Array 1 266094-262166 **** Predicted by CRISPRDetect 2.4 *** >NZ_ULDW01000005.1 Klebsiella pneumoniae strain EuSCAPE_ES223, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 266093 29 100.0 30 ............................. CTCACGCTGATACCTCGGAAAAAGACGGGC 266034 29 96.6 32 .G........................... GCGGGCTGGGTTTTGTCGACTCTGCCGATCCG 265973 29 100.0 32 ............................. TAATATTGATAAATTCGATGAAGTAACCGGAA 265912 29 96.6 32 ............................A TCGAAGTACCAGCGCCGCACCGTGTTTTTTGC 265851 29 100.0 32 ............................. GTGGCCGGTGCTGCCAGTACGGTTACCGAAGT 265790 29 100.0 32 ............................. CATCCACGCTTCTGGCCACCAGGCAGATAATC 265729 29 100.0 32 ............................. GTGCTCCTCTTCCAGATACTGGGCCAGGAGCT 265668 29 100.0 32 ............................. TACAGGACGACAGCATCCTGGAACATTTCGAC 265607 29 100.0 32 ............................. CTCTGCGTGTGCGCCTCCGCTACGAGGTGACG 265546 29 100.0 32 ............................. TGAATATTCATTTACTAAATTAGAGACAATTC 265485 29 100.0 32 ............................. CGGATTAAACGTAAGGCCGCGCGCTGGCGTAA 265424 29 100.0 32 ............................. GTGGTTTGTTACCGTGTTGTGTGGCAAAAAGC 265363 29 96.6 32 A............................ GAACGGAGGAATATAAGAACAAAAGCCCGCAG 265302 29 100.0 32 ............................. TAAACCGCTGGCGTGGTCAGTTGCGTGGCGGT 265241 29 100.0 32 ............................. GGCGCCGGCCTGATCACTATCGGGTAACGGTG 265180 29 100.0 32 ............................. GGCCTGAACCAGAGCATGATCTACACCTGGAA 265119 29 100.0 32 ............................. ATTGGGTAGAGCAGGCGAACGGATGTCTTTTT 265058 29 100.0 32 ............................. TTTTCACGGTCGAAGTTGTGCATGCTTTCTGC 264997 29 100.0 32 ............................. TCGACGCCCCGGTGTGGGAAGACTTTGGCACC 264936 29 100.0 32 ............................. CAGCGCATACGGGTTAAACCGGATCACCTCTT 264875 29 100.0 32 ............................. ACATAGCGCCCGATACGCAGCGCCAGCGGGTA 264814 29 100.0 32 ............................. GATCGATCGTTATTGTTGAACCGCACTATGGT 264753 29 100.0 32 ............................. CTTTTAATAATATCATCGGCAATGTCCTTATC 264692 29 100.0 32 ............................. CGGGACCGGATCCGCGTGGGCGACCAGGATTA 264631 29 100.0 32 ............................. CACCGATATTCAGTGCGCCAACGCCATAGCAA 264570 29 100.0 32 ............................. CCGAGGTTTTTCATACCTTCGGCAGTCGTAGA 264509 29 100.0 32 ............................. CGGAAATTTTGATTAGTTGAATCTGTGCCATT 264448 29 100.0 32 ............................. CCGACTTGGGACGAGGATCCGGCGGAATGTCG 264387 29 100.0 32 ............................. TAATGGCAAAACCATGACCTGATCCGGGCGTC 264326 29 100.0 32 ............................. CCTGAATCTTCACTTCGTCGATCATTCTGCGC 264265 29 100.0 32 ............................. GGTCAAAAGGTTCATTCGAGCATCGAGTTGCA 264204 29 100.0 32 ............................. GTAACGCAGACGGCGAACGTCGGATCCATTGG 264143 29 100.0 32 ............................. GACCAGAAAGCCTGGGCATTGTTCCGCTCATT 264082 29 100.0 32 ............................. CCCCCGGCCGCGTGGCCGATTGCCATTACCGC 264021 29 100.0 32 ............................. TATACAGTATTATCATAGCGAATTCCCATCGG 263960 29 100.0 32 ............................. GTTGGTAATTACTGCTGTGTGTTACGGATAAA 263899 29 100.0 32 ............................. GCACCAACGTTTACGGTGCGGTGGTGAAACAA 263838 29 100.0 32 ............................. TGCCGGACGTTGTACCTGTGAGTTAATTCTTC 263777 29 100.0 32 ............................. CGATAACCGGGCGTTTCGACTGAACTCACCTC 263716 29 100.0 32 ............................. TTAATACCAGGGGGCAGGTTCAGCAGGTCCCC 263655 29 100.0 32 ............................. CCGCTTTAACCCGCTCCGGCAGATCCGGGTGA 263594 29 100.0 32 ............................. CGCGCTGCGAATTTGTTGGTCGATTTCGATCT 263533 29 100.0 32 ............................. TGGGTAGAGGTTAACTGGTTATTGGTCATTGA 263472 29 96.6 32 ........T.................... ATCGCGGAGGCCTTCGGTGTGTCTCTTTCCTG 263411 29 100.0 32 ............................. CCGTTGTCAATATCTCCCGGCGTCCGCGCCAG 263350 29 100.0 32 ............................. CTGCAGGTAAATGACTGGATGGGGGAAGAGGT 263289 29 100.0 32 ............................. CACGTCCGGAAACCACGGGTTATCCGTGTAAT 263228 29 100.0 32 ............................. CAGAGGTCCTTATCTTTTCAACGTCAAAGTCG 263167 29 100.0 32 ............................. GCAATCCCAGAGCGCGAATATCTTGGGCTCTC 263106 29 100.0 32 ............................. GACATGGCGCGCGAGTTTATCGACGCCTGCGC 263045 29 100.0 32 ............................. GGGATGAGCGTTTTCCGGTGGATTCTGATGTG 262984 29 100.0 32 ............................. TCCCCTACCACCCACTGAGCAAACTGGTAGCA 262923 29 100.0 32 ............................. CAGATACCAACGGTTACTACGGCAATCAGCAC 262862 29 100.0 32 ............................. AAGGTTGACCTGTTGTCGGCAACCATCGAGCC 262801 29 96.6 32 .........A................... GAGGCGCGCGTTGTCGTCGGTGAGATGCGCGA 262740 29 96.6 32 .....A....................... GCCATTCGTGCTTCTTCGCTTTGCTGCATCCA 262679 29 100.0 32 ............................. GAATATAAAACCAGATTCCATATAGCCCTGTG 262618 29 100.0 32 ............................. CCGGTTACGGGGATGACTGCAATTCGCTCCTG 262557 29 100.0 32 ............................. GGTCAAAAGGTTCATTCGAGCATCGAGTTGCA 262496 29 100.0 32 ............................. GCGGCGTCAGGTGTGTGGCAGAAAATTATTGC 262435 29 100.0 32 ............................. TCGTCTGAGTTCCGGCTTACGCCGTGCCGACA 262374 29 100.0 32 ............................. GTGATCGTCATGGATATCACTGCCGTTCCGTC 262313 29 100.0 32 ............................. CAGACAGACAGCAGGCAGCAAACAGGGAAGAC 262252 29 96.6 29 ............T................ GGGTTCACTTGGGTGAAACTGAACTAACT 262194 29 75.9 0 ...........ATTC...A......G..C | ========== ====== ====== ====== ============================= ================================ ================== 65 29 99.3 32 GTGTTCCCCGCGCCAGCGGGGATAAACCG # Left flank : AGGTGCTGTCTGCTGGCGAAATTGAACCGCCTCAACCACCGCCGGATATGCTGCCGCCGGCGATACCCGAGCCCGAGTCGATGGGAGATAAAGGGCATCGAGGGCATGGCTGATGAGTATGCTTATGGTGGTGACGGAAAATGTTCCACCTCGCCTGCGAGGACGGCTCGCAATCTGGCTGCTTGAGATCCGCGCTGGGGTATATGTTGGTGATACCTCAAAACGGATCCGGGAAATGATCTGGCAGCAGGTGATACAGCTAAGTGACGGTGGAAATGTCGTGATGGCCTGGGCGACAAACAGCGAATCAGGTTTTGAGTTTCAAACCTGGGGAGAAAACCGCCGTATACCGGTAGATTTAGATGGCCTACGACTGGTTTCATTCCTTCCCGTTGAAAATCAATGAGTTGGATGTTCTTTAATAATGTGAGATTGTTGTGATAAAGTTGGTAAATTGTTGTGTGCTTAAAAAGCTATTATAAAACAGTAATATATCTTTA # Right flank : GTCCACTAACGTTATCGATCCTGAGAGTGGGCACGAAAGATTGCGGAGAATAAATATCGCTACCTGCCGCTCTAGCGATATCACTGTTTTTTTACCGTCTCCTGGATCGCGCTAAAATCCGGCTCCGGGCAATCCCGACCAAAATTTTCGGCCCATGGGAACGGGGCGCCGTACTTAACATAGCGCTGATACAGGCGTTTGGTTAATTGAGCATCCCGCCCCCATACCCATCCTGTTGCATTACACAGCACGGCAGCATAGGCCTGTGATTTATATGGCAACAGGTCGGCCGCTTTTTCCGCCAGCGTCACCGCCTGCCAGCGATAGTGTAAGAAATGACTGTCCTGTTTTAGCAGGGATCGCTGAACGCGTTGCCGTTCGCCATCACTTATCCACGATGTCACGGCCGAATTATCTTCCGGTCCCTGGTTGTAATAGGGCCATGAATACCCGCCTCCATACAGCGCAAAATCGGGCGCCATCTCATAGCCTGTCAATTC # Questionable array : NO Score: 6.22 # Score Detail : 1:0, 2:3, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,5] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.00,-13.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [11-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [53.3-78.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.92 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //