Array 1 41754-37492 **** Predicted by CRISPRDetect 2.4 *** >NZ_SJUS01000005.1 Exiguobacterium sp. SH5S13 SH5S13_5_length_123728_cov_29.2077, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =============================== ======================================== ================== 41753 31 100.0 36 ............................... ATTCATGTTCAACCCTCCATCCGTGATGCGTACCAA 41686 31 100.0 35 ............................... AGTTTCGGGCGGTAACGTTTCATCTTCCATGATTA 41620 31 100.0 34 ............................... TAAAATGACAAAGACAAACCTTATTACAGTATCA 41555 31 100.0 35 ............................... TTGATCAAGCCGACGAACCTCGGGAAGAGCCGAGA 41489 31 100.0 35 ............................... AGCTACTGGGGCGAGACGTATCACCTATCCGCCGA 41423 31 100.0 35 ............................... AACTCATCCCGCACGACGTGAGAAAGCGCCACGTA 41357 31 100.0 34 ............................... AATTCTGTGACACCGTCATCTTTTACAGCCATCA 41292 31 100.0 35 ............................... TAAGAACGCGTTGCCCGTCTCTTCACGGTCGCGCA 41226 31 100.0 36 ............................... GAAAAGTGTGAAATGAGGTGTGCAATGGGCAAGTAA 41159 31 100.0 35 ............................... CAGGACCACTGGCGGCCTTGGGAGTCCGGCAAACA 41093 31 100.0 35 ............................... GATTTGGAGCAGACGAAAGTCTAAATCGACGAGGA 41027 31 100.0 35 ............................... CATGACTCGTGCCAGATCGAAGGGGTAGGCGAAGA 40961 31 100.0 34 ............................... TCCCGTGCCGAGGAGGCATTGTCAGAACTCGGGA 40896 31 100.0 35 ............................... ACATTCTCGCTCGACGGGATTGGACAGATCGTGAA 40830 31 100.0 36 ............................... GTCCATGTGGGTGTTACTTCGTCGCCCGTGTTGATA 40763 31 100.0 34 ............................... GATAACGCCGTGTACATCTGCAGCGTCGCGGATA 40698 31 100.0 35 ............................... GTCTCGCCATGTCTGTACATTACCTTGCGTGTACA 40632 31 100.0 36 ............................... AGCGGCCACGCGATAGCCTCGCAAACTTACGCCTCA 40565 31 100.0 34 ............................... CCTTCGGCCCGCTCTGGTGCGTTCGGGTCAATCA 40500 31 100.0 34 ............................... CTTTAGCAGCGAACGCGACGCACTCTTTCGACGA 40435 31 100.0 35 ............................... TCTGCCGCGTCGATAAACTCGCCTTGCGTGAGCAA 40369 31 100.0 36 ............................... GAAATTGATACGAAGGAGTTGCTCGCATGAACGAAA 40302 31 100.0 34 ............................... CATCATGACGAGGATTTTGAGGAGTAGCGGGTCA 40237 31 100.0 35 ............................... CTGTTATCCCTAACACTAGTTCGACATTAAACATA 40171 31 100.0 35 ............................... GTGATCGGGTTATTGTTGTAATTGATGCGTTTCGA 40105 31 100.0 36 ............................... ATAACGTGTCGGCTATATCGGCCGGTGATTATCGCA 40038 31 100.0 35 ............................... GACTATCTCGGTTCACAGCTCGACCTCATCAACGA 39972 31 100.0 37 ............................... ATAGAGGAAGCGGAAGCCATGAGAGAGCGTAACCCGA 39904 31 100.0 34 ............................... TCAAGCGATTGCGTCATTGCGTCTATCTTCTCAA 39839 31 100.0 34 ............................... TTCGGGTTCGACCCGAACGCTAAAAACAACGGTA 39774 31 100.0 36 ............................... TCCGGTATCCCGATCGCTTACAACTATGATGCGGAA 39707 31 100.0 36 ............................... TCCATCTCGTCGTCCAACAAGTCCATGAACCCGTCA 39640 31 100.0 40 ............................... CCGCGCCTCAGATGTGGCAATCAAAGGATTCCAGACACCA 39569 31 100.0 35 ............................... CCGCTTCTGCGAGCAACGCCGTTTCGATACCGCGA 39503 31 100.0 33 ............................... ATCCCGTACATCATTAATGAGCTTGGTGAGCGA 39439 31 100.0 34 ............................... GTAATTCGAATGTGATTCGATGGTTGCTCAAATA 39374 31 100.0 35 ............................... TTGCACGAGCCATCCTTGCAACGCGAGCGGCTTGA 39308 31 100.0 36 ............................... ATGGGCAGCGCGACGATTGATGAAGTCACAGTCGAA 39241 31 100.0 37 ............................... GACAAGTGCTTGATAGCAATCTGCGCGAAGGTTTGAA 39173 31 100.0 35 ............................... GTTATCCGCACACCGCAAGCAGTCGCTTACCTCGA 39107 31 100.0 36 ............................... TATGACGGCAACACGAAGACGAATGAGCGGTTTCAA 39040 31 100.0 35 ............................... GTCTGCCAAATGATGACCCCCTTGCTGTGATGTGA 38974 31 100.0 35 ............................... CCGATCGAAGCACCTTATGACGATGTGGCGACATA 38908 31 100.0 35 ............................... TTGTCGATTGCTTCGAGCACCTTCGCGCCCATCTA 38842 31 100.0 34 ............................... ACGGAAGCTGACCTCCGAGCGGCATATGACGCCA 38777 31 100.0 36 ............................... AAATCGAACGCGTTGAAATTGTTTGCTGATAGTGGA 38710 31 100.0 34 ............................... ACCTCAGGAATACAGTCTGAGATGGACAACCATA 38645 31 100.0 34 ............................... GTCTTTCGTCATTGTCATCACCTCCTCTCCCTGA 38580 31 100.0 35 ............................... ACTCCCCCTCACCTCCTAACGCGTCGAAACAATCC 38514 31 96.8 36 A.............................. TTCCATCTCCGCGAGTTCTCGCACGAGACAGAGGCA 38447 31 100.0 34 ............................... CATGACTCAAAGCCTTTAAAGGCTCTATCAGAAA 38382 31 100.0 34 ............................... TTTATTTTCGATACGTTTTAAGTTATACTCACGA 38317 31 100.0 36 ............................... CGCATATCACGTTCAAACCGTAGCAACGAGTTACGA 38250 31 100.0 35 ............................... AACACAGTCATCTGAGCAATAACAATGAGTGTCAA 38184 31 100.0 34 ............................... TTTTATGATGTTGTATTGCTTCGCGTTTTTGTAA 38119 31 100.0 34 ............................... TTTTATGATGTTGTATTGCTTCGCGTTTTTGTAA 38054 31 100.0 34 ............................... CTGCCCGTATTCGGCAAGCTCCTGCGTCCCACGA 37989 31 100.0 35 ............................... TGCCATTGCGTTTTATTACAATACGGCTGTTGCTA 37923 31 100.0 40 ............................... CTATAGCGAGACACCGTCGTAACAATCACGAAGCGTCACA 37852 31 100.0 36 ............................... TCATTGCATCTCCCTTTCATAACAGATTAGGCAGGA 37785 31 100.0 34 ............................... GCGGAATGGGAAACGCTTGTTTATGAAGTCCCGA 37720 31 100.0 35 ............................... CTCGGTCAGCATCTTCGGCAGTCGGTCGAGCGGCA 37654 31 100.0 34 ............................... CGCTATGTCTATAAGGCACGTCCTGATTCCGAGA 37589 31 93.5 36 ........T.C.................... ACATCGACCCGTTTCACGAAGAACGCGAGGATAAGG 37522 31 80.6 0 ......CT.G...AG...............A | ========== ====== ====== ====== =============================== ======================================== ================== 65 31 99.6 35 TCGCACTCCATGTGAGTGCGTGGATTGAAAT # Left flank : AACTTTCTTGCATAAGTGAGGGATGCATGTGCTCGTTTTAGTGACATATGATGTGAATACTATCTCACCCGGAGGCACGAAACGGCTTAGACAAGTAGCAAAAGTTTGTCAGCAGTACGGTCAGCGAGTTCAGAATAGTGTGTTTGAATGTATCGTTGATCAGACAGAATTTACGACCTTGAAATTGCGGTTACAAGAGATTGTAGACGTAGACCGTGATAGTCTTCGTTTTTATAGACTTGGGAACCAACATGTATCTAAAGTAGAGCATTATGGAGTGAAAGAATCTTTAGATTTGGAAGGCCCTCTCATTTTTTAAAGATGAAGGTGTTTTCAGTGAGTGCGAACTTGAAGTGCACATCATTTTCTAGAGAGGTTCGCACCTGGTTTTTATAAAGTTTTTGAATGAAAGATCAACGAATCTAGTCTTCGGAATACAAAAATAGGTAATATTGTTTATCACATTTATTTTAGTCGGTTTTTTTAGCTTAAATCGGCTA # Right flank : GGCATAATCAGTATCATAAGCATTGACATTTCTAAGTGACTTACATCGTTTTTACAGGCAAATGGACGAACCTCCTCAGAGATTCGTCCATTTGCCTGTAAATTAATTTCATGTTTGTTTAGTTTGCGCGTTTCAATTCTTTGTTTATATCTTCTTGTTTGAAATCAAGGTTTCGAACATCAACCCGTTTCACAAAGAACGCCAAGATGAGCGCTAGGATGTTCATCCCTAATGCGACGTAGAACGACACTTGAATCCCTGACAGTAGCGCTTGTTGCGTTAACGCGCCCATCCCGCTCTCAGTGAGTGTCGACGGGTCGACGCCGGTCATGAGTGACTCGGCTTCAGTCCGCGTCACTGAGTTCATAATTGTCACCAAAATAGCCGTTCCAATCGCACCGGACACTTGTTGTGCCGTGTTGTTGATGGCCGTACCGTGTGGGTTAAGGCTCGTCGGCAATTGGTTGAGACCGTTTGTTAAAATAGGCATCATCACCATC # Questionable array : NO Score: 9.24 # Score Detail : 1:0, 2:3, 3:3, 4:0.98, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : TCGCACTCCATGTGAGTGCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.12%AT] # Reference repeat match prediction: R [matched TCGCACCCCATGCGGGTGCGTGGATTGAAAT with 91% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-2.50,-8.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [11-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [65.0-75.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,10.05 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 1 30-192 **** Predicted by CRISPRDetect 2.4 *** >NZ_SJUS01000096.1 Exiguobacterium sp. SH5S13 SH5S13_96_length_222_cov_58.9684, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =============================== ==================================== ================== 30 31 100.0 36 ............................... CGCATATCACGTTCAAACCGTAGCAACGAGTTACGA 97 31 100.0 34 ............................... CATGACTCAAAGCCTTTAAAGGCTCTATCAGAAA 162 31 100.0 0 ............................... | ========== ====== ====== ====== =============================== ==================================== ================== 3 31 100.0 36 TCGCACTCCATGTGAGTGCGTGGATTGAAAT # Left flank : TTTCGATACGTTTTAAGTTATACTCACGAT # Right flank : TTTATTTTCGATACGTTTTAAGTTATACTC # Questionable array : NO Score: 8.67 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.02, 8:0.4, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : TCGCACTCCATGTGAGTGCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:51.52%AT] # Reference repeat match prediction: F [matched TCGCACCCCATGCGGGTGCGTGGATTGAAAT with 91% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.10,-2.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [31.7-36.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [9.78,0 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //