Array 1 8913-10345 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAEUYT010000143.1 Escherichia coli strain 111 NODE_111_22_length_71331_cov_25.6437/1-71331, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 8913 29 100.0 32 ............................. TTTCAGAAAAGTACGGCTCAATTGATCGCCCC 8974 29 100.0 32 ............................. CGCTGGTGGCGGAAAACAGCCAAAATAACGCA 9035 29 100.0 33 ............................. TGGATTAATCCGCGGCTGGCGATATCTCGCAGC 9097 29 100.0 32 ............................. CCCCTGTCGCCGTTGGCGGATTCTTTCCTGTA 9158 29 100.0 32 ............................. CGATAAACGCTCAATACCAGCCGGAATAATCG 9219 29 100.0 32 ............................. GCGGAATCTGCTGCGCACAAGTTACACGGCGC 9280 29 100.0 32 ............................. CCTTGATCGGATTCCAGAAACGAACCACTAAA 9341 29 100.0 32 ............................. TCGTTTAGTGTGGAATTTGGCGACGCGGAGCG 9402 29 100.0 32 ............................. TTTAGCTAATATTGGGCGGCTAACGTCATCAA 9463 29 100.0 32 ............................. GTTAAATATTGTTCACCATCATGGATCAGGAA 9524 29 100.0 32 ............................. CATGAACATGGACGATGAAAAAATAAGGGAGG 9585 29 100.0 32 ............................. CATGAACATGGACGATGAAAAAATAAGGGAGG 9646 29 100.0 32 ............................. CATGAACATGGACGATGAAAAAATAAGGGAGG 9707 29 100.0 32 ............................. CATGAACATGGACGATGAAAAAATAAGGGAGG 9768 29 100.0 32 ............................. AATTAAATGATTTTGATGCGCGCCGACTTGAA 9829 29 100.0 32 ............................. CCACGCGGCTGCATTCAGTGATATCCAGTTTG 9890 29 100.0 32 ............................. CATCTATTTATCTCGCCGCGATTGGCGATAAC 9951 29 100.0 32 ............................. CCGAACGGCTGGCGAAGCAGGTGGCTGGCGTA 10012 29 100.0 32 ............................. GTTTACCGCCCCGCAGAGGCGCTGGCAGATCC 10073 29 100.0 32 ............................. GGATGACCTGTCGCTAAAACTCGCCGCGTACA 10134 29 100.0 32 ............................. TCCGTTTGGTCCACCAAATGTTTGATGCTTCA 10195 29 100.0 32 ............................. TTCAGGGTGTGATTCCGCATACCAAGCAGTAA 10256 29 96.6 32 .A........................... GGCGCACTGGATGCGATGATGGATATCACTTA 10317 28 72.4 0 .AA........C..T....A..-.C...C | T [10336] ========== ====== ====== ====== ============================= ================================= ================== 24 29 98.7 32 GTGTTCCCCGCGCCAGCGGGGATAAACCG # Left flank : GTCCTTGCTGCAGGTGAAATTGAACCACCACAACCCGCGCCGGATATGTTACCGCCTGCCATCCCTGAACCTGAAACGCTGGGTGATAGTGGTCACCGGGGGCGCGGCGGATGAGCATGGTCGTGGTTGTTACAGAAAATGTCCCTCCGCGCTTACGTGGACGGCTCGCAATCTGGCTACTGGAAGTGCGTGCCGGTGTGTATGTTGGTGATACATCAAAACGTATTCGGGAGATGATCTGGCAGCAAATTACCCAACTGGCTGGTTGCGGAAATGTGGTGATGGCCTGGGCGACCAATACCGAGTCGGGTTTTGAATTTCAGACCTGGGGAGAAAACAGACGTATTCCGGTGGATTTGGATGGGTTACGTTTGGTTTCTTTTCTTCCTGTTGATAATCAATAAGTTAGACGTTCTTTAAAAATAAGGAAATGTTTTAATTTAGTTGGTAGATTGTTGATGCGGAATAAATTTGTTTAAAAACAGTTATGTATGCTTAGT # Right flank : CAGCTCCCATTTTCAAACCCATCAAGACGCCTTCGCCAACTCCTTCACCAGAGGTAGCATTATCCGCATAACGTCACGGCAGCGACGTTCTATTCTTCCAGGAAGTGCCTTATCAATATGCTGTTGATTATCCAGTCTTACGTCATGCCAGCTATTTCCCGCAGGGAATGCGGCTGTTTTTGCGCGTTGCTGATAACCATCCTTATTCCCAAGATTCCAGTTAGTCGCTTCCACCGAAAGTACAGCAATGCCCGCTTTGTCGAATATTTCTGCGTCATTACAACACCCAGTGCCTTTCGGATAATTTTTATTCAAACCCGGATTGGTCGTTGCGGCTATTCCGTGACTGCGTGCAATTGCCAGCGCCCTGTCGCGCGTTAATTTCCTTACTGCTTCAGGGGTTTTTACACCGCTGTTGAAATACAATTTATCGCCAACAATTAAGTTATCGAGATTAATCACCAGCAGCGTATTTTTCTTTTCGGTGTCACTCATCCGCT # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.50,-12.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [71.7-43.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.92,0 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //