Array 1 125118-124723 **** Predicted by CRISPRDetect 2.4 *** >NZ_RWHR01000017.1 Escherichia fergusonii strain EFCF053 NODE_20_length_211740_cov_145.700851, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 125117 29 93.1 32 .A..........................C GAGGTGCCGCCAGTGTTATTTGATGCGATTTT 125056 29 96.6 32 .A........................... AGTGAGTCTCGTCGTCGTCGTGCATTGCGGGA 124995 29 100.0 32 ............................. GGAATCTGACAATACGGCAAAGGTGACTGTTG 124934 29 100.0 33 ............................. AGTCCTTAACCTCGGTACTAAAACGGTTAATGC 124872 29 100.0 32 ............................. CCTCTGGATTACTACCGATAACTAACACTGAA 124811 29 100.0 32 ............................. GTAATGCACTCACCACGGTTACAACAGATATT 124750 28 82.8 0 ............T.........-.CT..C | ========== ====== ====== ====== ============================= ================================= ================== 7 29 96.1 32 GTGTTCCCCGCGCCAGCGGGGATAAACCG # Left flank : CGTGCTTGCTGCTGGAGAAATACAACCGCCGGCCCCACCTGAAGATGCACAGCCTGTTGCCATTCCGCTTCCTGTTTCACTGGGAGATGCAGGCCATCGGAGTAGCTGAAATGAGTATGTTGGTCGTGGTCACTGAAAATGTACCTCCGCGCTTACGAGGCAGATTAGCCATCTGGTTGTTGGAGGTACGTGCAGGGGTATATGTAGGTGATGTATCCGCAAAAATTCGTGAAATGATCTGGGAACAAATAGCTGGACTGGCGGAAGAAGGCAATGTAGTGATGGCATGGGCAACGAATACGGAATCGGGATTTGAGTTCCAGACATTTGGGGTAAACAGGCGTACCCCGGTAGATTTGGATGGTTTAAGGTTGGTGTCTTTTTTACCTGTTTGAAAACAAAGAATTAGCTGATCTTTAATAATAAGGAAATGTTACATTAAGGTTAGTGGGTTGTTTTTATGGGAAAAAATGCTTTAAGAACAAATGTATACTTTGAGA # Right flank : AGCTCCCATTTTCAACCCCATCAAGACGCCTTCGCCAGTTCCTTCACCAGCGGTAGCATTATCCGCATAACGTCACGGCAGCGACGTTCTATTCTTCCAGGAAGCGCCTTATCAATATGCTGTTGATTATCAAGCCTTACATCATGCCAGCTATTTCCCGCCGGGAAGGCCGGTGTTTTTGCGCGTTGCTGATAACCATCCTTATTTCCAAGATTCCAGTTGGTCGCCTCCACCGAAAGTACCGCAATACCGGCTTTGTCGAAAACTTCTGCATCGTTACAACACCCGGTGCCTTTCGGATAGTTTTTATTCAAACCTGGATTTGTTGTCGCTGCAATCCCATGATTACGCGCAATTGCCAGCGCTCGATCACGGGTTAATTTCCTGACAGCTTCTGGTGTATTTACGCCACTATTAAAATAAAGCTTATCGCCCACGATCAAATTATCGAGATTAATCACCAGCAGGGTATTTTTCTTTTCAGTATCGCTCATGCGCTT # Questionable array : NO Score: 6.06 # Score Detail : 1:0, 2:3, 3:0, 4:0.80, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,5] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.00,-13.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [5-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [46.7-70.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.92 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 2 152494-150631 **** Predicted by CRISPRDetect 2.4 *** >NZ_RWHR01000017.1 Escherichia fergusonii strain EFCF053 NODE_20_length_211740_cov_145.700851, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= =================================== ================== 152493 29 100.0 32 ............................. CGAACGCATGGTCCACACAGAGAGCCAGTGGA 152432 29 100.0 32 ............................. CATTCAAACGAACGAACCACTTTCTGGTAACT 152371 29 100.0 32 ............................. CGATCACCGGCGGCGACCTGGTGGAAATCGAC 152310 29 100.0 32 ............................. CAAAATTAATTTTGTTTTATCCTCGTCCAATG 152249 29 100.0 32 ............................. ATCAGCCGGAATCTCTCGCCCCAACAGCAGCA 152188 29 100.0 32 ............................. TATTTGTTATAGCATAGCGAGACACAAATTAA 152127 29 100.0 32 ............................. CATCACGCCTCACTAATTGAAAAGCTAATATT 152066 29 100.0 32 ............................. TTGCCCAGGCTTTTGCGAAAATTTGTGATTTG 152005 29 100.0 32 ............................. GCTGGGTATGTAGATGGCTGGAACGCCTGTCG 151944 29 100.0 32 ............................. CCAGTCGCTTTCAATTTTCGGCGTGTAGCCTT 151883 29 100.0 32 ............................. ATTTGCCTCATATGCCTCTGAGTCAAAGTTCG 151822 29 100.0 32 ............................. CCCTGTTTTCACATGTTTTGTCACGGAAAAAT 151761 29 100.0 32 ............................. TAAACGAGACGCCAGAGGAAATAATAAAAATG 151700 29 100.0 32 ............................. GGCTGGCCTGACAGGTTGCATTCCTCTGATGT 151639 29 100.0 32 ............................. CCAGTCGCTTTCAATTTTCGGCGTGTAGCCTT 151578 29 100.0 32 ............................. GCCGAATTATCAGCGAAGAGTACGCAAAAGAG 151517 29 100.0 32 ............................. CAACTGAATTTCAATCAATAGCAACGGGTTTT 151456 29 100.0 32 ............................. GTCAGTTAATCCCGACCGATGCCGGCACAAAG 151395 29 100.0 32 ............................. CCAGCTCTGATTACTCCACGGCAATAGGTTAC 151334 29 100.0 32 ............................. TGCCTCTATCCGATCCGGACTTGTCACGCGAA 151273 29 100.0 32 ............................. TTTCAGCGAGCGGTTATAAACGACCTGCGCAT 151212 29 100.0 33 ............................. GACCTGGAATATCGTTTCGGGCGCGACTCTTAC 151150 29 100.0 32 ............................. GTCAGGATTTGGAGAATATGTCTCCAGTAGAC 151089 29 100.0 32 ............................. TCTGATTCCGAACAAACCTAGCGGGCGAATTC 151028 29 100.0 32 ............................. TACAGTACCAGGCGGAGATTACCCGTTTTGAG 150967 29 100.0 32 ............................. AAATCAATCTATAGCGTCAGTAAATGGAATTA 150906 29 100.0 32 ............................. GGTATAGTTCCAACATACACGCCTATAAAAGA 150845 29 96.6 35 ............................A CCGTTTATTCTTATCGCTGGCGTTAACGTCCACAA 150781 29 93.1 32 .........A..T................ CCGAAAGTGGGCGACTACGCGGTCAACGAAGA 150720 29 100.0 32 ............................. GACACAGAGCGCCGCTATAGCGCCTATGCCAA 150659 29 89.7 0 ...........A........A.......A | ========== ====== ====== ====== ============================= =================================== ================== 31 29 99.3 32 GAGTTCCCCGCGCCAGCGGGGATAAACCG # Left flank : CTGGATGAACTACTGGCAACGCTGACCGATGATAAACCACGAGTCATTGCACTGCAGCCAATTAGCCAGAAGGACGATGCCACACGTTTGTGCATTGAAACCTGTATTGCGCGTAACTGGCGTTTATCGATGCAAACACATAAATATTTAAATATTGCCTGATTAAACATTTATAAGCGTTATAAATGGGTGGAACCTGTAAAGACTTCCACTCATTTATATTCTTTGTCGCCTCTGAAAAAACTCCATTTTGCCCATTCTGGACTAATCATTATCATTCTCTACAAATTCTGTGGCGTTAATTTTTCGTTGGAGTGAAAATTATTGCGGTAAAGTTTGGTAGATTTTAGTGGGTATAGAGTTATTTTAAATATTTACTTTTTTAATCAATGGATTAAGTGTTCTTTAACATAATGGATGTGTTGTTTGTGTGATCCTGTAAAGTTGGTAGATTGTGACTGGCTTAAAAAATCATTAATTAATAATAGGTTATGTTTAGA # Right flank : CCATATAACCCGTTATCTCTTTCTCAAGTTTTTATATTAGCAGTACTCGTATTAAGCAACATATCCACGTAACACCTCATGTTCAAAATAGCTCTCCATATATGAGAAGTTCACAATTATCGATACAAAAAATCAAATTTAATTAAAGTATTAGTTGTATGATACTTAAATCATTAAGAAATTATCATATATTATTTTTTTAATATTGAATTGATGTTTGTTAATTTTTTTCTTTAGGATAACGGTTTGTTTTTTAAGCTTATTATTCATTGATTAAGTAATGAATCTCGAAATTTGTCTTTGTTTTGAGGCTAATGAGTGATTTTACATAATCGCCTCTATACGCTGTTGATGAATAGTTCTTATGAATAAAGATATCCAGTTCATACTTTAAGTGAAAATTGATAAAGTACGATTCGCGTAGTCTTTTATTCTAAGGACATCGATTGTAGTTAATATTCCTTGTAAAAACAGGGATAAACCGGACTTGTTATAATTCT # Questionable array : NO Score: 6.22 # Score Detail : 1:0, 2:3, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GAGTTCCCCGCGCCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [3,6] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GAGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.00,-13.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [6-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [66.7-75.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.65 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //