Array 1 96336-94051 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAAFCJ010000004.1 Klebsiella pneumoniae strain 9-79 NODE_4_length_265792_cov_42.629603, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 96335 29 100.0 32 ............................. AAGAACCTTTCGATCGCTGCAATTATCTACGC 96274 29 100.0 32 ............................. GCGTGGACACGGATGTAGTGCTGGAGAAGGCG 96213 29 100.0 32 ............................. TTTACGGAATTGCTTAGGTCGCGAGAATGTCG 96152 29 100.0 32 ............................. TAGTCATTTGCCGGTGACGGGAACCCCATAGC 96091 29 96.6 32 ................T............ ATTAAATAATTCGTTTACGTCCATGACGAGAT 96030 29 100.0 32 ............................. GTAATCCTGATATTGGCGTATCAATGGTCACG 95969 29 100.0 32 ............................. TAACCTCGTTTATGTGCGCGTTTTATAGTTGC 95908 29 100.0 32 ............................. TGCGGGCCACCAGGGTTGCAGGGTATCAATGG 95847 29 100.0 32 ............................. GCCCAGATCGGCTTTTCATCCCGAAGCCGGGC 95786 29 100.0 32 ............................. GACACCCGCACGCGCCGGGCAGGCGTGGAACT 95725 29 100.0 32 ............................. TCGTCGGGTTTATTGAGTATTCCGCCTGATTT 95664 29 100.0 32 ............................. CAGGTCAGCGCAATGTTCCGGGATATCGAGGA 95603 29 100.0 32 ............................. ATGACAAAACCAAAATTGAGTTTTGGCTGCAG 95542 29 100.0 32 ............................. TTGTCCACTTCACGCCAGTAGTCTTTAGAGAT 95481 29 100.0 32 ............................. AATGGAGGTCCGGTTACTGCTGGAAATGTTTA 95420 29 100.0 33 ............................. ATCCCCACCACCGGCGCTGGCGAGTAGTACCGC 95358 29 100.0 32 ............................. GATTGTCTGACAGATAATGCAGCGCAATGCGC 95297 29 100.0 32 ............................. ATGTGAATTTCCTGGCCGGTTGGTAGTTTGAA 95236 29 100.0 32 ............................. TACTGAAACGGGTAATCAGCACAAATACCAAA 95175 29 100.0 32 ............................. CATCGCTTTATGCCGAAATGAGGATGATAGTG 95114 29 100.0 33 ............................. GAGCTTTCCTCCTCGTATCACTACCGCGCAGAC 95052 29 100.0 32 ............................. ATCAATTCCCTCATTTTTTTTCCTTTAGCTCG 94991 29 100.0 32 ............................. TTCATCTGGTAGCAAACCGCCATCGGGAAGAA 94930 29 100.0 32 ............................. ATTTTTTGGGGCACAATTTGGGGCATTTTTTT 94869 29 96.6 32 A............................ AGGGTTTCGATTTTATCGGGATAGAAATGAAT 94808 29 100.0 32 ............................. TGGCGGACGTTGTACCTGTGAGTTAATTCTTC 94747 29 100.0 32 ............................. ACCGCTCCTCTGACGCCAGGAGGGTGTAGGAG 94686 29 100.0 32 ............................. TCCAGGGGCAAAGAATTGCCCATTATCGTACA 94625 29 100.0 32 ............................. TTTGCAATATCTGCCTGCGCCGCCGCCAACGT 94564 29 100.0 32 ............................. CTCGGATAAAATGCCTTGCATGAGGCGAACGA 94503 29 100.0 32 ............................. GCGTCCAGTTGAACCCGGCACATTCCCGCTGG 94442 29 100.0 32 ............................. TACGCAGCCGGATCCAGGAGCGCATGGACGCT 94381 29 100.0 32 ............................. GCACGATATTCAGCATCATCAGGACGGTTCAT 94320 29 100.0 32 ............................. TCACGCCCAGGGCTTCCTTTGCGTTCCGAAAA 94259 29 96.6 32 ........T.................... CCCCGTCGTCATTCGCGCATTCTGCGCACAGA 94198 29 96.6 32 .....A....................... TGCGTCACGACGCCGGCGACAGTGACATCGTC 94137 29 100.0 29 ............................. GGGTTCACTTGGGTGAAACTGAACTAACT 94079 29 75.9 0 ...........ATTC...A......G..C | ========== ====== ====== ====== ============================= ================================= ================== 38 29 99.0 32 GTGTTCCCCGCGCCAGCGGGGATAAACCG # Left flank : GTGCTGTCTGCTGGCGAAATTGAACCGCCTCAACCACCGCCGGATATGCTGCCGCCGGCGATACCCGAGCCCGAGTCGATGGGAGATAAAGGGCATCGAGGGCATGGCTGATGAGTATGCTTATGGTGGTGACGGAAAATGTTCCACCTCGCCTGCGAGGACGGCTCGCAATCTGGCTGCTTGAGATCCGCGCTGGGGTATATGTTGGTGATACCTCAAAACGGATCCGGGAAATGATCTGGCAGCAGGTGATACAGCTAAGTGACGGTGGAAATGTCGTGATGGCCTGGGCGACAAACAGCGAATCAGGTTTTGAGTTTCAAACCTGGGGAGAAAACCGCCGTATACCGGTAGATTTAGATGGCCTACGACTGGTTTCATTCCTTCCGGTTGAAAATCAATGAGTTGGATGTTCTTTAATAATGTGAGATTGTTGTGATAAAGTTGGTAAATTGTTGTGTGCTTAAAAAGCTATTATAAAACAGTAATATATCTTTAGT # Right flank : GTCCACTAACGTTATCGATCCTGAGGGTGGGCACGAAAGCTTGCGGAGAATAAATATCGCTACCTGCCGCTCTAGCGATATCACTGTTTTTTTACCGTCTCCTGGATCGCGCTAAAATCCGGCTCCGGGCAATCCCGACCAAAATTTTCGGCCCATGGGAACGGGGCGCCGTACTTAACATAGCGCTGATACAGGCGTTTGGTTAATTGAGCATCCCGCCCCCATACCCATCCTGTTGCATTACACAGCACGGCAGCATAGGCCTGTGATTTATATGGCAACAGGTCGGCCGCTTTTTCCGCCAGCGTCACCGCCTGCCAGCGATAGTGTAAGAAATGACTGTCCTGTTTTGGCAGGGATCGCTGAACGCGTTGCCGTTCGCCATCACTTATCCACGATGTCACGGCCGAATTATCTTCCGGTCCCTGGTTGTAATAGGGCCATGAATACCCGCCTCCATATAGCGCAAAATCGGGCGCCATCTCATAGCCTGTCAATTC # Questionable array : NO Score: 6.21 # Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,5] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.00,-13.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [9-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [50.0-76.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.92 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //