Array 1 187364-184656 **** Predicted by CRISPRDetect 2.4 *** >NZ_NICB01000003.1 Klebsiella pneumoniae strain AUH-KIMP159 NODE_3_length_436567_cov_22.8328_ID_1925, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 187363 29 100.0 30 ............................. CTCACGCTGATACCTCGGAAAAAGACGGGC 187304 29 96.6 32 .G........................... GCGGGCTGGGTTTTGTCGACTCTGCCGATCCG 187243 29 100.0 32 ............................. TAATATTGATAAATTCGATGAAGTAACCGGAA 187182 29 96.6 32 ............................A TCGAAGTACCAGCGCCGCACCGTGTTTTTTGC 187121 29 100.0 32 ............................. GTGGCCGGTGCTGCCAGTACGGTTACCGAAGT 187060 29 100.0 32 ............................. CATCCACGCTTCTGGCCACCAGGCAGATAATC 186999 29 100.0 32 ............................. CGGAAATTTTGATTAGTTGAATCTGTGCCATT 186938 29 100.0 32 ............................. CCGACTTGGGACGAGGATCCGGCGGAATGTCG 186877 29 100.0 32 ............................. TAATGGCAAAACCATGACCTGATCCGGGCGTC 186816 29 100.0 32 ............................. CCTGAATCTTCACTTCGTCGATCATTCTGCGC 186755 29 100.0 32 ............................. GGTCAAAAGGTTCATTCGAGCATCGAGTTGCA 186694 29 100.0 32 ............................. GTAACGCAGACGGCGAACGTCGGATCCATTGG 186633 29 100.0 32 ............................. GACCAGAAAGCCTGGGCATTGTTCCGCTCATT 186572 29 100.0 32 ............................. CCCCCGGCCGCGTGGCCGATTGCCATTACCGC 186511 29 100.0 32 ............................. TATACAGTATTATCATAGCGAATTCCCATCGG 186450 29 100.0 32 ............................. GTTGGTAATTACTGCTGTGTGTTACGGATAAA 186389 29 100.0 32 ............................. GCACCAACGTTTACGGTGCGGTGGTGAAACAA 186328 29 100.0 32 ............................. TGCCGGACGTTGTACCTGTGAGTTAATTCTTC 186267 29 100.0 32 ............................. CGATAACCGGGCGTTTCGACTGAACTCACCTC 186206 29 100.0 32 ............................. TTAATACCAGGGGGCAGGTTCAGCAGGTCCCC 186145 29 100.0 32 ............................. CCGCTTTAACCCGCTCCGGCAGATCCGGGTGA 186084 29 100.0 32 ............................. CGCGCTGCGAATTTGTTGGTCGATTTCGATCT 186023 29 100.0 32 ............................. TGGGTAGAGGTTAACTGGTTATTGGTCATTGA 185962 29 96.6 32 ........T.................... ATCGCGGAGGCCTTCGGTGTGTCTCTTTCCTG 185901 29 100.0 32 ............................. CCGTTGTCAATATCTCCCGGCGTCCGCGCCAG 185840 29 100.0 32 ............................. CTGCAGGTAAATGACTGGATGGGGGAAGAGGT 185779 29 100.0 32 ............................. CACGTCCGGAAACCACGGGTTATCCGTGTAAT 185718 29 100.0 32 ............................. CAGAGGTCCTTATCTTTTCAACGTCAAAGTCG 185657 29 100.0 32 ............................. GCAATCCCAGAGCGCGAATATCTTGGGCTCTC 185596 29 100.0 32 ............................. GACATGGCGCGCGAGTTTATCGACGCCTGCGC 185535 29 100.0 32 ............................. GGGATGAGCGTTTTCCGGTGGATTCTGATGTG 185474 29 100.0 32 ............................. TCCCCTACCACCCACTGAGCAAACTGGTAGCA 185413 29 100.0 32 ............................. CAGATACCAACGGTTACTACGGCAATCAGCAC 185352 29 100.0 32 ............................. AAGGTTGACCTGTTGTCGGCAACCATCGAGCC 185291 29 96.6 32 .........A................... GAGGCGCGCGTTGTCGTCGGTGAGATGCGCGA 185230 29 96.6 32 .....A....................... GCCATTCGTGCTTCTTCGCTTTGCTGCATCCA 185169 29 100.0 32 ............................. GAATATAAAACCAGATTCCATATAGCCCTGTG 185108 29 100.0 32 ............................. CCGGTTACGGGGATGACTGCAATTCGCTCCTG 185047 29 100.0 32 ............................. GGTCAAAAGGTTCATTCGAGCATCGAGTTGCA 184986 29 100.0 32 ............................. GCGGCGTCAGGTGTGTGGCAGAAAATTATTGC 184925 29 100.0 32 ............................. TCGTCTGAGTTCCGGCTTACGCCGTGCCGACA 184864 29 100.0 32 ............................. GTGATCGTCATGGATATCACTGCCGTTCCGTC 184803 29 100.0 32 ............................. CAGACAGACAGCAGGCAGCAAACAGGGAAGAC 184742 29 96.6 29 ............T................ GGGTTCACTTGGGTGAAACTGAACTAACT 184684 29 75.9 0 ...........ATTC...A......G..C | ========== ====== ====== ====== ============================= ================================ ================== 45 29 99.0 32 GTGTTCCCCGCGCCAGCGGGGATAAACCG # Left flank : AGGTGCTGTCTGCTGGCGAAATTGAACCGCCTCAACCACCGCCGGATATGCTGCCGCCGGCGATACCCGAGCCCGAGTCGATGGGAGATAAAGGGCATCGAGGGCATGGCTGATGAGTATGCTTATGGTGGTGACGGAAAATGTTCCACCTCGCCTGCGAGGACGGCTCGCAATCTGGCTGCTTGAGATCCGCGCTGGGGTATATGTTGGTGATACCTCAAAACGGATCCGGGAAATGATCTGGCAGCAGGTGATACAGCTAAGTGACGGTGGAAATGTCGTGATGGCCTGGGCGACAAACAGCGAATCAGGTTTTGAGTTTCAAACCTGGGGAGAAAACCGCCGTATACCGGTAGATTTAGATGGCCTACGACTGGTTTCATTCCTTCCCGTTGAAAATCAATGAGTTGGATGTTCTTTAATAATGTGAGATTGTTGTGATAAAGTTGGTAAATTGTTGTGTGCTTAAAAAGCTATTATAAAACAGTAATATATCTTTA # Right flank : GTCCACTAACGTTATCGATCCTGAGAGTGGGCACGAAAGATTGCGGAGAATAAATATCGCTACCTGCCGCTCTAGCGATATCACTGTTTTTTTACCGTCTCCTGGATCGCGCTAAAATCCGGCTCCGGGCAATCCCGACCAAAATTTTCGGCCCATGGGAACGGGGCGCCGTACTTAACATAGCGCTGATACAGGCGTTTGGTTAATTGAGCATCCCGCCCCCATACCCATCCTGTTGCATTACACAGCACGGCAGCATAGGCCTGTGATTTATATGGCAACAGGTCGGCCGCTTTTTCCGCCAGCGTCACCGCCTGCCAGCGATAGTGTAAGAAATGACTGTCCTGTTTTAGCAGGGATCGCTGAACGCGTTGCCGTTCGCCATCACTTATCCACGATGTCACGGCCGAATTATCTTCCGGTCCCTGGTTGTAATAGGGCCATGAATACCCGCCTCCATACAGCGCAAAATCGGGCGCCATCTCATAGCCTGTCAATTC # Questionable array : NO Score: 6.21 # Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,5] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.00,-13.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [10-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [53.3-78.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.92 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //