Array 1 22111-23298 **** Predicted by CRISPRDetect 2.4 *** >NZ_WVWE01000002.1 Escherichia coli strain WX095 NODE_2_length_105252_cov_114.661260, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 22111 29 100.0 32 ............................. TGGTTTGAGCCGTTTAAAGTTGAACAGGCGAC 22172 29 100.0 32 ............................. GCTTTCAGTCGAGTGGCAGCTACGAGGAATCG 22233 29 100.0 32 ............................. GACACGGATAACAGCTACCTGCAAAATTTAAT 22294 29 100.0 32 ............................. TTCTCCAATCAGCAGTGCCCATCTGATATGCA 22355 29 100.0 32 ............................. TCAGGGGAATTGCGATATTCAGGCAGCGTAAC 22416 29 100.0 32 ............................. ATCGCTGGTCTGCGAAAACGCGCGCCCGAAGA 22477 29 100.0 32 ............................. ACGAGGTACAGTGGTGCAAAAACAAATTATAG 22538 29 100.0 32 ............................. TTACCGAGCGTCACGAAACAGACAACACCAGG 22599 29 100.0 32 ............................. GCCCAGAATCTCTTTTAGCGCAACGATATTCC 22660 29 100.0 32 ............................. GCTCCGGTTTTAAAATAAACCCGGCAAAAACG 22721 29 100.0 32 ............................. TTAACGCGAAAGCGTCGGCGGTCAGTCGGCAG 22782 29 100.0 32 ............................. GAATATCGGGTGCCAGCCTGGACGCTGGCCGA 22843 29 100.0 32 ............................. ACGCGAATCGGCGGTTTTGAGCGGGTAGCAAA 22904 29 100.0 32 ............................. GCAAACAGCTAACCACCGCCGGGGCGGTTTCC 22965 29 100.0 32 ............................. CGATGATGTAATAATTAGAGCAGAATCCAGTT 23026 29 100.0 32 ............................. CAAAATTTAAAATCATTTAAGCTTGTAAAACC 23087 29 100.0 32 ............................. GGTACACGGATATTCTGTCTAAAAGTTAACTA 23148 29 100.0 32 ............................. ACTGATAACGCCGGAGCCTTCTTTTTCAGCAA 23209 29 100.0 32 ............................. GCAATTTGTTGTCCGCGATCCGGTACGCGCGT 23270 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= ================================ ================== 20 29 100.0 32 GTGTTCCCCGCGCCAGCGGGGATAAACCG # Left flank : GTGCTTGCCGCAGGTGAAATTGAACCGCCACAACCTGCGCCGGATATGTTACCGCCAGCCATCCCCGAACCTGAAACGTTGGGCGATAGCGGTCATCGAGGACGCGGCTGATGAGCATGGTCGTGGTTGTTACAGAAAATGTCCCGCCGCGCTTACGTGGACGGCTCGCAATCTGGCTACTGGAAGTGCGTGCCGGTGTGTATGTTGGTGATACATCAAAACGTATTCGGGAGATGATCTGGCAGCAAATTACCCAACTGGCAGGTTGTGGAAATGTGGTCATGGCCTGGGCGACAAATACTGAGTCTGGTTTTGAGTTTCAGACCTGGGGCAAAAACAGACGTATTCCGGTGGATTTGGATGGGTTACGTTTGGTTTCTTTTCTTCCTGTTGATAATCAATAAGTTAGACGTTCTTTAAAAATAAGGAAATGTTTGAATTTAGTTGGTAGATTGTTGATGTGGAATAAATTTGTTTAAAAACAGATATGTATGCTTAGT # Right flank : GGGCGCACTGGATGCGATGATGGATATCACTTAGAATTCCCCGCCCCTGCGGTAGAACTCCCAGCTCCCATTTTCAAACCCATCAAGACGCCTTCGCCAGCTCCTTCACCAACGGTAGCATTATCCGCATAACGTCACGGCAGCGACGTTCTATTCTTCCAGGAAGTGCCTTATCAATATGCTGTTGATTATCCAGTCTTACGTCATGCCAGCTATTTCCCGCAGGGAATGCGGCTGTTTTTGCGCGTTGCTGATAACCATCCTTATTCCCAAGATTCCAGTTAGTCGCTTCCACCGAAAGTACAGCAATGCCCGCTTTGTCGAATATTTCTGCGTCATTACAACACCCAGTGCCTTTCGGATAATTTTTATTCAAACCCGGATTGGTCGTTGCGGCTATTCCGTGACTGCGCGCAATTGCCAGCGCCCTGTCGCGCGTTAATTTCCTTACTGCTTCAGGGGTTTTTACACCGCTGTTGAAATACAATTTATCGCCAACA # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.50,-12.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [73.3-43.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.51,0 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 1 1276-2036 **** Predicted by CRISPRDetect 2.4 *** >NZ_WVWE01000267.1 Escherichia coli strain WX095 NODE_267_length_2254_cov_60.667892, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 1276 29 100.0 32 ............................. CCGATAAAATGCAAAAAACGCGGCGTTTTTTG 1337 29 100.0 32 ............................. AGGCATCGCATGTCGCCATTCCGATCGGGGAC 1398 29 100.0 32 ............................. GGGGTATGAGGGCGCGATCGTGGTACAGGAGG 1459 29 100.0 32 ............................. CGTAGCGCCGCAGAGCATTTACGCGAGTTATT 1520 29 100.0 32 ............................. GAGCAACAAAACAATGAATCCAACGGATTGCC 1581 29 100.0 32 ............................. CCCTCCAGTACTGTGATGCGATCTTTAAGTCC 1642 29 100.0 32 ............................. AACTCTCACCGGAGCAGAAAAAAAGAAACCAG 1703 29 100.0 32 ............................. TTATCGCACCGTGTTAAACCGGCAGAAAAACA 1764 29 100.0 32 ............................. CGTGCCTTCGACTTTGCGGATCACGTCGTCTT 1825 29 100.0 32 ............................. ACGGGGACGAATCACAGCAGCGTTATCGTGAT 1886 29 100.0 32 ............................. AAACCGGACGAGGGCGCGCTAAAACGTGATTA 1947 29 100.0 32 ............................. CCTCTCAATTTGTAACGTCTGCAATGTCAGGC 2008 29 96.6 0 ............................A | ========== ====== ====== ====== ============================= ================================ ================== 13 29 99.7 32 GAGTTCCCCGCGCCAGCGGGGATAAACCG # Left flank : TGGATGAACTACTGGCAACGCTGACCGATGATAAACCGCGAGTCATTGCACTGCAGCCGATTAGCCAAAAGGATGATGCCACACGTTTGTGCATTGAAACCTGCATTGCGCGTAATTGGCGTTTGTCGATGCAAACACATAAATATCTAAATATTGCCTGATTAAACATTTATAAGCGTTATAAATGGGTGGAACCTGTAAAGACTTCTACTCATTTATATTGTTTGTCGCCTCTGAAAACTCCTCCATTTTACCCATCCAGGGCTAATCATTAGCATTCTCTACAAATTCTGTGGCATTAATTTTTCGCTGGAGTGAAAATTATTGCGGTAAAGTTTGGTAGATTTTAGTTTGTATAGAGTTATTTTAAATATTTACCTTTTTAATCAATGGATTAAGTGCTCTTTAACATAATGGATGTGTTGTTTGTGTGATACTATAAAGTTGGTAGATTGTGACTGGCTTAAAAAATCATTAATTAATAATAGGTTATGTTTACA # Right flank : CCATATAACCCGTTATCTCTTTCTCAAGTTTTTATATTAGCAGTACTTGTAATAAGCAACATATCCACGTAACACCTCATGTTCAAAATAGTTCTCCATGCCAGAGAGGTTCACAATTATCGATACAAAAAATTAAATTTAATCAAAGTGTTATTTGTATGATTCTTAAATCGTTAAGAAATTTTAATCTATTATTTTTTTAATATTGAATTAATGCC # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GAGTTCCCCGCGCCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [6,3] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GAGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.50,-12.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [75.0-68.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.65,0 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //