGTGACG 110020 29 100.0 32 ............................. TGAATATTCATTTACTAAATTAGAGACAATTC 110081 29 100.0 32 ............................. CGGATTAAACGTAAGGCCGCGCGCTGGCGTAA 110142 29 100.0 32 ............................. GTGGTTTGTTACCGTGTTGTGTGGCAAAAAGC 110203 29 96.6 32 A............................ GAACGGAGGAATATAAGAACAAAAGCCCGCAG 110264 29 100.0 32 ............................. TAAACCGCTGGCGTGGTCAGTTGCGTGGCGGT 110325 29 100.0 32 ............................. GGCGCCGGCCTGATCACTATCGGGTAACGGTG 110386 29 100.0 32 ............................. GGCCTGAACCAGAGCATGATCTACACCTGGAA 110447 29 100.0 32 ............................. ATTGGGTAGAGCAGGCGAACGGATGTCTTTTT 110508 29 100.0 32 ............................. TTTTCACGGTCGAAGTTGTGCATGCTTTCTGC 110569 29 100.0 32 ............................. TCGACGCCCCGGTGTGGGAAGACTTTGGCACC 110630 29 100.0 32 ............................. CAGCGCATACGGGTTAAACCGGATCACCTCTT 110691 29 100.0 32 ............................. ACATAGCGCCCGATACGCAGCGCCAGCGGGTA 110752 29 100.0 32 ............................. GATCGATCGTTATTGTTGAACCGCACTATGGT 110813 29 100.0 32 ............................. CTTTTAATAATATCATCGGCAATGTCCTTATC 110874 29 100.0 32 ............................. CGGGACCGGATCCGCGTGGGCGACCAGGATTA 110935 29 100.0 32 ............................. CACCGATATTCAGTGCGCCAACGCCATAGCAA 110996 29 100.0 32 ............................. CCGAGGTTTTTCATACCTTCGGCAGTCGTAGA 111057 29 100.0 32 ............................. CGGAAATTTTGATTAGTTGAATCTGTGCCATT 111118 29 100.0 32 ............................. CCGACTTGGGACGAGGATCCGGCGGAATGTCG 111179 29 100.0 32 ............................. TAATGGCAAAACCATGACCTGATCCGGGCGTC 111240 29 100.0 32 ............................. CCTGAATCTTCACTTCGTCGATCATTCTGCGC 111301 29 100.0 32 ............................. GGTCAAAAGGTTCATTCGAGCATCGAGTTGCA 111362 29 100.0 32 ............................. GTAACGCAGACGGCGAACGTCGGATCCATTGG 111423 29 100.0 32 ............................. GACCAGAAAGCCTGGGCATTGTTCCGCTCATT 111484 29 100.0 32 ............................. CCCCCGGCCGCGTGGCCGATTGCCATTACCGC 111545 29 100.0 32 ............................. TATACAGTATTATCATAGCGAATTCCCATCGG 111606 29 100.0 32 ............................. GTTGGTAATTACTGCTGTGTGTTACGGATAAA 111667 29 100.0 32 ............................. GCACCAACGTTTACGGTGCGGTGGTGAAACAA 111728 29 100.0 32 ............................. TGCCGGACGTTGTACCTGTGAGTTAATTCTTC 111789 29 100.0 32 ............................. CGATAACCGGGCGTTTCGACTGAACTCACCTC 111850 29 100.0 32 ............................. TTAATACCAGGGGGCAGGTTCAGCAGGTCCCC 111911 29 100.0 32 ............................. CCGCTTTAACCCGCTCCGGCAGATCCGGGTGA 111972 29 100.0 32 ............................. CGCGCTGCGAATTTGTTGGTCGATTTCGATCT 112033 29 100.0 32 ............................. TGGGTAGAGGTTAACTGGTTATTGGTCATTGA 112094 29 96.6 32 ........T.................... ATCGCGGAGGCCTTCGGTGTGTCTCTTTCCTG 112155 29 100.0 32 ............................. CCGTTGTCAATATCTCCCGGCGTCCGCGCCAG 112216 29 100.0 32 ............................. CTGCAGGTAAATGACTGGATGGGGGAAGAGGT 112277 29 100.0 32 ............................. CACGTCCGGAAACCACGGGTTATCCGTGTAAT 112338 29 100.0 32 ............................. CAGAGGTCCTTATCTTTTCAACGTCAAAGTCG 112399 29 100.0 32 ............................. GCAATCCCAGAGCGCGAATATCTTGGGCTCTC 112460 29 100.0 32 ............................. GACATGGCGCGCGAGTTTATCGACGCCTGCGC 112521 29 100.0 32 ............................. GGGATGAGCGTTTTCCGGTGGATTCTGATGTG 112582 29 100.0 32 ............................. TCCCCTACCACCCACTGAGCAAACTGGTAGCA 112643 29 100.0 32 ............................. CAGATACCAACGGTTACTACGGCAATCAGCAC 112704 29 100.0 32 ............................. AAGGTTGACCTGTTGTCGGCAACCATCGAGCC 112765 29 96.6 32 .........A................... GAGGCGCGCGTTGTCGTCGGTGAGATGCGCGA 112826 29 96.6 32 .....A....................... GCCATTCGTGCTTCTTCGCTTTGCTGCATCCA 112887 29 100.0 32 ............................. GAATATAAAACCAGATTCCATATAGCCCTGTG 112948 29 100.0 32 ............................. CCGGTTACGGGGATGACTGCAATTCGCTCCTG 113009 29 100.0 32 ............................. GGTCAAAAGGTTCATTCGAGCATCGAGTTGCA 113070 29 100.0 32 ............................. GCGGCGTCAGGTGTGTGGCAGAAAATTATTGC 113131 29 100.0 32 ............................. TCGTCTGAGTTCCGGCTTACGCCGTGCCGACA 113192 29 100.0 32 ............................. GTGATCGTCATGGATATCACTGCCGTTCCGTC 113253 29 100.0 32 ............................. CAGACAGACAGCAGGCAGCAAACAGGGAAGAC 113314 29 96.6 29 ............T................ GGGTTCACTTGGGTGAAACTGAACTAACT 113372 29 75.9 0 ...........ATTC...A......G..C | ========== ====== ====== ====== ============================= ================================ ================== 65 29 99.3 32 GTGTTCCCCGCGCCAGCGGGGATAAACCG # Left flank : AGGTGCTGTCTGCTGGCGAAATTGAACCGCCTCAACCACCGCCGGATATGCTGCCGCCGGCGATACCCGAGCCCGAGTCGATGGGAGATAAAGGGCATCGAGGGCATGGCTGATGAGTATGCTTATGGTGGTGACGGAAAATGTTCCACCTCGCCTGCGAGGACGGCTCGCAATCTGGCTGCTTGAGATCCGCGCTGGGGTATATGTTGGTGATACCTCAAAACGGATCCGGGAAATGATCTGGCAGCAGGTGATACAGCTAAGTGACGGTGGAAATGTCGTGATGGCCTGGGCGACAAACAGCGAATCAGGTTTTGAGTTTCAAACCTGGGGAGAAAACCGCCGTATACCGGTAGATTTAGATGGCCTACGACTGGTTTCATTCCTTCCCGTTGAAAATCAATGAGTTGGATGTTCTTTAATAATGTGAGATTGTTGTGATAAAGTTGGTAAATTGTTGTGTGCTTAAAAAGCTATTATAAAACAGTAATATATCTTTA # Right flank : CGTCCACTAACGTTATCGATCCTGAGAGTGGGCACGAAAGATTGCGGAGAATAAATATCGCTACCTGCCGCTCTAGCGATATCACTGTTTTTTTACCGTCTCCTGGATCGCGCTAAAATCCGGCTCCGGGCAATCCCGACCAAAATTTTCGGCCCATGGGAACGGGGCGCCGTACTTAACATAGCGCTGATACAGGCGTTTGGTTAATTGAGCATCCCGCCCCCATACCCATCCTGTTGCATTACACAGCACGGCAGCATAGGCCTGTGATTTATATGGCAACAGGTCGGCCGCTTTTTCCGCCAGCGTCACCGCCTGCCAGCGATAGTGTAAGAAATGACTGTCCTGTTTTAGCAGGGATCGCTGAACGCGTTGCCGTTCGCCATCACTTATCCACGATGTCACGGCCGAATTATCTTCCGGTCCCTGGTTGTAATAGGGCCATGAATACCCGCCTCCATACAGCGCAAAATCGGGCGCCATCTCATAGCCTGTCAATT # Questionable array : NO Score: 6.22 # Score Detail : 1:0, 2:3, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.50,-12.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [3-11] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [78.3-53.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.92,0 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //