Array 1 5163-8117 **** Predicted by CRISPRDetect 2.4 *** >NZ_QPLR01000008.1 Halobellus sp. Atlit-31R P_contig000008, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================================= ================== 5163 36 100.0 37 .................................... GGCCGTCCGTAGCGTATCGCCCCCGTCGGCCACCGTC 5236 36 100.0 38 .................................... CCGGTTGCCGAGCTGATTGAAGCGGGTCATCGCACCCT 5310 36 100.0 33 .................................... CAGCAATTACGGCAGCGAGAGCACGGCCGACGG 5379 36 100.0 36 .................................... TCGACCGCGCGCCCGCGTTCGAGTTTGACGTGCCAG 5451 36 100.0 36 .................................... TATCGCCTATGCTGTTTAAGTCGTGGTCGCCCGTAT 5523 36 100.0 37 .................................... ATCATCGTCCCGCACGCCACGGGCGAGCTGGCGCTGG 5596 36 100.0 36 .................................... GTTGGCGCGCTCAACCGGCGGCTCGTCGAGCTGCAG 5668 36 100.0 36 .................................... ACCTCGCTCGTCGGCGTCGTCGGCATCGGCTGGCTG 5740 36 100.0 35 .................................... GCGCCACTCCGTTGTGTCCTCCGCGTGGTGACGAT 5811 36 100.0 39 .................................... GGGTCTTTACCGGCGGTCGCGAGCGACGGGAAGGAGATG 5886 36 100.0 38 .................................... TTTTCCAATCCGGGTGAAGCAATGAACAAAGCCCAAGA 5960 36 100.0 35 .................................... GCCGCGCCGTCCGCCTCGATCGTGACCTGCTCGAT 6031 36 100.0 35 .................................... GTATCCACGCTGACCGTCGGATTCGGCGCCTCGCC 6102 36 100.0 36 .................................... CTCGGCGGTCTTGTCCGACAGCCGGTGCCAGACCGG 6174 36 100.0 35 .................................... CGCGCTCCCAGCGATCGGGTGGTACGCGGCTGATG 6245 36 100.0 36 .................................... TTCGTAACCGAGCCATTCGTTGTCCCTCAGTGCCTC 6317 36 100.0 35 .................................... GTCGGGCTCGTTCGGCTGCTCGCCGCCATCGGGCC 6388 36 100.0 36 .................................... GGCTACCCCGTGTTGGATCGCTAGCCGCATCGCCCA 6460 36 100.0 35 .................................... GACTTCGCTCATCGCTTATCACCTCGAGCGATCAC 6531 36 100.0 37 .................................... TTTCTCGGGGCAGACATTGCTGCTGCAGGTGCAAACG 6604 36 100.0 37 .................................... GCCGAAGCCGCGCTCCGAGAAACTCTCGGCGTCGACG 6677 36 100.0 38 .................................... ATCTTTACCGTCGTGCCCGCCACAGTCACGAACCTCGC 6751 36 100.0 38 .................................... ATCCCTTGTACTCCATTCGCGTCTCCATCTCCGAAAAC 6825 36 100.0 39 .................................... CATCCGAAGCTCAATCTGCGACGCGCTTCGACGAGCCTC 6900 36 100.0 36 .................................... GAGCGACCCGAGCGTGAACGTAGCGGCCGTCCGCGG 6972 36 100.0 38 .................................... CGAATGAGCGCCGATCGCCCCGCCGCGCCGACCGTCGA 7046 36 100.0 45 .................................... GCATATCGAGAAGGGTTTTCCCTGATAGGGACCGTTTCAATGCCG 7127 36 100.0 36 .................................... GAAACCCGCGCCGGCATCGAGGTCGCGCCGCCGCAA 7199 36 100.0 38 .................................... CAACTGTAGAGGACGAAACTGGTTCAAATAACGGTACA 7273 36 100.0 36 .................................... GATGCCGCCACCGTCGACCACCCGCAGACTGTCGGC 7345 36 100.0 41 .................................... CACTGATATTTTTATTCTGCAAGGTGACGACAAGAAGGACA 7422 36 100.0 37 .................................... TCCTGCCCGGTGTCGGTGGGCGTGTCTTGGCGCACGT 7495 36 100.0 36 .................................... AGCCTCGACGGCGTCCCGCTCGACGAACAGCTCGTC 7567 36 100.0 40 .................................... CCATCGGACTCAAAGAGGCCGACTTCCGACACGCCGGTCT 7643 36 100.0 35 .................................... GACAGTGACACTGAACCGCTGATCGGCCGGCAGCC 7714 36 100.0 38 .................................... TGTGAGATCGCCGAGCGGTTCGAGCCCGGCTCGTTCGA 7788 36 100.0 35 .................................... AGTCAGCAGGCGTTCGCGGGCGCGTCCCGATCGGC 7859 36 100.0 36 .................................... GTGGCAAGTAGCCCGAAGGAAGTGCTCGCACCAGTA 7931 36 100.0 42 .................................... TTGTGAGTTTCACACCTTGGCATTGGTCCTCCGTTTGATAAC 8009 36 94.4 37 ..........T........................T TACGTCTGTGCGCGAACCAGCCCCCGCGCCGGCGAGT 8082 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ============================================= ================== 41 36 99.9 37 GTCGGACCGACGAGAAAGCTCAGCAGGGATTGAAAC # Left flank : CTGAACCGAGTGCTGACCCGGCGAGGGGTCATCAGGCTACAGGCGAATCTGCTGCGGAAGCGTGTGACGGGCGAAATCGACGAGTATCCGCCGTTCGAGGTCGATCGATGAGCGAGACCCGACGCTACGTCGTCGCGTACGACATCACTGAAGATTCGTTGCGGCGGCGAATCCGTGCAGCGTGTCGTGCGTACGGTGGTCGGCGGCAGTACAGTCTCTTCGAGATGTACCTGAGTGAACGCGAGCGCGCAGAGCTCATCACGGATCTCACAGATCTACTTGCGCAACGTGACGAGTACGCATCGGTGAAGGTCTACTCCGTTGGACCACCGGATCGAGATGCGACGCTCGGAGAGACTCCAGCAGAGAATCCGGAAAATGTTGTCTGAAAACTGGTCGACCGTTATAGTATCTGTAAATAGCCCCCATCCACGAGCTCAACCCGCGATCAGACGGATAGGAAAGGAATTAAACAGCCTCTCGACGAATATGAGGGTGCT # Right flank : CTCGGTCTCACGGAAAATCCAACAAGGAATTGGGGCATCCTCGTCGAGAAGCCGATACCATAGCTAATTACTCACGGCTCAGGAGAAAACTCATTGAGCACGCAGCAGGCCAACTCAATTGCTCTTCCAGAGCCCGATTTACCCAAACCCGGCCCACCATCCCGGTCGCACAGCGTGCGGCGGCCGCGGAGCCGGAATCGGCCGACGGAGATCCGCGTCGATGTCGCCTTTCAGATAGAGTCGGCCGATAGTCTGAATCTCGTACATCGACGAGCCCTCACGAGCTGGCGCGATCAGATCCGCATCGGACAGAACCTCACACCGGTCTGCAATCCGATCCGCCGAGGTAGTAAATCGAAAGTGCTCACTCATCAGCCACGGATCAGACCACGTCTTGCCATCCAAGTGTTCGAGGATACGTTCGTCGAGCTTGTGCATCCATTCGGCAGATTGGCGCATCAGTCAGCTCTCCTGCCCGTTTTCCTCTTCAGCAGGTGTAT # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:0, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGGACCGACGAGAAAGCTCAGCAGGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: F [12,4] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-3.40,-4.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [50.0-48.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0.37 Confidence: HIGH] # Array family : NA // Array 1 331-36 **** Predicted by CRISPRDetect 2.4 *** >NZ_QPLR01000786.1 Halobellus sp. Atlit-31R P_contig000836, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ====================================== ================== 330 25 83.3 37 -----......................... GGACCCGGATAACCTCGCGTTCGTCGAGTTGAACGGC 268 30 100.0 38 .............................. CTGCGCCGTGACCGTCTTCGTCTGCATCGGTCCGTCGG 200 30 100.0 38 .............................. TACTTATAGCTTTCCATAGAACACTATGGTTGGGAGTT 132 30 100.0 37 .............................. GGACCCGGATAACCTCGCGTTCGTCGAGTTGAACGGC 65 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ====================================== ================== 5 30 96.7 38 GTTTCAGACGAACCCTTGTGGGGTTGAAGC # Left flank : | # Right flank : CCTGCGCCGTGACCGTCTTCGTCTGCATCGGTCCGT # Questionable array : NO Score: 5.70 # Score Detail : 1:0, 2:3, 3:0, 4:0.84, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTCAGACGAACCCTTGTGGGGTTGAAGC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [5,6] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTTTCAGACGAACCCTTGTGGGGTTGAAGC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-5.00,-5.90] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [20.0-0.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,5.24 Confidence: HIGH] # Array family : I-B [Matched known repeat from this family], //