Array 1 446790-447917 **** Predicted by CRISPRDetect 2.4 *** >NZ_CABHCE010000003.1 Klebsiella grimontii strain 4928STDY7387684, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 446790 29 100.0 32 ............................. ATTAGGGGTAAAATGGGATGCCACCATCTCAT 446851 29 96.6 32 ............................T CGCTCTCTTCGGTCTGATCCGCATGGTCGATC 446912 29 100.0 32 ............................. CTACCGCCCTGGCCATTACTGAGCATAGTAAC 446973 29 100.0 32 ............................. GCACGGCGCGAAGCGCGATCAGCTGACCAGCT 447034 29 100.0 32 ............................. CTGTGACGTTACCTCCTCGGTGTCGTAGTCCG 447095 29 100.0 32 ............................. TGTGCGAGGGCCGGTGCGATTTGACCGGATTC 447156 29 100.0 32 ............................. AAACATGGCTGACCGCTGCTGAGTGTGTCGCG 447217 29 100.0 32 ............................. CGTTTTGCCGTGACACCCTCATCCCAGTAATC 447278 29 100.0 32 ............................. AACCTTAGCCATGATATAAAATTGGTCTTCAT 447339 29 100.0 32 ............................. GTGTCTCCATCCATAAGAACGAAGTGAGTGAC 447400 29 100.0 32 ............................. CAACCTGGACGCTGCAATGGATATTCACGCTG 447461 29 100.0 32 ............................. TTCTTTTGAGCAATACTACCTGAACCGTAAGG 447522 29 100.0 32 ............................. GGAGCATTTAAAAATCTGCTGCTGCACGCGCC 447583 29 100.0 33 ............................. AAATCCGCAGCCGCCGCGAAGTCGTTCGCGTGT 447645 29 100.0 32 ............................. GTCCATGATGTTGTGTTTTTTCACCCAGCTGA 447706 29 100.0 32 ............................. GTGATATCCCTTACCCAGGCTTCAAAAAGTTG 447767 29 100.0 32 ............................. TGCGCGCGCTTCTTCTTCATCCGCTCCTTTGG 447828 29 100.0 32 ............................. GGGCGGCCGGTAGTCGTCCTTTCCAATAATGA 447889 29 93.1 0 .............T..............A | ========== ====== ====== ====== ============================= ================================= ================== 19 29 99.5 32 GTGTTCCCCGCGCCAGCGGGGATAAACCG # Left flank : CGCGATATCGCGGTGTTCTCAAAGGGCAATATTCAGCGCCTGGTCGGCGCGCTGGCGGAGAGCCATCGCCTCACGCTGCATACGCGTTATCAGGTTGACTATATTGAAACGCTTTACGGCCTGGTGCGTTCCCGGCTGGCGGTGGCGATTCTGCCTGAGCTTTATACCACTCACCTTCAGGATCCGGCGTTAAAGGTGGCGCAACTTCAGCAGCCGGCGCTGACGCGAACCGTGGCGCTGATGCGCGGGCCGCAGCCTCTGCCGCCGCTGATAGAAGCGTGTTTTACATTATTACTGAGTTCGCTGCGGGAAGTGAATCTGTAGAGGCCGTTGCTCTCTCAGCTTGTTGTGGTGAAATGCGAGAGAGGTAACGGAATAGTTTCTTGTGCCTTTTAAAATCAAATAGTTATGGCTCTTTAAAAACATCAATTTGTTGCAAAAATGTCGGTAGATTGTTCTTGGTGGATAAATTTATTATAAAACAATAAGATATGGTTAGT # Right flank : ACAGTCAATGTTTCCCGAACATGGTTCTAAAGAGTGTTCCCCCGCAGCTGGCCGCCGCGGGGGCTGATTTACGGCGTCACGATATTGAACCAGAACTCAAATTTATCCATATAGCCCAGCATCTCATCCAGCTTCGCGCCATCGCCGGTCACTTTCACTTCACCCTTATCTTGCGCCTGTTTTAGCGTTTCCTCTTTCAGGATGATTTTGTTCAGCGTGGCGCGATCCAACGCAATGGTAGCATCCGCGTCCTTGGCTTCGGCATCGGCGGTGTGGTTGAGCACGCCGTTTTCCAGCTCCAGCTTATATTTACCGCCATCGTTACCCAGGTCGATATTGAACACCGCTTTGGCGGTTCCGGCTTTCTCACCATTAATATGCACCGCAAGGTAATCGAAGAACATTTCCGGGGTCATCGCCCGTACGGTATCCGGGCTGGCGGTGTTCGGCGTCGGGCCTTTCACTACGCCGTTGCGTAGCTCCTGAGCGCCGGTCAGGTA # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.50,-12.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [1-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [73.3-40.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.92,0 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 1 100237-102341 **** Predicted by CRISPRDetect 2.4 *** >NZ_CABHCE010000004.1 Klebsiella grimontii strain 4928STDY7387684, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 100237 29 100.0 32 ............................. TAGGGATTATTGTTTGTCTGTATGCCTACAGT 100298 29 100.0 32 ............................. CACTTTACTAACTTCCTTCAGCGTTACTTCGA 100359 29 100.0 32 ............................. AGGGTGTACAGGCTTTCAAAGATTATCAGGAT 100420 29 100.0 32 ............................. CATGAGCTGGGCGAGCTGCCGGTGATCAACGT 100481 29 100.0 32 ............................. CCTTCACGTCGGCGCTCCCCTTCTGCATTACG 100542 29 100.0 32 ............................. GTGACACGGTCGCCAAAATCACCGGCGTTTAT 100603 29 100.0 32 ............................. TGAATTTTTCCTTTCCGAACGGCATCTGCGGT 100664 29 100.0 32 ............................. TCTGTTTGTCTAAGCACGATCGTCCCTCGCAT 100725 29 100.0 32 ............................. AAGGGGAAGAAGTCACCGCTGACGGTGCCGGT 100786 29 100.0 32 ............................. ATTACGCCGCGCGTTCAGCCGCATGGTTTTAT 100847 29 100.0 32 ............................. TTGACTCCTGCGCCAGGTCGGGGCGCTGCCGT 100908 29 100.0 32 ............................. TTACCGCAAACGCGGCGCATAGCTTGATCACG 100969 29 100.0 32 ............................. CCGATCAAAGTCAAAACCGGGATCGTGATGCC 101030 29 100.0 32 ............................. CATCGCCCCGAGCTTATCCCGGCATATCGTGA 101091 29 100.0 32 ............................. CGACTGCTCGAGATTGCCGACGCGCTGGTCGT 101152 29 100.0 32 ............................. GCACTGAGGACAGAGGCGTGTAGTGTCAGAAT 101213 29 100.0 32 ............................. ACCATAGAACCAAAATCAACCTCAGGGTCAGC 101274 29 100.0 32 ............................. ACAACGCACCGCGGCAGAACAGCGAAAAGTTA 101335 29 100.0 32 ............................. ACCACGAATGAAAATGTGGCCAGGAAAGCCGA 101396 29 100.0 33 ............................. GTTGGCCAGGCATACGCAGCAAATGCCATTGCG 101458 29 100.0 32 ............................. ACTTGTTCAGAAAAAACCCCATTAGGAGGTTA 101519 29 100.0 32 ............................. GGTGCTTGCCTGGGTAAAACTGAACAGGCTTA 101580 29 100.0 32 ............................. CCGTTGATTTTTTCCGACGCTGGCTCAGTCTC 101641 29 100.0 32 ............................. CGCTTCCGTTTCCTGAGCATATAGGTCGCCAT 101702 29 100.0 32 ............................. CGACCGCCAGCGGCGTTGTTAAACACGCCTGG 101763 29 100.0 32 ............................. GTGATTCCAGCGTTAACCCGCAACAGTTCATG 101824 29 100.0 32 ............................. TAGCCCCTTCGAGTGACGGGTATTCCTGACCG 101885 29 100.0 32 ............................. CGTTGGATCGACGATGACTCCCCGTTAAAAAT 101946 29 100.0 32 ............................. TGAAAGAATTAACGCCGGGAGAAATGACGGCA 102007 29 100.0 32 ............................. GGTACTGCCCTGCACTGTCTGCTGCTGGAGCC 102068 29 100.0 32 ............................. ACAACGCAGCCAACTGAGATTCAGAAGGCAGC 102129 29 100.0 32 ............................. CGATCCACTTTCTCACCGCAGAGCAAAAAGAA 102190 29 100.0 32 ............................. CCTGCCGTTGACGTCAGACATCAGACACTAGC 102251 29 96.6 33 ............................A GCTCCCGCTGGACGCTTCGACATGTCTGCGAAT 102313 29 82.8 0 .....G......TC.......G.T..... | ========== ====== ====== ====== ============================= ================================= ================== 35 29 99.4 32 GTGTTCCCCGCGCTAGCGGGGATAAACCG # Left flank : GTGCTAGCTGCTGGTGAGATTGAGCCGCCTAAGCCAGCGCCAGATATGTTGCCGCCGGCGATACCAGAGCCACAGCGACTCGGCGACGGCGGGCATCGGGGGCATGGCTGATGAGTATGGTAGTTGTTGTTACGGAAAACGTGCCGCCGCGCCTGCGAGGACGGCTTGCCATATGGTTGTTAGAGATTAGGGCTGGCGTCTACGTCGGCGATGTTTCAAAACGTGTGCGGGAGATGATTTGGCAACAGATTACGCAATTAGGCGGCGCTGGAAATGTTGTTATGGCCTGGGCGACGAATACAGAGTCCGGTTTTGAGTTTCAAACTTGGGGAGAAAATCGACGTAGTCCGGTAGATTTGGACGGCCTGAGATTGGTTTCTTTCCTTCCCATTGAAAATCAGTAAGTTATAAGTTCTTTAATAAAAAGGAATTGTAGAACATAAGTTGGTAAATTGTTGCTCTCTGAAAATTGTAATAGAAAACAAATATATATATTTAGA # Right flank : GGTTTTTTCCCATACGCGCTCCGCATTCAGGGAATGTTCCCCGCGCCGCCATTCTTATTATCCTGTACTTTATTTTTTTACGTCATTATTTAGTGTGGCAAAGTCCAGTTCCAGTCAATACTTGCCAAAATTTTTGGCTCATGGGAACAGTGCGCCGTTTTTAACATAGCGCTTATACAGACGTTTTACCGATGCTGGGTTCTGAGCCCAAATCCAACCCGTCGTGCCAGACGCGCTGCCAGATATAAACCTGGTTGTCGGCGATGGACCGCGCGCTGGCAGCCAGTAGTAGAAACAACGGTATTAAAAAGCGAAAACGCATCATGGCGACAGTCCTTGTTGCCAGATTTTATCGTTAGTCTATTTTGAGGTGGGCTTCTTCTCCGCCTTCGCCAGCTCTTTCACCAGCGGCAGCATCACTTTCATCACATCGCGTCCGCGATGCTCAATCCGCCCCGGCAGCGCTTTATCAATATACTGCAGGTTATCCAACTGAAGGT # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCTAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [5,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGTTCCCCGCGCTAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.50,-12.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-6] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [78.3-48.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //