Array 1 248167-250694 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_CAJHQE010000005.1 Klebsiella pneumoniae isolate Kp5174, whole genome shotgun sequence		Array_Orientation: Forward

  Position	Repeat	   %id	Spacer	Repeat_Sequence              	Spacer_Sequence                  	Insertion/Deletion
==========	======	======	======	=============================	=================================	==================
    248167	    29	 100.0	    32	.............................	TTAACCATTCTCCCCGGCTCAGTACCTGCCCG 	
    248228	    29	 100.0	    32	.............................	GAGCAGGCACCCGCCGCAACGACGAAGAGCGC 	
    248289	    29	 100.0	    32	.............................	AAATCAGCCAGCACCACGATTCTGGGAAATTT 	
    248350	    29	 100.0	    32	.............................	ACAGGCTTACCCGTATTGAGACGGTTGCTGAA 	
    248411	    29	 100.0	    33	.............................	GAAACCCCATCAGATGACCCTCCCCATGTTGGC	
    248473	    29	 100.0	    32	.............................	TTGCCTGGTCTGCTTGGTGATGATCCGTGGTA 	
    248534	    29	 100.0	    32	.............................	TACAGAACGACTGAGGCGGCGTGTATTGCATA 	
    248595	    29	 100.0	    32	.............................	GATCTTAACTCTATTGCCAATGGCGCAATTCA 	
    248656	    29	 100.0	    32	.............................	GGCGATGCGCGCTCTGCTGGCTATCGGTAAAA 	
    248717	    29	 100.0	    32	.............................	AATGCAGCAACCGGCAAATATATCGCCGGTAA 	
    248778	    29	 100.0	    32	.............................	GGGCTGCCGCACGCCTGGGACGAGTCGAGCCC 	
    248839	    29	 100.0	    32	.............................	CCGCAATAACAAAAATAAATGAGGGTTAAAGT 	
    248900	    29	 100.0	    32	.............................	GTAAATGGGAATGAGTAGAAGAGCGTCATTGG 	
    248961	    29	 100.0	    32	.............................	CCCCCGCGCACATGCTTAAACGCGCTATCACG 	
    249022	    29	 100.0	    32	.............................	GGCATCTGTTGTGTAATGTTGAGTTTTTTTCA 	
    249083	    29	 100.0	    32	.............................	CAGGTTAAACATGTAAAAAATGACCGTCGCCG 	
    249144	    29	 100.0	    32	.............................	CACATTGCCCGGTCTGAAAAGTATTTGAAAAT 	
    249205	    29	 100.0	    32	.............................	TCCGCACAGTCAAACGCTCCAGACACCAACCC 	
    249266	    29	 100.0	    32	.............................	CCGGAACACCACCAGTAACAGCTACTGTAGGC 	
    249327	    29	 100.0	    32	.............................	TGACCCTGTTGATTTTGTTCCAGGTAATACGT 	
    249388	    29	 100.0	    32	.............................	TTAACCTCGTCGTTCTGGTTTCCGCCCAGGAT 	
    249449	    29	 100.0	    32	.............................	GAACCTGAATTCGAAGGGTGGGTCATCCTTCC 	
    249510	    29	 100.0	    32	.............................	GGACCCCGAGCGACCCGGTCACCCTCCGACCT 	
    249571	    29	 100.0	    32	.............................	CCGTCGAACGGCGGTTATATCCATCTTGAGTC 	
    249632	    29	 100.0	    32	.............................	ACCGATCCCACAATTGCGGCGGTTGAGATTGA 	
    249693	    29	 100.0	    32	.............................	TGCCGGACGTTGTACCTGTGAGTTAATTCTTC 	
    249754	    29	 100.0	    32	.............................	CGATAACCGGGCGTTTCGACTGAACTCACCTC 	
    249815	    29	 100.0	    32	.............................	TTAATACCAGGGGGCAGGTTCAGCAGGTCCCC 	
    249876	    29	 100.0	    32	.............................	CCGCTTTAACCCGCTCCGGCAGATCCGGGTGA 	
    249937	    29	 100.0	    32	.............................	CCCTCCGCTTTCAGGGTGTGGCTGATATCACC 	
    249998	    29	 100.0	    32	.............................	CGCGCTGCGAATTTGTTGGTCGATTTCGATCT 	
    250059	    29	  96.6	    32	.............A...............	TGGGTAGAGGTTAACTGGTTATTGGTCATTGA 	
    250120	    29	 100.0	    32	.............................	ATCGCGGAGGCCTTCGGTGTGTCTCTTTCCTG 	
    250181	    29	 100.0	    32	.............................	CCGTTGTCAATATCTCCCGGCGTCCGCGCCAG 	
    250242	    29	 100.0	    32	.............................	CACGTCCGGAAACCACGGGTTATCCGTGTAAT 	
    250303	    29	 100.0	    32	.............................	CAGAGGTCCTTATCTTTTCAACGTCAAAGTCG 	
    250364	    29	 100.0	    32	.............................	GCAATCCCAGAGCGCGAATATCTTGGGCTCTC 	
    250425	    29	 100.0	    32	.............................	GGGATGAGCGTTTTCCGGTGGATTCTGATGTG 	
    250486	    29	 100.0	    32	.............................	GTGATCGTCATGGATATCACTGCCGTTCCGTC 	
    250547	    29	 100.0	    32	.............................	CAGACAGACAGCAGGCAGCAAACAGGGAAGAC 	
    250608	    29	 100.0	    29	.............................	GGGTTCACTTGGGTGAAACTGAACTAACT    	
    250666	    29	  75.9	     0	...........ATTC...A......G..C	|                                	
==========	======	======	======	=============================	=================================	==================
        42	    29	  99.3	    32	GTGTTCCCCGCGCCAGCGGGGATAAACCG	                                 	       

# Left flank :   GTGCTGTCTGCTGGCGAAATTGAACCGCCTCAACCACCGCCGGATATGCTGCCGCCGGCGATACCCGAGCCCGAGTCGATGGGAGATAAAGGGCATCGAGGGCATGGCTGATGAGTATGCTTATGGTGGTGACGGAAAATGTTCCACCTCGCCTGCGAGGACGGCTCGCAATCTGGCTGCTTGAGATCCGCGCTGGGGTATATGTTGGTGATACCTCAAAACGGATCCGGGAAATGATCTGGCAGCAGGTGATACAGCTAAGTGACGGTGGAAATGTCGTGATGGCCTGGGCGACAAACAGCGAATCAGGTTTTGAGTTTCAAACCTGGGGAGAAAACCGCCGTATACCGGTAGATTTAGATGGCCTACGACTGGTTTCATTCCTTCCCCTTGAAAATCAATGAGTTGGATGTTCTTTAATAATGTGAGATTGTTGTGATAAAGTTGGTAAATTGTTGTGTGCTTAAAAAGCTATTATAAAACAGTAATATATCTTTAGT
# Right flank :  CGTCCACTAACGTTATCGATCCTGAGAGTGGGCACGAAAGCTTGCGGAGAATAAATATCGCTACCTGCCGCTCTAGCGATATCACTGTTTTTTTACCGTCTCCTGGATCGCGCTAAAATCCGGCTCCGGGCAATCCCGACCAAAATTTTCGGCCCATGGGAACGGGGCGCCGTACTTAACATAGCGCTGATACAGGCGTTTGGTTAATTGAGCATCCCGCCCCCATACCCATCCTGTTGCATTACACAGCACGGCAGCATAGGCCTGTGATTTATATGGCAACAGGTCGGCCGCTTTTTCCGCCAGCGTCACCGCCTGCCAGCGATAGTGTAAGAAATGACTGTCCTGTTTTAGCAGGGATCGCTGAACGCGTTGCCGTTCGCCATCACTTATCCACGATGTCACGGCCGAATTATCTTCCGGTCCCTGGTTGTAATAGGGCCATGAATACCCGCCTCCATACAGCGCAAAATCGGGCGCCATCTCATAGCCTGTCAATT

# Questionable array : NO	 Score: 6.22
# 	Score Detail : 1:0, 2:3, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GTGTTCCCCGCGCCAGCGGGGATAAACCG
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     F [5,4] Score: 0.37/0.37
# 	Reference repeat match prediction:         F [matched GTGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5
# 	Secondary Structural analysis prediction:  F [-13.50,-12.00] Score: 0.37/0.37
# 	Array degeneracy analysis prediction:      F [0-8] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: F [76.7-51.7]%AT Score: 0.27/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         F [5.92,0   Confidence: HIGH] 

# Array family : I-E [Matched known repeat from this family],   
//