Array 1 25872-22903 **** Predicted by CRISPRDetect 2.4 *** >NZ_NBYK01000005.1 Pseudomonas aestusnigri strain VGXO14 scaffold00005, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 25871 28 100.0 32 ............................ CGCTCGGCGATGACCTCCGGTGCCAAGCAAGT 25811 28 100.0 32 ............................ AGAGAAGTCGCATCGAATATCAAACTTGTTTT 25751 28 100.0 32 ............................ GCCCCAGCAGCGGATCTGCTGGGCATCTGGAA 25691 28 100.0 32 ............................ CGTGTCGTCGTGGTTCCCGACTACGTTGATGA 25631 28 100.0 32 ............................ AGTAGCGATGCTCGGTACGTCCCCACGCTTGC 25571 28 100.0 32 ............................ TCGGCCTTTGTCGCCGGTCGCTGTCCGGGTGA 25511 28 100.0 32 ............................ AGTCCGGCGCATTGGATGCCGTGCTGGGTAGT 25451 28 100.0 32 ............................ AGCTGCTAGCGCTGTGTCCCAGAACTGGGTAT 25391 28 100.0 32 ............................ TGGACGTCGCAACCGCAATGGGCACCGACCTC 25331 28 100.0 32 ............................ TGCTTGAGCTCAAGCGTCTGTACCCGAAAAGC 25271 28 100.0 32 ............................ ATCATGCACCCCGTGCAGTTTGCGCAGACTCT 25211 28 100.0 32 ............................ TTCTAGCGCGCCGGTTGAGACTATCCGCGTCC 25151 28 100.0 32 ............................ GTCTTGCCCGTGGACCCTATTCGACAAGCACC 25091 28 100.0 32 ............................ TGAGAAATGCATATTTATCCCGGGAACAATAA 25031 28 100.0 32 ............................ GAACCGTAGCCAGCACGGAACAGCACCACAAC 24971 28 100.0 32 ............................ AAGATGAAATTGACCGGAACGAAGACGCGAAA 24911 28 100.0 32 ............................ GGTATTGAGCGCGGCATCAAGCCGTGCCTGCT 24851 28 100.0 32 ............................ AGCGCTAAACGGCACCATTGATGCGGCTGATC 24791 28 100.0 32 ............................ GTCCCATTCCGCCATCATGGTCTCAAGCTCGA 24731 28 100.0 32 ............................ AGACGGTAATCGCGAACACTATCGCGCAAGAG 24671 28 100.0 32 ............................ GTCCAGGCCACCGGCATCAGCAAGGCGTTTCT 24611 28 100.0 32 ............................ GTAGTGATCCGGTCAAGAGGCGCAAGCGTCCC 24551 28 100.0 33 ............................ ACACCTTCCAGCTCACTTGTCTTGATTTCTACT 24490 28 100.0 32 ............................ GATAGGTTCCATCAGCGAGCGATAGAGCGACC 24430 28 100.0 32 ............................ TTCCATCAGCCGCTGCAGTGCCAGCTTCTGCT 24370 28 100.0 32 ............................ GCCAACGGATCTCCGCCAGCATCGTAGATCAT 24310 28 100.0 32 ............................ CAGAAGTCCAAAGGCATCAGTGACGCCGGCGA 24250 28 100.0 32 ............................ ACACCGTTGACCAAGGGCACGCTGACAACAAA 24190 28 100.0 32 ............................ AAGGACGTGATTACCGCGAAGTTCTGGGTTCG 24130 28 100.0 32 ............................ TGCACCTTGAAGCTGGCCAGCGAGACCGCGCC 24070 28 100.0 32 ............................ GGATCAGGCGCTGCCGGTTGTTGGGCGGTGTA 24010 28 100.0 32 ............................ AGCCGCGCTACCGCTGCGCTGCCGGGGTCCCC 23950 28 100.0 32 ............................ TACCACGGAGACCAGCAAGCTGTTACGTGCCA 23890 28 100.0 32 ............................ TCCAACGTCTCTGCATCGAAGATCATCGACTC 23830 28 100.0 32 ............................ GCGATACTTCTCGCAGGGTGATTCAGGGTCAC 23770 28 100.0 32 ............................ AGCAGCACGCCGCTGTCACGCGCCTGTGCATA 23710 28 100.0 32 ............................ TGCACATCCTTGAAAACGTCGCCGATCTTGTC 23650 28 100.0 32 ............................ AATGGACGGCACGCTGCAGGCCATCACCGACC 23590 28 100.0 32 ............................ TATCGAACGATCAGAGAATGCTATCCGGCGCA 23530 28 100.0 32 ............................ TTACTCCGGAAGAGTGGGAGTCCGCAGTCCAG 23470 28 100.0 32 ............................ TGATGCCACCAACCCCATGGGCGGCACCTACG 23410 28 100.0 32 ............................ GTTGCCCAGATCACGCAGCTCATACCACTTGC 23350 28 100.0 32 ............................ AGCATCTGCACCGCCTGGTACGCCAGCCACTG 23290 28 100.0 32 ............................ GGTCCAGCGCCATGCTGCTGACCCAACCGCCC 23230 28 100.0 32 ............................ GGCACCCTACACAGTGCAGTTCGCGCTGGAGT 23170 28 100.0 32 ............................ CGACTCTGACCGGTCGACCACAATGGCGCCCA 23110 28 100.0 32 ............................ CACAAATCCGAGCACTCGAAATGCAGGCGGAA 23050 28 100.0 32 ............................ TGTCTGAGATCCGCGCCGGGCGCAAAGAGTGG 22990 28 100.0 32 ............................ ATCGGATCAGAATAACCGCCCGGCTTGCCCAT 22930 28 82.1 0 .....................AT..GTT | ========== ====== ====== ====== ============================ ================================= ================== 50 28 99.6 32 CTTCACTGCCGTGTAGGCAGCTCAGAAA # Left flank : GCCCGGTTGACTGCGCATATGACGAAAACCTGGCTGGGAGGCATGCGAGATCACCTGGAAATAACGCGAGTTGAGCCTGTCCCTCCTATGGCAGTGCCCTATCAGGTGAGGCGTGTCCAAGCCAAATCCAATGCAGCACGACTGCGGAGGCGTTATTTGAAACGCCACCCAACTACAGACTCAAGCTCCGTTGTTGAGCTGATACCAGATAGGGTCGAGCGTCTTTTGGCATTACCGCATCTGCGTATCAACAGCACCAGCTCGGGGCAGCAGTTTCTGCTGTTCATTCAGCAGACCCAAGCGCCAGAAACTCGAACGGGTGAGTTCAACAGCTATGGCCTTAGCAGTACAGCTACGGTGCCTTGGTTCTGACCCTTTTTTAGGGCGCTCCATAACTGCCTTTGAAATCAAATGCTTGGTGTTTTTCTGAAAAAAAGGGAAAACACCAGGCAGGTGGTTTTGCTCTTTAAAAACCAATAATTTATGTGCAAGTATCTCTA # Right flank : CGTGGAAAATCTCTTTTATTGTTACGTTATAACAATTATAGTCTGCCCCGCGGTGTGTCAGCCACGCCGTTGCCAATACCAAATCGAAAGGGAGCAGCCATGTTTTCAAGCAAGACGCCTTTGACTCTGGCGCTGGCGGCGGTGGCCGCTGGTGTCTCTTCCGTGCAGGCAGCGGATGCGCCGCTGGATTTGCCGACGCTGACGGTCAGCGCCAGTGCGCTGAATCAGACTCCGGAGCAAATGGTTCAGCCGGCGGCGGTGCTGCAGGGTGAGGACTGGTTTGCGCTGCGTGAGACCGGGCTGGCGGACAGTCTGGAGTCGCTGCCGGGGGTGCGCGCTGCCGGGTTTGGCCCGGGCAGCAGCCGACCGGTGATTCGCGGGCTGGATGGTGCGCGGGTGCGGGTGCTCAGCGACGGTGCTGATGTGCTGGATGCTTCGACTATCAGCCCGGACCACGCGATCAGCGCCGATACCGCATTGATCGAGCGGGTGGAGGTACT # Questionable array : NO Score: 6.24 # Score Detail : 1:0, 2:3, 3:0, 4:0.98, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTTCACTGCCGTGTAGGCAGCTCAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [6,7] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTTCACTGCCGTGTAGGCAGCTCAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.70,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [5-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [60.0-65.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.65 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //