Array 1 21608-22115 **** Predicted by CRISPRDetect 2.4 *** >NZ_RADR01000180.1 Pseudomonas aeruginosa strain VET-75 PA2_B10_NODE_29_length_36764_cov_21.1667_ID_57, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 21608 28 100.0 32 ............................ AACCTGCTGACACGCCTGGGCGAGGACTTCGA 21668 28 100.0 32 ............................ AATATTCGAGCCGCCATCCTGCATCTCGAAGC 21728 28 100.0 32 ............................ TGCGGCGGCCGCAGGCCGAATGCGAAGCCCGG 21788 28 100.0 32 ............................ ACCGGCAGGACGTGATCGAGGTCGGCGTGCTC 21848 28 100.0 32 ............................ AGATCGTGATGCCTCCTGCATGCGAGAAGGGC 21908 28 100.0 32 ............................ ATCCTGAGGCTCAGTTGAGGTGATCCATGGCG 21968 28 100.0 32 ............................ GTCGAGCAGTTGATAGAGGAAATGCGCCGACA 22028 28 100.0 32 ............................ AGGACGGCGACTCGACCCTGGCGGTTCGGCTG 22088 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================ ================== 9 28 100.0 32 GTTCACTGCCGTGTAGGCAGCTAAGAAA # Left flank : GACATGTGTCCGCGTAGCGCCACCCTGTACGTGGACACCCATGCACTCCCCACGCACTTGTTCGACAACGCGAAAGTGCGCTTGAGGTCGGCGATCAACATCCTGGCCATGACCCGTTTGCTCGATGAGAAAGAAGAGCCCGGCGGCACCCTGGCCTACATCAACGGTGCGTTGCTGTCGCTGCTCAGCGATGCCTTGTCCGAAATCGAGGCGGGCCACCCGAGCCTGTAGCGCCGCTCCCTGGCGCGACGCCCCCGGCCTGGCCGGGGGCTTTGCGGCATCGCCATCACAAGACCTTTCGCGTCCGAACGGCACGCTTGATCGCCGTCCCGGTCCTCGCGAAACGGCCGCCAATTGCCCGAAGCTTCCGACCCTTTTTTCGGACGATTTCTTACGCCCTTATAAATCAGCAAGTTACGAGACCTCGAAAAAAGAGGGTTTCTGGCGGGAAAAACTCGGTATTTCTTTTTCCTTCAAATGGTTATAGGTTTTCGGAGCTA # Right flank : ACTCGAACCCACCTCGGCCACAACAGCCGCCGGGTTCGCTGCCGTCTAGGCAGAACCGCCCTCCCCATCCCACTACCAAACATCCGAATATAAAGTTCCTACCCCGCCCGCCAGCCTCGCCCGTCCACGACAATGTGCCCCGCTTGGAAGCTCACGCTCCTCATACAGACGAAAACGGGGTAGCGGCAATCGGCCATATCCGCTAAACATTTGCCTTGGCGCAGAATTCGATAGATCCGATAGGGACAGGCCACGGTCAACATGGACGACATTTCTCCCAGCGAACTGAAGTCGATCCTTCACTCCAAGTGTGCCAACCTGTACTACCTGCAACACTGCCGGGTACTGGTCAACGGCGGGCGGGTCGAGTACGTCACCGACGAAGGCCGGCATTCGCACTACTGGAACATCCCCATCGCCAACACCACCAGCCTGTTGCTGGGCACGGGTACCTCCATTACCCAGGCAGCCATGCGCGAACTGGCCAGGGCCGGGGTATT # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGTGTAGGCAGCTAAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [8,6] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTTCACTGCCGTGTAGGCAGCTAAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.00,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [60.0-30.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.51,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 2 32114-30640 **** Predicted by CRISPRDetect 2.4 *** >NZ_RADR01000180.1 Pseudomonas aeruginosa strain VET-75 PA2_B10_NODE_29_length_36764_cov_21.1667_ID_57, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 32113 28 100.0 32 ............................ TGTTTCCGAAGTGCAAACGGAACTTTGGCGAA 32053 28 100.0 32 ............................ TTCACGCGGGCGTTCGCTTCGTCCAGCTCGGC 31993 28 100.0 32 ............................ ATCGGCTGGTCGCTGATCCCGCTGGGTTGGAA 31933 28 100.0 32 ............................ AAATCACGCCGCCCGAATGCCACTTCGGACTC 31873 28 100.0 32 ............................ TCAACTGGGGAATGTCTACTTGCGAAGACTGC 31813 28 100.0 32 ............................ TGCTCCGGAAGGTACTGAAGCGCCCAGGTCGG 31753 28 100.0 32 ............................ AGCATTCGCAGCCCTGCAATGGGGCTGCTCGT 31693 28 100.0 32 ............................ TTAAGCCTCAATCGAAGTTCCACCCGGCTTGT 31633 28 100.0 32 ............................ AGGTGCTGGCGTCGATTGTCAGCGCGGTCAGA 31573 28 100.0 32 ............................ GGTCGGTGACGGCACCATTGGCGGCCAGGTCA 31513 28 100.0 32 ............................ CTCGACGGGGCTTGGCGCACCGGCGCCACTCC 31453 28 100.0 32 ............................ GAGCAGTTCTGGCCGTTGCTCTTAAGCGTGTA 31393 28 100.0 32 ............................ ACCGTGATTGTGCCCATGCGGCGCATGTGCAT 31333 28 100.0 32 ............................ ATGTAGTTGCCCTGCATGTTGATTTGCGTGGC 31273 28 100.0 32 ............................ TATGACCCGTCGTACGACTACGCCTCGAACAC 31213 28 100.0 32 ............................ AGGCAGACGAGTACGCGCGGTCTCGCGAAGTG 31153 28 100.0 32 ............................ AGAACATGGCCCGGCTCCCGACGTTGCTGCGG 31093 28 100.0 32 ............................ AGCAATGCGATCCGAGGACTCCAGAACGGTAT 31033 28 100.0 32 ............................ AACTCCCGCGCCAAGGGCGCCCGCGTAGAACT 30973 28 100.0 32 ............................ GATACAACCTGGCGATGGGGAACCAGGTGGAT 30913 28 100.0 32 ............................ ATGGTGACGCTGCACGACGGCCGCCAGGTGGC 30853 28 100.0 32 ............................ GTTTGCAGGAAGCGGCGCTATCGCACCGAACT 30793 28 100.0 32 ............................ ATAGCTACGCCGAGCCAGTTGTAAGCTGACGC 30733 28 96.4 32 ........................A... TGTCCCGAAGTTCATAAGCGGGCTTCGGGCGA ACGGAT [30709] 30667 28 75.0 0 T.........AC.....TC.TC...... | ========== ====== ====== ====== ============================ ================================ ================== 25 28 98.9 32 GTTCACTGCCGTATAGGCAGCTAAGAAA # Left flank : CGAAGTCGTCGAGGACGAACCAGGCCTGGTCGTCGATCAGCAGCGCGCGCAGCAATCGCTGCTGTCGGAAGAAGTAGTGCGGGGCAAGCTGGGTATGGCCGTGCATAGGAGAAATCCTTCTCTGAGCTGTCCGCTGCCTGGCTTCTGCCGGCGCGGCAGGGAGACAGGCCGCTCGTGGGTGTTGGGCCAGCAGGCTGTGGCCTGCCGGGAACCGAAGTCGCCGGCGAAAAAAGCCTACTGACAGCGCCTGTAGGACGGCAATGGCTAAGCCTTGTACGAAGTCTCCGATGGCACAAGCCCGCTGAACAGCTAGGCCGTTCTGAACATTACGCCGGCATGGAGAAAACAGGGGATGGACGCTATGCTTGGGAACCCTTTTTTTGGTGGTTTTTTAAAGCCCTTTTAGATCAGAGGGTTAGAGATCGCTGCAAAAAGAGGGTTTTTCCGGGCTTTGGCGCTGGAGCCCTTGGAGCTTGGAAGGTTGATGGGGTTTTGGTCTA # Right flank : CGGCCAGCAGCCCTGAAGTATCGATTGATGCGGTTCGCTGTCGGCCGGGGGTCACCAGTCGAAACGAAGTCCCTTTCCATGGGACTTCGTTGCGGACATGCCGATGAGGCGCTGACGGGGTTCTTCAGAACCAGGGAACGAAACCTCCTTTGCTCAACCCGTAACAGGTGAATCCTCCTTCCTCTGCCGTCGCCTGCAACGGCCCGTGGCGGATGAAGAGACGGAAGTGCTGTCCGGTGCTCTGGCTGCGTAGCGTGACGAAGGGCAGGTCCAAGGCTCTCGCGACCGTATCGGGAATGCGTTTCCGAGCCTCCTCCTCACTCAGATCGTGCCGGCGCATGAGCCGCCGCCGCAGACGTTCCGGATTGCTTTTCGCCTGAACCCGACTGACCTGACGGTACGGTGTGGGGTGAGGCACGACTGCCGGTTCTCCGAATTGCAGATGGTCCCGCAACCCTTCCAGCCAGGGCCGGGCGAGCAGGGCACGAAGGTCGTCCGCC # Questionable array : NO Score: 6.21 # Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGTATAGGCAGCTAAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.57%AT] # Reference repeat match prediction: R [matched GTTCACTGCCGTATAGGCAGCTAAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.70,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [14-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [35.0-45.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.55 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //