Array 1 394716-398155 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP042251.1 Geobacillus thermoleovorans strain ARTRW1 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ======================================== ================== 394716 30 100.0 39 .............................. TTGTTGCCCCTCCCCGAACACTTCCTCAACCTGCTCCAA 394785 30 100.0 37 .............................. CTCCGCGTAATTCGCTGTCTGTTTGCGTTTGCGCCGG 394852 30 100.0 37 .............................. AATCCTCCGTGATGTTTCCATAGCGAACGGTCTTGCT 394919 30 100.0 37 .............................. TTTCATTCATCATTCTACGTACTTAGACGACGAAAAG 394986 30 100.0 36 .............................. ACATGGGCAGTCGGCAACGCGGTGACACGAAAAGAC 395052 30 100.0 39 .............................. CAACAAAGAGTCCGACGACGATACGCTTGAGATCATCGT 395121 30 100.0 36 .............................. CTTTTTGCAACGTCCGGGACCGCAAAAACGATAGGT 395187 30 100.0 34 .............................. GCAATACCTTTGAATCCAACCTTGCTGGATAAAG 395251 30 100.0 39 .............................. TTTGGTCCATGATCGAAAAGATAATAAACGGCGCCGACT 395320 30 100.0 36 .............................. TTCGTTGGATGACGTCGAGATTGTCACGGTTCCGTC 395386 30 100.0 38 .............................. GGTTCTTGTGACAGAATGCCAACTTGTACAGCGGCATT 395454 30 100.0 35 .............................. GCAGCGCCGGTTGTCGAGGTGTACCTTGCGATTGA 395519 30 100.0 38 .............................. CGGCGACAACGGGAAACGAATCATTACGGACATAATCC 395587 30 100.0 38 .............................. CACTTGTAGAGCTAGAAGGTTCCCTTCGGAATACGATG 395655 30 100.0 36 .............................. GATTGGTGAACTCCGGTCTTACCGCGGTGATGCTCC 395721 30 100.0 35 .............................. GTTGGTATCTGCGAAGTGGTCGCGTATCCAACGTC 395786 30 100.0 37 .............................. CCGTGGCAACCGTGGTACATGGAACTATTCGGAAATA 395853 30 100.0 38 .............................. AACTGGTGGCAGGAGCAAATATTTCTCTTACTCCAGAC 395921 30 100.0 35 .............................. TGCACCAAAATAGACCTGGCGATGACGCTAAGGAA 395986 30 100.0 40 .............................. TTGAATCCCGTTGATTATGTACAACGCCAAGTGCTGAAAA 396056 30 100.0 36 .............................. CAAGCATTGGAGGGAAAAGAATGATCTACATCTTGC 396122 30 100.0 35 .............................. TCGCTGAAACAGCTGACTCGGTACAGTGAAGCCGA 396187 30 100.0 36 .............................. ACACAACGGTACGGACATATCAGCTGACGCCGGAGC 396253 30 100.0 35 .............................. TCCACGCTTGTAGTGAAAACAACAGCCGGAACTAC 396318 30 100.0 40 .............................. GCCGAGGCCGAGGCGAAAGCGTTGGTGAAACTATTGCCCA 396388 30 100.0 39 .............................. GCATCTCGTTCCGGATGCGTGTCAGCACATTCAGCACAT 396457 30 100.0 36 .............................. AGGCTCGCTATGGCTACGACAACATCAGTGGAATAC 396523 30 100.0 36 .............................. TTATATCATCATTTGGTGATTTGTAAACATCTTTTC 396589 30 100.0 35 .............................. CAATCTCAAAAACTCGGTTGCGATCATCGAGCGAT 396654 30 100.0 38 .............................. CGTTTCCCAGCTCGAAAAAGTGGCGCAGAAGCAACAAA 396722 30 100.0 38 .............................. CTATTTCCCCAAGCGTGTGCTGGCACGCTGCAAGCATA 396790 30 100.0 38 .............................. CATTCGATATATGGACGACGTCATTGTACTGCACGAAA 396858 30 100.0 37 .............................. ACCAAACAACTCAACCAATTTTTTAAAACTAATTCCC 396925 30 100.0 36 .............................. ACCGTCTACCCATTCAACAAGAAAGGCTGTTTTTCT 396991 30 100.0 35 .............................. TAAGCGTCTGTCAATGTTTCTTGACGTTCGCTTTC 397056 30 100.0 40 .............................. TCTATGAAACCCTTCGTACCGAAGAGAAACAGCGGTACTA 397126 30 100.0 39 .............................. TGATCGCTCTGGCCGCAGTTAACTTATTAAATTTATCGA 397195 30 100.0 34 .............................. TGAAAATCAGCAGATATTGCAAAAGCTCGAGGAA 397259 30 100.0 36 .............................. CCTCAACCACTTTAAGTGTCTTTTTGAGGTCGCCCC 397325 30 100.0 39 .............................. CGGGTTTTGTTGGTTCCGGAAAGTCGTACAATGCTACAC 397394 30 100.0 38 .............................. AAATTTTTCAATATCCCCCTAATATAGCTCCATCTCCG 397462 30 100.0 38 .............................. AAGATATTGCGATCAACGAGGCGGTCGAACTGGATAAG 397530 30 100.0 40 .............................. ACGGACGAGATGCCCGTAAACAAACCTGTTTTGGCTTTCA 397600 30 100.0 38 .............................. TCTTGTCCGGCTTCGAAGCCGAAAACCAGCCAAGATTC 397668 30 100.0 35 .............................. TCCTTTCAAATTTTGGTCAAAGACACAGACCAAAT 397733 30 100.0 36 .............................. GTGACAAACGGGCTTGCAAGTAAGAAACTAGCGATT 397799 30 100.0 36 .............................. TCTCTAGAAATAGAGGTGAAGGAAATTGCAAAACGT 397865 30 100.0 34 .............................. GCTCGAGATTTTCGATATGGTCAATCAAGTTCAT 397929 30 100.0 36 .............................. ACCTTTAGCTCCTTCGCTGTGTCTCGGAAATTTGTC 397995 30 100.0 37 .............................. CCGTTTGACCTTTATAATATTTTGGCTGTTATCAATG 398062 30 96.7 35 ................C............. CGGAGTCGGCCGCTTTCTCCACGCGTTTCCGCCCA 398127 29 73.3 0 ......G...CG.....A..A.-GC..... | ========== ====== ====== ====== ============================== ======================================== ================== 52 30 99.4 37 GTTTTTATCGTACCTATGAGGGATTGAAAC # Left flank : AAGAGGAGGAAGCAAAACGGCGAAACGAGGTGAGCCAAATGGAAACGAAGGAAGCAAAGCGTGTGATGGAGCTCATCGTCTCATACGAACAGCGGGGGCTGGAAAAGGGAATCCAACAAGGAATCGAACAGGGGATAAAGCAAGGGATGAAGCAAGGGATGAAGCAAGGACGCCAAGAAGGGATCGAGGAAGGGAAGCTCGACGTGGTGAAGAGAATGCTGGCGAAAGGATACGATGTCGACACGATCCACGAACTGACCGGACTGCCGGTTGAGAAGATCGAACGGGTGAAGGGGTAAGCAGAGCAGACTCTTCGCCGTCGAGCCTCACATTGTCGTCGACCCCCAATCGTGCAAAAATCCCGGGGGATCGACGACAATGTTTTTTGCGCAAAAATCCTACAGCCATCACGGCTGAACCATATTGACAGAATTTTTGGAATGTGGTATTCTGGAAACAACCCAAAGGGAAAAAGCTTGATTTGATGCGCATGGTTTGGG # Right flank : CCCTCTTCAATGTCACGCCATCGTATGAACGTCTTCCGTTTGAAGAAACCGGATGGCTGCACTTCCCCGATCGACCGCTTCGTTTTGCTTCGGCTGCTCATTCTTGCGCCGCTTGCTTTGCAGGAAGCCGCTTTTTTGTTTCGCACATGGAGAACGTTTTGGCATCTGCTTTTTTTGTATGGCCCCATTGATCCACCAGGCATGGTTGTTCACCGCCTTTCTTTGCCGCTGCTGCATTTCCTCAGTCCGATGCGATATACTTGACATGGGAACAATCACGCTTCTTTCTCGTTCACCGTCGTGTCGGCGGACATGCTGCGTTGGCGTTGGACGGTTTGAAAGAAGGCGGAGAAAAGCGACAGGGGTGGGATGGATGCGCCGCAAACTTCGCGATCTTGGTTTTTCCATCGGCACGCTTCCGACAGGGGAGCGCAATCAAGTCACCGATGTGCCTGGGGTGCGGGTCGGTCATGTGACGATTCGGGAAGATATGAATGAGC # Questionable array : NO Score: 9.23 # Score Detail : 1:0, 2:3, 3:3, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTTATCGTACCTATGAGGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:63.33%AT] # Reference repeat match prediction: F [matched GTTTTTATCGTACCTATGAGGAATTGAAAC with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-1.40,-0.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-9] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [56.7-50.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [9.78,0 Confidence: HIGH] # Array family : I-B [Matched known repeat from this family], // Array 2 2064714-2063815 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP042251.1 Geobacillus thermoleovorans strain ARTRW1 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ======================================== ================== 2064713 30 100.0 40 .............................. AAGCGTGGCGCGCCGGCACGTTGGCTCAGACGGCGGCACA 2064643 30 100.0 35 .............................. ACGTCAAATCCAGCTAAACGTTGTAAGTCGTATAA 2064578 30 100.0 39 .............................. TACGAAGTTTCTTTTGAATTTCGATGCTTTCATGCTTGT 2064509 30 100.0 39 .............................. AAATTACATTTTCATCGGGATTCATTCCCTTTTTACACC 2064440 30 100.0 36 .............................. CGTAAATGAAAAATAACGTTCCCATTCTTTTAGTTG 2064374 30 100.0 35 .............................. AGAAGATGCGTTCCATTGAGTCGACTTCGATGTAC 2064309 30 100.0 36 .............................. TCTAGGGCGAAAACCCTTTCCACTTGGCCGCTTACT 2064243 30 100.0 37 .............................. CAAGGCCAATTGCCTGAAAATGCCGAGCCTATTAATC 2064176 30 100.0 35 .............................. TTGAGTGTGACGGTTTGGGACTGAAATATATTTTC 2064111 30 100.0 35 .............................. CCAACTCCATACTTTCATCGGCTCGGTATATTGCA 2064046 30 100.0 39 .............................. TCCAAGTCACCGACAGACCGTACAAGCCGATCCAATTTG 2063977 30 100.0 36 .............................. TATAGCGATCAATGGCCAAAAATACGCGCCGACGCC 2063911 30 100.0 37 .............................. ATCTGTTCAACAGTTAAATCACGTGGTACAGGAATAC 2063844 30 86.7 0 ...............G..G....C....G. | ========== ====== ====== ====== ============================== ======================================== ================== 14 30 99.0 37 GTTTTTATCGTACCTATGAGGGATTGAAAC # Left flank : CCAACCCGTCCCTTTCCGACGATATCGTCCGTGTCGCCCGTTCGCCGATCCGCAAGCTCGGGCCGAACGACCGGCTCATCGCTCCGGCGACGCAATACTGCACACTATTTGGCAGCGTTCCTGCTGGTCTCGCCAAAGGAATTGCCGCGCTGTTGCGCTTTGATGATGCGAGCGATGCAGAAGCCGCCGCTCTGCAACAAACGATCGCACACCACGGAATCGAAGGAGCGCTTCGGCAATACGCGGGGCTTGAGAGTGCGCACCCGCTTGTGGCCGCGGTGAGGGAAGAGTACGGGAGAATGGAGAAAAACAAAAGCTGACCGCCTTTCAAATGTCGTCGACCTCCAATCGTGCAAAAACCCCGGGGGATCGACGACAATATTTTTTTGCGTCAAAATCCTACAACCAACACGGCTCAACAGTATTGACAGAATTTTTGAAACGTGATATTCTGAAAACAGCCAAAAGGGGAAAAGCTTGATTTTATGCGAATGGTTTGG # Right flank : GCTATACAGTACGGTACAACTTTTTCTGTCCCCGATGCAGGATTTTCACCCCCTGCTTGCGAATGGATAGAATTGAACACGTTCAAAGAGGGGTGATGGAATGGCTATTGACCACGACCGGTTGTTTAAAGAACTGATCCAAACGTTCTTCGAAGAGTTTCTTCTCCTCTTTTTTCCCGACATGCATGAACACATTGATTTCAGCCATTTGTCCTTTCTGTCCGAAGAACTGTTTACCGATGTCACGGCAGGTGAAAAATACCGCGTCGATCTATTAGTCGAGACGAAGCTGAAAGGGGAGGATGGGCTGATCATCGTTCATGTGGAGAATCAAAGCTACGTGCAACCATCGTTTCCAGAGCGCATGTTTATCTATTTCAGCCGTTTGTTTGAAAAATACCGCACCCGCATCGTTCCGATCGCTGTCTTCAGCCATGACACCCTCCGCGAAGAACCGTCCGTGTTCTCAATCGAGTTTCCCTTTGGCGACGTGCTGCAGT # Questionable array : NO Score: 9.21 # Score Detail : 1:0, 2:3, 3:3, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTTATCGTACCTATGAGGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:63.33%AT] # Reference repeat match prediction: R [matched GTTTTTATCGTACCTATGAGGAATTGAAAC with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-0.50,-1.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [4-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [50.0-61.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,10.05 Confidence: HIGH] # Array family : I-B [Matched known repeat from this family], //