Array 1 765290-765440 **** Predicted by CRISPRDetect 2.4 *** >NZ_PTRL01000001.1 Escherichia sp. MOD1-EC5433 MOD1-EC5433_1_length_896395_cov_71.1836, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 765290 29 100.0 32 ............................. TGGACGAGGCCATATTCAATGGCTTTTTCGTA 765351 29 100.0 32 ............................. CGCAACGGTGCGGCGATTGCTCTCGAGATCAA 765412 29 96.6 0 ............................T | ========== ====== ====== ====== ============================= ================================ ================== 3 29 98.9 32 GAGTTCCCCGCGTCAGCGGGGATAAACCG # Left flank : CTGGATGAATTGTTGGCGACGCTGACCGATGATAAACCGCGAGTAATTGCCCTTCAGCCGATTAGCCAGAAGGATGATGCCACGCGTTTGTGTATTGAAACCTGCATTGCGCGGAACTGGCGTTTGTCGATGCAAACGCATAAATATTTGAATATTGCCTGATTAAACATTTATAAGCGTTGAAAATGAGTGGAACCTGTAAATAACTCCACTCATTTATATTCTTTGTCGCCTCTGAAACTCCTCCATTTTGCCCATCCTGGACTAATCATTACCATTCACTACAAATTCTGTGGCGTTAATTTTTCGCTGGAGTGAAAATTATTGCGGTGAAGTTTGGTAGATTTTAGTTTTTATAGATTTATTTTAAATATTTACCTTTTCAGTCAATGGATTAAGTGCTCTTTAACATAGTAGATGTGTTGTTTGTGTGATCCTGTAAAGTTGGTAGATTGTGACTGGCTTAAAAAATCATTAATTAATAATAGGTTATGTTTAGA # Right flank : TTTCAGTAGGGTTCAGCCCGGGCAGTTTCCCGCCCGGTCTTCCTTACTTACGCATTCGACCAGCTCTGGATCGAATCCGCACTCCCCAGCTCACCATGCATCACTTCATACGATTTTTTCAAAATCACATCGGTGTGTTTGGTTAGGTCTTTGAAAATACCTTTATTCATCGCGTCGTAGCGTTTGGCATTGCACTCAACAGGCATAAAGATATCTTTCACGCGAACCATTTTGTCGATCGCCGTTGCGTAATCCGGATACAGACCCAGACCTACCGCGGTATTAATCGCCGCCCCCAAACTTGCACAGCCGTTAATGGCGTTACGCCGTGCCCCACATATCCAGAGCGCAACACCCTAACATAGCGTTACTTAAGGGAAATTGACCGCCGACACACTCTTATCATTCGCCGCGATAGATGCAACCTGCGGTGCAGGTTTCTTTCACCATAACCGCACTTAATAGCGGAACAACAGGTTTAACCTGATCCCAAATCCATT # Questionable array : NO Score: 5.31 # Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.02, 8:0.4, 9:0.69, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GAGTTCCCCGCGTCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [7,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GAGTTCCCCGCGTCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-14.90,-14.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [75.0-41.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.92,0 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 2 780114-780446 **** Predicted by CRISPRDetect 2.4 *** >NZ_PTRL01000001.1 Escherichia sp. MOD1-EC5433 MOD1-EC5433_1_length_896395_cov_71.1836, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 780114 29 100.0 32 ............................. ATGTTATGAATAAGTCACTAGAAGCCAATAAT 780175 29 100.0 32 ............................. TAATATCTCTGTTCCTATAGTCCGTTCCCGGA 780236 29 100.0 32 ............................. TCCCATGCGTGCCAGATAGCCCGTTTGATAAC 780297 29 96.6 32 ............C................ ACGCGCCGGTAGATGATAAAGGCCGAATTATC 780358 29 96.6 32 ............C................ TAATATTAAACTAACGTTTTCTTGTTGGTTCA 780419 28 82.8 0 ....A...T.............-.C...C | ========== ====== ====== ====== ============================= ================================ ================== 6 29 96.0 32 GTGTTCCCCGCGTCAGCGGGGATAAACCG # Left flank : GTACTTGCTGCCGGTGAAATTGAACCGCCACAACCTGCGCCGGATATGTTACCGCCAGCCATCCCCGAACCTGAAACGTTGGGCGATAGCGGTCACCGGGGGCGCGGCGGATGAGTATGATCGTAGTTGTAACGGAGAATGTTCCCCCACGTTTACGCGGACGGCTCGCTATCTGGCTACTGGAAGTCCGTGCTGGCGTTTATGTCGGTGATACATCCAAACGTATTCGGGAGATGATCTGGCAGCAAATTAGCCAACTGGCAGGTTGCGGAAATGTGGTAATGGCCTGGGCGACAAATACTGAGTCTGGTTTTGAGTTTCAGACCTGGGGCGAAAACAGACGTATTCCGGTGGATTTGGATGGGTTACGGTTGGTTTCTTTTCTTCCTGTTGAAAATCAATAGGTTGTCTGTTCTTTAAAAATGAGGAAATGTTTGAATTTGGTTGGTAGATTGTTGATGTGGAATAAATCGGTTTAAAAACAGATATATATGCTTAGT # Right flank : CAGCTTCTATTTTCAAACTCCTCAGGACGCCTTCGCCAGCTCCTTCACCAGCGGTAGCATTATCCGCATTACATCACGGCAGCGGCGTTCTATTCTTCCAGGAAGTGCCTTATCAATATGCTGTTGATTATCCAGTCTTACATCATGCCAGCTGGTTCCCTCAGGGAATGCGGCTGTTTTTGCGCGTTGCTGATAACCGTCTTTATTTCCCAGATTCCAGTTTGTCGCTTCCACCGAAAGTACGGCAATACCGGCTTTGTCGAAAACTTCGGCGTCATTACAACATCCGGTGCCTTTCGGATAATTTTTATTCAAACCCGGATTGGTCGTAGCGGCAATTCCATGACTGCGGGCAATTGCCAGCGCCCTGTCGCGCGTTAATGTCCTTACTGCTTCAGGGGTTTTTACGCCACTGTTGAAATACAATTTATCGCCGACAATTAAGTTATCGAGATTAATCACCAGCAGCGTATTTTTCCTTTCGGTATCACTCATCCGCT # Questionable array : NO Score: 6.06 # Score Detail : 1:0, 2:3, 3:0, 4:0.80, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGTCAGCGGGGATAAACCG # Alternate repeat : GTGTTCCCCGCGCCAGCGGGGATAAACCG # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [5,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGTTCCCCGCGTCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.50,-12.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-5] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [70.0-48.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //