Array 1 24203-23046 **** Predicted by CRISPRDetect 2.4 *** >NZ_PQVG01000001.1 Flavobacterium alvei strain HR-AY HR-AY_1, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 24202 36 100.0 30 .................................... TGTATCAACAGTTTACTGTAATGACGACCA 24136 36 100.0 30 .................................... ATGTATGTAGAGATATACACTACTTTAGGA 24070 36 100.0 30 .................................... AAAATTGAAATTAAATGGCAAAAAGATAAA 24004 36 100.0 30 .................................... AATAAAGCCGAAACGGTGCTTAGTATTAGC 23938 36 100.0 29 .................................... CTTTTCTCTAAACTTCATAAAATCGACGT 23873 36 100.0 30 .................................... TCATCTAAAAAATGCGACAAAAGAGTTTCT 23807 36 100.0 30 .................................... AAAGCTAATTCACATACTGCAATGGTTGCA 23741 36 100.0 30 .................................... AGAGGTGCTTCAAATAAAATTGTAGGTAAA 23675 36 100.0 30 .................................... TTGTCATTAATCACAAATGAAATAAATACT 23609 36 100.0 30 .................................... TCAACATTGTTTAAATTATCCTTTCGTACC 23543 36 100.0 30 .................................... GCAAATCAATTATCAACAGTACAAGACATC 23477 36 100.0 30 .................................... GCATTCCCCTTGATTTGCTATAATTCCAAC 23411 36 100.0 30 .................................... AAGTGATTTTAATAATGTTTCGATTTGTCT 23345 36 100.0 30 .................................... TTGATTTGCCAGACGCTTTAGGTTCTACTA 23279 36 100.0 30 .................................... GAAAGATGACTAGAGTAATGCCTGCTTTAT 23213 36 100.0 30 .................................... GACGCAGCTAAAAAAACAACTGCTTCTAAA 23147 36 100.0 30 .................................... GTAAAAGAATATTCCCTTTTGAGTCGTGAA 23081 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ============================== ================== 18 36 100.0 30 GTTGTGGTTTGATTAAAGATTAGAAAACACGATATT # Left flank : AATCTATAAAGACGAAAATGAGGAGTTGAAAGATGATATTACTAATTTTTGGAAAGTAGTAGAAAGAGTTAAACAAAAAGATGAAATCTATAAACTACCTGAAATAGAAATTGGTAAACCAGCTCCTAAAGAACTTGTGTTAACTTTTCAGGAAAACGATATGTTTTTGTTAGGACTTTCTAATGATGAGTTCAATGATAATAAACAAGACTTTACTTTTTTAAGTAATTATTTGTATCGAGTTCAGAAAATTTCAGATGGAGATTATTCATTTAGACACCATCTCGCGTCAACTGTCACAAATAAAATGGAGGAAGTTAGAATAGCGAGTATGAAAAAGTATCAAGAAATGAATCCAATAAAAGTTAGAATTTCATTTACTGGTAAAATTGAAAAGTTGTAAATTTGAATGTTCTTTGACATTTCGTTCTAACTCTTAAACATCTCAAACCACAACTGAAAGGTATGGCATCCGCCCAGCAGGGATGCAGTAGCTTTCA # Right flank : AGTTGGCTTGTTACCTTCTGATATTCATAGAATTAAAAGTAAATATCGTATAAAAAAATGCCTCTTTATTGGTTTGATAACCCAATATTGAGGCATTTTTTTGTTTCTAGAAACCACCCCGCCCTTTGGGCACCCCTCCAGTGGAGGGGAAGATCAAAATAATTCTAATTGTGTGGGTTGAGGTGCTTTGGGGACTTCGGCTTTGCCCCAAAAATTTAGGATATTGCCAAATTGCTTGTCGGTTATTCGTAAAACACTCACTTTGCCCAATGGAGGCAAAAGGTTGTGAATGCGTTTTTCGTGTACATCGGCACTTTCGCCACTGGCACAATGGCGAACATAAACCGAATATTGCATCATCGAAAAACCATCTTTGAGCAAGTTGTTCCGAAATCCCGAAGCGTTTCTTCGGTCTTTTTTGGTTTCTGTTGGCAAATCAAAAAACACAAACAACCACATTATTCGGTAGGCGTTAAGTTCCATAATTTGGGATATTTAAT # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGTGGTTTGATTAAAGATTAGAAAACACGATATT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:72.22%AT] # Reference repeat match prediction: R [matched GTTGTGGTTTGATTAAAGATTAGAAAACACGATATT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [0.00,-1.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [75.0-50.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,4.87 Confidence: HIGH] # Array family : II-C [Matched known repeat from this family], //