Array 1 353627-356154 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAAFDW010000004.1 Klebsiella pneumoniae strain 4-65 NODE_4_length_450135_cov_61.758577, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 353627 29 100.0 32 ............................. GAGCAGGCACCCGCCGCAACGACGAAGAGCGC 353688 29 100.0 32 ............................. AAATCAGCCAGCACCACGATTCTGGGAAATTT 353749 29 100.0 32 ............................. ACAGGCTTACCCGTATTGAGACGGTTGCTGAA 353810 29 100.0 33 ............................. GAAACCCCATCAGATGACCCTCCCCATGTTGGC 353872 29 100.0 32 ............................. TTGCCTGGTCTGCTTGGTGATGATCCGTGGTA 353933 29 100.0 32 ............................. TACAGAACGACTGAGGCGGCGTGTATTGCATA 353994 29 100.0 32 ............................. GATCTTAACTCTATTGCCAATGGCGCAATTCA 354055 29 100.0 32 ............................. GGCGATGCGCGCTCTGCTGGCTATCGGTAAAA 354116 29 100.0 32 ............................. AATGCAGCAACCGGCAAATATATCGCCGGTAA 354177 29 100.0 32 ............................. GGGCTGCCGCACGCCTGGGACGAGTCGAGCCC 354238 29 100.0 32 ............................. CCGCAATAACAAAAATAAATGAGGGTTAAAGT 354299 29 100.0 32 ............................. GTAAATGGGAATGAGTAGAAGAGCGTCATTGG 354360 29 100.0 32 ............................. CCCCCGCGCACATGCTTAAACGCGCTATCACG 354421 29 100.0 32 ............................. GGCATCTGTTGTGTAATGTTGAGTTTTTTTCA 354482 29 100.0 32 ............................. CAGGTTAAACATGTAAAAAATGACCGTCGCCG 354543 29 100.0 32 ............................. CACATTGCCCGGTCTGAAAAGTATTTGAAAAT 354604 29 100.0 32 ............................. TCCGCACAGTCAAACGCTCCAGACACCAACCC 354665 29 100.0 32 ............................. CCGGAACACCACCAGTAACAGCTACTGTAGGC 354726 29 100.0 32 ............................. TGACCCTGTTGATTTTGTTCCAGGTAATACGT 354787 29 100.0 32 ............................. TTAACCTCGTCGTTCTGGTTTCCGCCCAGGAT 354848 29 100.0 32 ............................. GAACCTGAATTCGAAGGGTGGGTCATCCTTCC 354909 29 100.0 32 ............................. GGACCCCGAGCGACCCGGTCACCCTCCGACCT 354970 29 100.0 32 ............................. CCGTCGAACGGCGGTTATATCCATCTTGAGTC 355031 29 100.0 32 ............................. ACCGATCCCACAATTGCGGCGGTTGAGATTGA 355092 29 100.0 32 ............................. TGCCGGACGTTGTACCTGTGAGTTAATTCTTC 355153 29 100.0 32 ............................. CGATAACCGGGCGTTTCGACTGAACTCACCTC 355214 29 100.0 32 ............................. TTAATACCAGGGGGCAGGTTCAGCAGGTCCCC 355275 29 100.0 32 ............................. CCGCTTTAACCCGCTCCGGCAGATCCGGGTGA 355336 29 100.0 32 ............................. CCCTCCGCTTTCAGGGTGTGGCTGATATCACC 355397 29 100.0 32 ............................. CGCGCTGCGAATTTGTTGGTCGATTTCGATCT 355458 29 96.6 32 .............A............... TGGGTAGAGGTTAACTGGTTATTGGTCATTGA 355519 29 100.0 32 ............................. ATCGCGGAGGCCTTCGGTGTGTCTCTTTCCTG 355580 29 100.0 32 ............................. CCGTTGTCAATATCTCCCGGCGTCCGCGCCAG 355641 29 100.0 32 ............................. CACGTCCGGAAACCACGGGTTATCCGTGTAAT 355702 29 100.0 32 ............................. CAGAGGTCCTTATCTTTTCAACGTCAAAGTCG 355763 29 100.0 32 ............................. GCAATCCCAGAGCGCGAATATCTTGGGCTCTC 355824 29 100.0 32 ............................. GACATGGCGCGCGAGTTTATCGACGCCTGCGC 355885 29 100.0 32 ............................. GGGATGAGCGTTTTCCGGTGGATTCTGATGTG 355946 29 100.0 32 ............................. GTGATCGTCATGGATATCACTGCCGTTCCGTC 356007 29 100.0 32 ............................. CAGACAGACAGCAGGCAGCAAACAGGGAAGAC 356068 29 100.0 29 ............................. GGGTTCACTTGGGTGAAACTGAACTAACT 356126 29 75.9 0 ...........ATTC...A......G..C | ========== ====== ====== ====== ============================= ================================= ================== 42 29 99.3 32 GTGTTCCCCGCGCCAGCGGGGATAAACCG # Left flank : GTGCTGTCTGCTGGCGAAATTGAACCGCCTCAACCACCGCCGGATATGCTGCCGCCGGCGATACCCGAGCCCGAGTCGATGGGAGATAAAGGGCATCGAGGGCATGGCTGATGAGTATGCTTATGGTGGTGACGGAAAATGTTCCACCTCGCCTGCGAGGACGGCTCGCAATCTGGCTGCTTGAGATCCGCGCTGGGGTATATGTTGGTGATACCTCAAAACGGATCCGGGAAATGATCTGGCAGCAGGTGATACAGCTAAGTGACGGTGGAAATGTCGTGATGGCCTGGGCGACAAACAGCGAATCAGGTTTTGAGTTTCAAACCTGGGGAGAAAACCGCCGTATACCGGTAGATTTAGATGGCCTACGACTGGTTTCATTCCTTCCCCTTGAAAATCAATGAGTTGGATGTTCTTTAATAATGTGAGATTGTTGTGATAAAGTTGGTAAATTGTTGTGTGCTTAAAAAGCTATTATAAAACAGTAATATATCTTTAGT # Right flank : CGTCCACTAACGTTATCGATCCTGAGAGTGGGCACGAAAGCTTGCGGAGAATAAATATCGCTACCTGCCGCTCTAGCGATATCACTGTTTTTTTACCGTCTCCTGGATCGCGCTAAAATCCGGCTCCGGGCAATCCCGACCAAAATTTTCGGCCCATGGGAACGGGGCGCCGTACTTAACATAGCGCTGATACAGGCGTTTGGTTAATTGAGCATCCCGCCCCCATACCCATCCTGTTGCATTACACAGCACGGCAGCATAGGCCTGTGATTTATATGGCAACAGGTCGGCCGCTTTTTCCGCCAGCGTCACCGCCTGCCAGCGATAGTGTAAGAAATGACTGTCCTGTTTTAGCAGGGATCGCTGAACGCGTTGCCGTTCGCCATCACTTATCCACGATGTCACGGCCGAATTATCTTCCGGTCCCTGGTTGTAATAGGGCCATGAATACCCGCCTCCATACAGCGCAAAATCGGGCGCCATCTCATAGCCTGTCAATT # Questionable array : NO Score: 6.22 # Score Detail : 1:0, 2:3, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.50,-12.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-8] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [76.7-51.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.92,0 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //