Array 1 248167-250694 **** Predicted by CRISPRDetect 2.4 ***
>NZ_CAJHQE010000005.1 Klebsiella pneumoniae isolate Kp5174, whole genome shotgun sequence Array_Orientation: Forward
Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion
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248167 29 100.0 32 ............................. TTAACCATTCTCCCCGGCTCAGTACCTGCCCG
248228 29 100.0 32 ............................. GAGCAGGCACCCGCCGCAACGACGAAGAGCGC
248289 29 100.0 32 ............................. AAATCAGCCAGCACCACGATTCTGGGAAATTT
248350 29 100.0 32 ............................. ACAGGCTTACCCGTATTGAGACGGTTGCTGAA
248411 29 100.0 33 ............................. GAAACCCCATCAGATGACCCTCCCCATGTTGGC
248473 29 100.0 32 ............................. TTGCCTGGTCTGCTTGGTGATGATCCGTGGTA
248534 29 100.0 32 ............................. TACAGAACGACTGAGGCGGCGTGTATTGCATA
248595 29 100.0 32 ............................. GATCTTAACTCTATTGCCAATGGCGCAATTCA
248656 29 100.0 32 ............................. GGCGATGCGCGCTCTGCTGGCTATCGGTAAAA
248717 29 100.0 32 ............................. AATGCAGCAACCGGCAAATATATCGCCGGTAA
248778 29 100.0 32 ............................. GGGCTGCCGCACGCCTGGGACGAGTCGAGCCC
248839 29 100.0 32 ............................. CCGCAATAACAAAAATAAATGAGGGTTAAAGT
248900 29 100.0 32 ............................. GTAAATGGGAATGAGTAGAAGAGCGTCATTGG
248961 29 100.0 32 ............................. CCCCCGCGCACATGCTTAAACGCGCTATCACG
249022 29 100.0 32 ............................. GGCATCTGTTGTGTAATGTTGAGTTTTTTTCA
249083 29 100.0 32 ............................. CAGGTTAAACATGTAAAAAATGACCGTCGCCG
249144 29 100.0 32 ............................. CACATTGCCCGGTCTGAAAAGTATTTGAAAAT
249205 29 100.0 32 ............................. TCCGCACAGTCAAACGCTCCAGACACCAACCC
249266 29 100.0 32 ............................. CCGGAACACCACCAGTAACAGCTACTGTAGGC
249327 29 100.0 32 ............................. TGACCCTGTTGATTTTGTTCCAGGTAATACGT
249388 29 100.0 32 ............................. TTAACCTCGTCGTTCTGGTTTCCGCCCAGGAT
249449 29 100.0 32 ............................. GAACCTGAATTCGAAGGGTGGGTCATCCTTCC
249510 29 100.0 32 ............................. GGACCCCGAGCGACCCGGTCACCCTCCGACCT
249571 29 100.0 32 ............................. CCGTCGAACGGCGGTTATATCCATCTTGAGTC
249632 29 100.0 32 ............................. ACCGATCCCACAATTGCGGCGGTTGAGATTGA
249693 29 100.0 32 ............................. TGCCGGACGTTGTACCTGTGAGTTAATTCTTC
249754 29 100.0 32 ............................. CGATAACCGGGCGTTTCGACTGAACTCACCTC
249815 29 100.0 32 ............................. TTAATACCAGGGGGCAGGTTCAGCAGGTCCCC
249876 29 100.0 32 ............................. CCGCTTTAACCCGCTCCGGCAGATCCGGGTGA
249937 29 100.0 32 ............................. CCCTCCGCTTTCAGGGTGTGGCTGATATCACC
249998 29 100.0 32 ............................. CGCGCTGCGAATTTGTTGGTCGATTTCGATCT
250059 29 96.6 32 .............A............... TGGGTAGAGGTTAACTGGTTATTGGTCATTGA
250120 29 100.0 32 ............................. ATCGCGGAGGCCTTCGGTGTGTCTCTTTCCTG
250181 29 100.0 32 ............................. CCGTTGTCAATATCTCCCGGCGTCCGCGCCAG
250242 29 100.0 32 ............................. CACGTCCGGAAACCACGGGTTATCCGTGTAAT
250303 29 100.0 32 ............................. CAGAGGTCCTTATCTTTTCAACGTCAAAGTCG
250364 29 100.0 32 ............................. GCAATCCCAGAGCGCGAATATCTTGGGCTCTC
250425 29 100.0 32 ............................. GGGATGAGCGTTTTCCGGTGGATTCTGATGTG
250486 29 100.0 32 ............................. GTGATCGTCATGGATATCACTGCCGTTCCGTC
250547 29 100.0 32 ............................. CAGACAGACAGCAGGCAGCAAACAGGGAAGAC
250608 29 100.0 29 ............................. GGGTTCACTTGGGTGAAACTGAACTAACT
250666 29 75.9 0 ...........ATTC...A......G..C |
========== ====== ====== ====== ============================= ================================= ==================
42 29 99.3 32 GTGTTCCCCGCGCCAGCGGGGATAAACCG
# Left flank : GTGCTGTCTGCTGGCGAAATTGAACCGCCTCAACCACCGCCGGATATGCTGCCGCCGGCGATACCCGAGCCCGAGTCGATGGGAGATAAAGGGCATCGAGGGCATGGCTGATGAGTATGCTTATGGTGGTGACGGAAAATGTTCCACCTCGCCTGCGAGGACGGCTCGCAATCTGGCTGCTTGAGATCCGCGCTGGGGTATATGTTGGTGATACCTCAAAACGGATCCGGGAAATGATCTGGCAGCAGGTGATACAGCTAAGTGACGGTGGAAATGTCGTGATGGCCTGGGCGACAAACAGCGAATCAGGTTTTGAGTTTCAAACCTGGGGAGAAAACCGCCGTATACCGGTAGATTTAGATGGCCTACGACTGGTTTCATTCCTTCCCCTTGAAAATCAATGAGTTGGATGTTCTTTAATAATGTGAGATTGTTGTGATAAAGTTGGTAAATTGTTGTGTGCTTAAAAAGCTATTATAAAACAGTAATATATCTTTAGT
# Right flank : CGTCCACTAACGTTATCGATCCTGAGAGTGGGCACGAAAGCTTGCGGAGAATAAATATCGCTACCTGCCGCTCTAGCGATATCACTGTTTTTTTACCGTCTCCTGGATCGCGCTAAAATCCGGCTCCGGGCAATCCCGACCAAAATTTTCGGCCCATGGGAACGGGGCGCCGTACTTAACATAGCGCTGATACAGGCGTTTGGTTAATTGAGCATCCCGCCCCCATACCCATCCTGTTGCATTACACAGCACGGCAGCATAGGCCTGTGATTTATATGGCAACAGGTCGGCCGCTTTTTCCGCCAGCGTCACCGCCTGCCAGCGATAGTGTAAGAAATGACTGTCCTGTTTTAGCAGGGATCGCTGAACGCGTTGCCGTTCGCCATCACTTATCCACGATGTCACGGCCGAATTATCTTCCGGTCCCTGGTTGTAATAGGGCCATGAATACCCGCCTCCATACAGCGCAAAATCGGGCGCCATCTCATAGCCTGTCAATT
# Questionable array : NO Score: 6.22
# Score Detail : 1:0, 2:3, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1,
# Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat : GTGTTCCCCGCGCCAGCGGGGATAAACCG
# Alternate repeat : NA
# Directional analysis summary from each method:
# Motif ATTGAAA(N) match prediction: NA Score: 0/4.5
# A,T distribution in repeat prediction: F [5,4] Score: 0.37/0.37
# Reference repeat match prediction: F [matched GTGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5
# Secondary Structural analysis prediction: F [-13.50,-12.00] Score: 0.37/0.37
# Array degeneracy analysis prediction: F [0-8] Score: 0.41/0.41
# AT richness analysis in flanks prediction: F [76.7-51.7]%AT Score: 0.27/0.27
# Longer leader analysis prediction: NA
# ----------------------------------------------------------------------------
# Final direction: F [5.92,0 Confidence: HIGH]
# Array family : I-E [Matched known repeat from this family],
//