Array 1 20515-23896 **** Predicted by CRISPRDetect 2.4 *** >NZ_NHPD01000070.1 Halorubrum ezzemoulense strain Ec15 contig0039, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ===================================== ================== 20515 30 100.0 36 .............................. AGCCGGAGACTGTTCTCCGGCGTGTTGAAGAGCGCA 20581 30 100.0 36 .............................. CGGGAGTGTGAGTAGGAAACACTATGATACAACGAA 20647 30 100.0 35 .............................. GGGATCCGCGCGCTCCCGTGTGACTACCCGGAGAC 20712 30 100.0 35 .............................. TCACGCCATAGGCGGCGGCGCGGGGGCGTCACTCG 20777 30 100.0 37 .............................. GACATGGTCGTAGCACGACCAGCCGGGTTAGAGCGCA 20844 30 100.0 36 .............................. AACGGGACCGACATCGAGGGGGTTGGATCGCTCAGT 20910 30 100.0 36 .............................. GACACGGCTGACAACGCGTACAACCCCGGAGACGTT 20976 30 100.0 35 .............................. TTCTCACGTCATAGCCGGCGGTCGGCGGCGGCGCC 21041 30 100.0 34 .............................. GTTGCGCCGGTGCGACTGCTCCGCGGGGAGGCGG 21105 30 100.0 34 .............................. GGACAATACTGCTGCGGGAACCTCCCGATGCGGG 21169 30 100.0 35 .............................. GCCTTACAGACACGCTCCAACTCGGCGAACACGTC 21234 30 100.0 35 .............................. TCGGTGCGTTTATCGTCGTCGCGCTGGCGCGCGCC 21299 30 100.0 35 .............................. AGGCCGATGCGATCGCCAGCGACGGCCATGTACTC 21364 30 100.0 36 .............................. CGACTCGCACCGACTCGCACCGACTCACGCCGCCGA 21430 30 100.0 37 .............................. GCGTACCAAGAAGCCGCCGACGAACTCCAGCACAACC 21497 30 100.0 35 .............................. AGGTCGACCGGGAGCGTCACGTTCGACGCGTCGAT 21562 30 100.0 35 .............................. CAGATATGCGTAGCGACACCTCCCCACGTGTCGTG 21627 30 100.0 37 .............................. CCAGAACTCTCCTACCTCGCGGTCCGGCCAGCGCGGA 21694 30 100.0 36 .............................. CGGGCACGCACCCGGGACGCGACGCCGACCGACGCG 21760 30 100.0 36 .............................. GACCGGCGGATCGTCCGCGGCCATCTTCCACGTCGC 21826 30 100.0 35 .............................. GTCTCGAACGACGATACCGGCCCGTGCATCCACGA 21891 30 100.0 35 .............................. ATGGAGAACTCCCCGATTCCGGACGACCTCGGCGG 21956 30 96.7 36 ..C........................... AGCACCTCAGCGACGCTCTACGGGGCCTCTCTAACC 22022 30 100.0 36 .............................. GACGCGATCGGGGATACGGATATGTGGATGGAGGCC 22088 30 100.0 37 .............................. CAGGCATCGGCATTCACGTTGACAGCGTGCTAGAGGA 22155 30 96.7 36 ......T....................... TTGTGTATTGGCGGTGCGGACAAACGCCTCGTAGCT 22221 30 100.0 35 .............................. GCCGTCCCCGGGTCGTACCCCGAGAACATCCCGGA 22286 30 100.0 36 .............................. GTTACAGTCGTCGTTTTGGCACTCCCAGCCCTCGCT 22352 30 100.0 36 .............................. ATCACCTCGTACGGCACCGCGTCGTCGAGATCGTCG 22418 30 100.0 35 .............................. TGGAAGACGATCCCACTGATTGTCGTCCCTTCGGA 22483 30 100.0 34 .............................. AAGCCGAGACCGATTACGGCCGCCGTGAGATCAA 22547 30 100.0 36 .............................. TCTCGACGAACTGTTTGAGCAGCGCGAGTCCGCCGA 22613 30 100.0 36 .............................. GCGCTCTTTGTAGTTGCCGAGCCCGAGGTTCTGCCG 22679 30 100.0 37 .............................. GTGAGGATCTGGAAGATGTGCTCCGGGTGGTTTCGCA 22746 30 100.0 36 .............................. TCTATCTCCGACTCCGACACCGAAAGCACCCACTTG 22812 30 100.0 37 .............................. GACCCGCCGCGGCTCCAGTCGTCGAACAGCCGCTCGG 22879 30 100.0 36 .............................. GCCCAACTCCTTGGGGGAGTCGATGCCTCTCTCGCG 22945 30 100.0 37 .............................. AGGCCGCAAAATCGCATGACGGCACCACAATATCATG 23012 30 100.0 36 .............................. GACGAGGTCGCCGCCGAACTCACGCAGCGCCAAGCC 23078 30 100.0 36 .............................. GCACGTCTGCTAGAGACGGACGGCGGTAAGGACGTG 23144 30 100.0 37 .............................. TTGGCGCTGCTGCTACTCGTCCCGATGGCGAACAAGA 23211 30 100.0 37 .............................. GTCCGCGATCTCGGCGGGGATGCTTGGGATCCCAACG 23278 30 100.0 35 .............................. GTGAACGGCTCGGTACAGGTGACAAATGATACTGA 23343 30 100.0 37 .............................. AACATCACCGAGGACGAGGTTCGGAGCGCCACGCGGA 23410 30 100.0 35 .............................. AGCAACATCCTCGGTGTACCACTGGCTCATGCCTT 23475 30 100.0 36 .............................. GAGCTCCCCGTCGAGGAATCATCAGCACCAGTGTTC 23541 30 100.0 35 .............................. AACATCACCGAGGACGAGGTTCGGAGCGCCACGCG 23606 30 100.0 36 .............................. GCCGCTCACGACCGACAGCGGCGACGTGCTACTATC 23672 30 100.0 36 .............................. GACCCGCACGTCGACGACGCCGAGGATGTCGACCCC 23738 30 100.0 34 .............................. AAGCCGCTGCTCGTCGTCGTGCGTGAACTCGGTG 23802 30 100.0 35 .............................. AAGGCGACGGCGCGGACGCACGCGGATGGGAACCC 23867 30 86.7 0 .......G..A.....T.....A....... | ========== ====== ====== ====== ============================== ===================================== ================== 52 30 99.6 36 GTTTCAGACGTACCCTCGTGGGGTTGAAGC # Left flank : GTACTCGAATCCGATGCGTTTCAGACGTACCCTCGTGGGGTTGAAGCTCCTCTCACGGACCTTCCCACCGGAAACACGGTGTGGTTTCAGACGTACCCTCGTGGGGTTGAAGCTCCTTGATGGCGACCTCCAAGTCGCGGTCGACGAGTAGTTTCAGACGTACCCTCGTGGGGTTGAAGCGAGTTGCCAGCGGGGCAGCGGAACATCGCCTTAGAGGTTTCAGACGTACCCTCGTGGGGTTGAAGCAACCGAGACCGGGACGGCCGGGTTGTCGGGCTCGTGGTTTCAGACGTACCCTCGTGGGGTTGAAGCCTGAACGCTAATGTTAGTATACGTGAGGCTGCCGCCGTTTCAGACGTACCCTCGTGGGGTTGAAGCGGAGTTCCCTCCCGGCGTTGGTATATGTGTGCTCAGTTTCAGACGTACCCTCGNNNNNNNNNNNNNNNNNCTCGTGGGGTTGAAGCATGGCGAGGTGGGTGCGGGTGGCTCGTAAAGCTCAC # Right flank : CGAGCCCGTCGCTCGGAGCTCGACGTCCGTATCCGCGGGTTTCAGACGAACCCTACATATCGAGATAGGGGCCGTAAGCCCGAAACGTGGGACGGTAGCTGATTATCATAAACATTGAATTTCAGTACCAGATTTAAATGCTTAGCAGATAGCAATTTTGTATGGCTGGAGTTCAAGCAATCTTGCTTGCTATCTGCTTCCCAGTTCTTGCGATAGGACTCCACGAACTGACCCACCTAGCAGTCGCCCGGATTGCCTGCCCGCTTTCGATTGAACAGACCTCGTGGGTCCCGTTCCGACTTCGCCTTGATTTTGAGAGACTGCCGGCAAAATCCACACTCCGGATGATTGCACTTGCTCCTCTATTTGTCGGCGGCGTGGCTGCTGCCATCGCTCTTCAAGTTGGAATTTGGCAACAGATTAAAATCGCTGATCCGTACTATCTCCATCATCTTATGATAGCGTACTGGTTCCTCTATATTATTCCCAGCCCTGCAGAT # Questionable array : NO Score: 6.24 # Score Detail : 1:0, 2:3, 3:0, 4:0.98, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTCAGACGTACCCTCGTGGGGTTGAAGC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [5,8] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTTTCAGACGAACCCTTGTGGGGTTGAAGC with 94% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-5.00,-4.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-4] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [31.7-38.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0.37 Confidence: HIGH] # Array family : I-B [Matched known repeat from this family], //