Array 1 67980-70692 **** Predicted by CRISPRDetect 2.4 *** >NZ_WNZZ01000027.1 Paenibacillus macerans strain 3CT49 NODE_27_length_85913_cov_48.2554, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ======================================= ================== 67980 32 100.0 36 ................................ AAAGACGTTCAAGCCGATCATACGTACCGCTTTAAG 68048 32 100.0 36 ................................ CGTTTCGGACTCTTTTATGCGTGCGCCCGCGACCGA 68116 32 100.0 37 ................................ TTACTTAGCCTCGACGAGATGGATTTTGTGCTATTTG 68185 32 100.0 33 ................................ TCCATCTCTGTAACCTAACTTGTTTAGATGTAG 68250 32 100.0 34 ................................ TGTGCGCGGCTTAACGAGATGGGCTTTAGTGCCT 68316 32 100.0 36 ................................ CGTTCGTCATCGTCCGGGTTACCGCCGCCGGAACCC 68384 32 100.0 35 ................................ ACACTTGATACATTCCCGTTGCGAAAATGGGGAGA 68451 32 100.0 36 ................................ GGCAAGTTGTTTCCAAGTGACAACCGGAATAAAATC 68519 32 100.0 34 ................................ CAACTTAGAATATCTCGATTGGATAATTTAAGTG 68585 32 100.0 35 ................................ TTCTAAGAGTTGAACCAAAAGATGTTGAGCCTTTG 68652 32 100.0 35 ................................ GATGGTGGTATATCCCTTACCGCCGTAATACTCGT 68719 32 100.0 35 ................................ GTCTAGGTTGGCTTTGTTTTCGCTTGTTGGCCTTT 68786 32 100.0 34 ................................ GTCTTTCGCTTTGCTTTTGTTACGTGTAGGTAAA 68852 32 100.0 34 ................................ CGATAAACATTGCGGCCGAGGTAGACCTTGCGCC 68918 32 100.0 34 ................................ CTTGATTGCTTCGAAAATGCCGTCAAGATCGGTG 68984 32 100.0 35 ................................ CCATGAACTCCCGCGATAAGTAAAAATAATCAAGT 69051 32 100.0 34 ................................ AGAGACTTGATGAACTAAAAAGCCTCTCATTCCA 69117 32 100.0 33 ................................ TCTGATCGATGATAATGGTAATCTATGCCCTTT 69182 32 100.0 35 ................................ AGGTCAGCCGTGGCCGCTTCAATAGCATCCATGCA 69249 32 100.0 35 ................................ TGCGCTATCCGCTAATGTTGCAAATGATTGATATC 69316 32 100.0 35 ................................ GCCAATATCCCCGTCTTTTGCTCTATGGTCGCCGG 69383 32 100.0 35 ................................ GCCAATATCCCCGTCTTTTGCTCTATGGTCGCCGG 69450 32 100.0 35 ................................ GCGGATCTTCCAAGCGGGCGCAGCCTGGCCTATAT 69517 32 100.0 33 ................................ TCTGCGTAATCTTGGTAAACGTGTGGGATGAAC 69582 32 100.0 36 ................................ ATCGTCAGTATTGCCGCAGAGATAGCAACCTGGCTG 69650 32 100.0 36 ................................ CAGCGTACGTCAGGCCAACAAGATCATAGCTTTCCT 69718 32 100.0 37 ................................ GTGGATGGCGACAGCATCATTATCCGTAAATACCAGC 69787 32 100.0 34 ................................ GATCAAAAGACAGCGCGATGGCGATAGAGTTTGC 69853 32 100.0 35 ................................ CATCATTAGCTGGCTCAGGCAAATTTACTTCGGGG 69920 32 100.0 33 ................................ CGGCGTGAGCCATGCGGCTGTCCCGGTTTCCGC 69985 32 100.0 38 ................................ GCGGATCGCCAGGGACACGCTGACTGCCCGCTCTGACG 70055 32 100.0 36 ................................ ACAGCTCAAGGCTTGGCTTGCGGAACGCGGGCTTGA 70123 32 100.0 33 ................................ CTCAAACTTAGCGTCAAGTTCTGCGGACATGTC 70188 32 100.0 35 ................................ CAAGACAATGCGGCTGATTGTAAACCTCGTAAATC 70255 32 100.0 34 ................................ CAGCCCGCTATATGGATTACGGTTTGGCAAAGGC 70321 32 100.0 35 ................................ TGTGAGGGTGACAATGAGGTCGTAAAGCGAACCAT 70388 32 100.0 35 ................................ CTTAGATATACGCAGCGTATTTTCAAGCGATAAAC 70455 32 100.0 36 ................................ TTCCGCAAATTCGCCCGTTTTGTTTCTGAAATCGTC 70523 32 100.0 39 ................................ TCTTCCAGCCGGTCGATCCGCTTATGCGCCTGCTTGGCC 70594 32 100.0 35 ................................ ATATGCTGCACAATGAGCTCGTCCAATTGTTGAGA 70661 32 81.2 0 ..........G.............GAG...TT | ========== ====== ====== ====== ================================ ======================================= ================== 41 32 99.5 35 GTCGCTCCCTATGTGGGAGCGTGGATTGAAAG # Left flank : CGCCAAATGATCGAGGAATTAATGGATTTATATAGCGGCAAACCGGCCTTTTTGGACGAGTTGAGCCAAATCCATGACGGGTTAAATTAATGAGATCCTCCCTTGGGGAGTTTTTTGTTCAATTTAGAAGTCGTCGCCGCTTGGCTATACGGCCAAATTGACCGATTATTCATGGATGGATATTAGGAAATTTGTGGGGGAAAAAGGTTTTTGGGCGATTGGGATCGAAATAGGTGCGTAAGGCTATGTACCTTTAACGAGAAAGATACGACGATGTAGCCTTGAAGTAATGAAGAGTAATCAATTGGTTGGTAAAAGCGGGAAAGAACAGCGGTGCGAACCCCAAGCTCACATAAAATCCCCGGGACATTCGCACCTCTTGTCTGGCGTGGGATTGCGGGATATTGCGGCTTTGTTTAACTTGTTTTTAAACCATAAAAAGGGGATTCGCACTAAAGCGTTTCCAAACCTTTGCTGGATGCGGGGGTTAGGTGGACGGA # Right flank : TATCGGATTTGTATAGCGGCAAACCGGGCTTTTTGGACGAGTTGAGTCAATTTCATGACCGGTCTAATTAAAGAACTCCTCCCTCGTAGGGGAGTTTATTGCTCAACTAGCTTGGCTACAAAGTCAGTAGACCGATTCATTAGAGAGATATTTGGGAAACTGTGAGGAAAAAGTTTTGGCCGATTGGAATCGAAATAAGTGCGTAAGGCTTTGTGACTTTAACGAGAAATATACGACGATGTAGCCTTCAAGTACTAAGAGGAAGATAATCAATTGGCTGTAAAAAACGGGGAAATAGCAGCGGTGCGAACCCCAAGCTCACATAAAATCCCCGGGACATTCGCACCTCTTGTCTGGCGTGGGATTCCGGGATTTTGCGGCTAAATTTTCCCTATTTTTAAACCATAAAAAAGGGGATTCGCACTAAAGCGTTTCCAAACCTATGCTGGGTGTGGGATTAAGATGAACGCAGTCGCTCCCTATGCGGGAGCGTGGATTGA # Questionable array : NO Score: 9.23 # Score Detail : 1:0, 2:3, 3:3, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCTCCCTATGTGGGAGCGTGGATTGAAAG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: R [6,8] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-5.70,-5.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-6] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [45.0-53.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0.37 Confidence: HIGH] # Array family : NA // Array 2 71163-74935 **** Predicted by CRISPRDetect 2.4 *** >NZ_WNZZ01000027.1 Paenibacillus macerans strain 3CT49 NODE_27_length_85913_cov_48.2554, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ====================================== ================== 71163 32 100.0 35 ................................ CTGTATCCTTCGCGGATCGGGAGGCCCTTTTTTGT 71230 32 100.0 34 ................................ AAGTACGCAATGTCGCCGAATCCAGACTCATTTT 71296 32 100.0 33 ................................ ACTTGTTCCAACCCCAAAATTAAATGCGCTTAA 71361 32 100.0 34 ................................ TGTTGAATACGTAAAAAGGCAAGAAAATACTACG 71427 32 100.0 33 ................................ AAGCGTTTTAAACCAGGACTCATACATAAAATT 71492 32 100.0 37 ................................ GTGAATATTCTATGCAAAAACTACTTGCAACCAAAAA 71561 32 100.0 33 ................................ CCGTCCTCTGACGAAGATTTCGAATTTATCTCG 71626 32 100.0 37 ................................ CGTCGTGGCACGACGTAAAGGACGTATCGGCGTTTAT 71695 32 100.0 35 ................................ AATAATGCTGCCATTGACGAACGTCCACTCGTGCT 71762 32 100.0 36 ................................ GGGGTTGGCGCCCCAAGCCCCCTCCCCTTTGCCCGG 71830 32 100.0 35 ................................ CGAAGTCTATGGACGTGGGGAAGGCGTTTGATAAG 71897 32 100.0 35 ................................ ACTCGGGTATCTGTAGACTGATTTCCACCTACATC 71964 32 100.0 35 ................................ GAAAAAATGTTAGTTAGCAACTTCACAAGCGCCCA 72031 32 100.0 35 ................................ TTTGCCCGTGGGGGACCTTAATGACCTTACAACCC 72098 32 100.0 34 ................................ TTCCGAATCTGCTGGAAGGCAAGGACATAGGCTT 72164 32 100.0 35 ................................ ATATGTTGTATCGCAAAGAACAAAACTTGATTGAT 72231 32 100.0 36 ................................ GAAAATAAACGAAAATCACAGTGCGTAAGCCCTCAC 72299 32 100.0 38 ................................ CGGTGTTGCTGTAACACAATTCACAATAGCAGTAGACC 72369 32 100.0 36 ................................ ATAGTTTTTAATGCGATAAAGCGTAAAGCGTGGATA 72437 32 100.0 37 ................................ GCCGCCGTCCCATTATGTCGAGTTAACCGCGTATCCG 72506 32 100.0 34 ................................ CACTTATCCAGGCGAAGAAAGAGCGGGTGAACGG 72572 32 100.0 34 ................................ TGACCGATTGTATGTTCTAACCGTCTTAATACTG 72638 32 100.0 37 ................................ GCCATTTTCAGCTTCCGTACCGTCAAAATTGAAATAG 72707 32 100.0 36 ................................ TCTTTTGCTTTGTCGATATATTCGACCTTGAACCAA 72775 32 100.0 36 ................................ GTATGTTTTTGAGCGGCACGGGACCAGCGGTTTACA 72843 32 100.0 34 ................................ GCCACGGGAGGGCAAAAGTCCTAGTAGAAAGGAG 72909 32 100.0 35 ................................ GTATTTGCAAGGCGCTGCAACAAGGCAGTTAAACA 72976 32 100.0 34 ................................ AGCCTTTTAGCAATAAACAAAAAAAGCTGTTAAT 73042 32 100.0 34 ................................ ATATGCTCACCACTTTAAATGAATTATATAAATT 73108 32 100.0 35 ................................ TTTGCCTCCTCTAACGCCTCGATATAAGGTTTGTG 73175 32 100.0 34 ................................ GGGACAATGCTGAATTTTCTGGTATTATCTCGAT 73241 32 100.0 33 ................................ GTGATCGTGATGATAAAACCGTTGAGAAGATCG 73306 32 100.0 34 ................................ GTGTTTCAGGGCGTATTCGCGTTTTATGATTGCG 73372 32 100.0 35 ................................ CGAACGATTCGGCAAGTTGTGATGTCGTTAAAACC 73439 32 100.0 32 ................................ AATTATTTACTCTGAGAGAAGTTAGAGGGCGC 73503 32 100.0 33 ................................ TTCGGCGTTTGTGCAAGAATATTGAACTTGATT 73568 32 100.0 36 ................................ ATCTGATTTCTTTATCGGGAGCACCTATCGAGACAA 73636 32 100.0 37 ................................ CGCAGCGCTCACAACGCCCTCCAGACCGTTCTAGTGC 73705 32 100.0 37 ................................ CGCAGCGCTCACAACGCCCTCCAGACCGTTCTAGTGC 73774 32 100.0 33 ................................ TTAAGAAAGTCTTAGAGGAATCGTTGGTGCACA 73839 32 100.0 33 ................................ GGTTTGTCCGCCATTTGCAAACGCTTCCTTATA 73904 32 100.0 33 ................................ TACCATGGTATCACCCCTCTATAAAATCAAATA 73969 32 100.0 38 ................................ TCGACGAGATCGAAGAGAAAGCGCCGGAAGCGCCGCAG 74039 32 100.0 35 ................................ ATCGAAAATAACCACGCTGCCATGCACATCCGCGA 74106 32 100.0 37 ................................ ATTGGCATGTTTTAGCCCTCCTTAACCTATAGCAACG 74175 32 100.0 34 ................................ GTCGATATTGGCCGTGATGTTTGTAGCTTTACCG 74241 32 100.0 36 ................................ AGTCGGTGACACTGAGGAAAGCAGAAAACGTGGTTG 74309 32 96.9 33 ....T........................... TGACGGCCGAGGTATCCATAACGCTACAGGAGT 74374 32 100.0 34 ................................ TGATTTGGCCAGCAAGAAAAAGTATTCATGAGCC 74440 32 100.0 35 ................................ TTCTGAAGATCATTACCCTCATGTGATTGGAGTGT 74507 32 100.0 34 ................................ CAAGGATCCAAACGGCAACGGCCAGAAGGATGAG 74573 32 96.9 35 ...A............................ TTGCCGGGATCATTGTTTTTTGACCTATTACACCA 74640 32 100.0 33 ................................ GTTAATAATCTTGATGTTGCGTTGCTTGAGATC 74705 32 100.0 35 ................................ GAGTAGGGTTTCCGCACATTACAGCTTATTGAATT 74772 32 100.0 33 ................................ ATCCATACTGAATGCACCGAGAAAGTCTGTATA 74837 32 96.9 35 .............T.................. GCCGACGGTCGCATATGTATGCCCATCCCCAAGCG 74904 32 93.8 0 .............T..........C....... | ========== ====== ====== ====== ================================ ====================================== ================== 57 32 99.7 35 GTCGCTCCCTATGCGGGAGCGTGGATTGAAAG # Left flank : CGCTCCCTGTGTGGGAGCGTGGGAGGAATTATCGGATTTGTATAGCGGCAAACCGGGCTTTTTGGACGAGTTGAGTCAATTTCATGACCGGTCTAATTAAAGAACTCCTCCCTCGTAGGGGAGTTTATTGCTCAACTAGCTTGGCTACAAAGTCAGTAGACCGATTCATTAGAGAGATATTTGGGAAACTGTGAGGAAAAAGTTTTGGCCGATTGGAATCGAAATAAGTGCGTAAGGCTTTGTGACTTTAACGAGAAATATACGACGATGTAGCCTTCAAGTACTAAGAGGAAGATAATCAATTGGCTGTAAAAAACGGGGAAATAGCAGCGGTGCGAACCCCAAGCTCACATAAAATCCCCGGGACATTCGCACCTCTTGTCTGGCGTGGGATTCCGGGATTTTGCGGCTAAATTTTCCCTATTTTTAAACCATAAAAAAGGGGATTCGCACTAAAGCGTTTCCAAACCTATGCTGGGTGTGGGATTAAGATGAACGCA # Right flank : GATGTAAAATCAATACCAAGTTGCCCCTTAAGATAACGCCACTCTCAAGCCTCAGCGTTCCTCTCTGCACGAGAGGGTGGAATGAAAGAAGGTCTGATTCTTTGCGATTACCAGGATCAATAGCCACTTCCCACATAGGAGTATCTTAATGAAAATTGCCTTTGGTTAAAGGCTTTTTTTGTACACTCAAGGAATGTGGAAATGTTCGCGTGTTTAATGTGGAGTGATTTTAGAGTGAAGCCCCCTCCTTATCAATTGCCTAGATGATTACTCCTTCGCTTAGAGAGAGGAGATAGATAAAGTTAAGGGAGGTTATGGAATTAACGGATTTATAAACGGCAAACCGGCCTTTTAGATGAATTGAGCCCAATCCACGATTAGACAAATTATTGAGCTCCTCCCTCGCGGGGGGAGTTTTTTGCTTAACTTGGAAATCACTGTAGAAATCCGCCCACAAAGGCAATCACAACCCTCAGATTCGTTTCTCACTCTTGCTTTAA # Questionable array : NO Score: 9.25 # Score Detail : 1:0, 2:3, 3:3, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCTCCCTATGCGGGAGCGTGGATTGAAAG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: R [6,7] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCGCTCCCTTCACGGGAGCGTGGATTGAAAT with 91% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-7.50,-5.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-5] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [51.7-55.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [9.78,0.37 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 3 83496-85393 **** Predicted by CRISPRDetect 2.4 *** >NZ_WNZZ01000027.1 Paenibacillus macerans strain 3CT49 NODE_27_length_85913_cov_48.2554, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ==================================== ================== 83496 32 100.0 34 ................................ TCCACTCACGGCAAAATTTACGAGGCGTCCGCCT 83562 32 100.0 35 ................................ ACCGCAGCTTACGTAACACGTTTTGAGGAAATGGA 83629 32 100.0 35 ................................ CTAGTCAACTTGTTTATAGACCCGGTATACTCGGT 83696 32 100.0 35 ................................ TTTGGTTTTATCATAAGCCGCTTTATTTAGGCAGC 83763 32 100.0 35 ................................ GTTTGCCTCTGGATCGCGTTGGCCCCAGATGGTAC 83830 32 100.0 34 ................................ AGGGCATTTGGATCAACGAGGTCGGCGAGCTGAC 83896 32 100.0 36 ................................ TCCGGGGATACGCCACCGCCGTACTCATATATCCGT 83964 32 100.0 35 ................................ ACTTACCTTGTTGCCGACCGGATTAATTTCGCACA 84031 32 100.0 34 ................................ CATGGCTTGGACAGTCACAATCCAATCCCGACGC 84097 32 100.0 34 ................................ TAAAAGAAAACGGACAAGGGGAAATAGACGCATG 84163 32 100.0 34 ................................ CAATTACGCTCCGGTCGCCGACAAACCCGCGCCG 84229 32 100.0 34 ................................ CGACCGAATATGCACAGCGAAGCGGTGGCCGCAG 84295 32 100.0 36 ................................ TCTGAAAAGTACGATCTAATCATCTCGGAATTGCGC 84363 32 100.0 34 ................................ ACCGAAGCTTTACACGAAGCAATGCGAAAGTTAG 84429 32 100.0 33 ................................ TCGAGCCAAGGCATTGCCCGATTCGGCCATATG 84494 32 100.0 33 ................................ AATTGAATTAAGCAACTCATTAGTAGGAGTGCC 84559 32 100.0 34 ................................ TAAGCGGTCTTTATCCTTTTGCCAGTCTCTAACC 84625 32 100.0 34 ................................ CAGAAGACATATACACAGCAATGAAAATATTCAA 84691 32 100.0 34 ................................ CTTCCCGGTAAACACTTCATAGTCTGCCTTTCGG 84757 32 100.0 34 ................................ GGCCAACGCCGGAACCGGCACGAATGATAAAACA 84823 32 100.0 33 ................................ AGAGATAAAGCCTCCTACTTTGGAAAAGAACCC 84888 32 100.0 35 ................................ ACATGCTTGAGCCGCTTCCCGATTTCAAACACCGA 84955 32 100.0 36 ................................ GGCATGCCAATGGCCAATTTCGTCAAGCTGCCGGTA 85023 32 100.0 36 ................................ AAAGGTCGTCAGGCTATCGCTGTACCAGTTCTTGCC 85091 32 100.0 35 ................................ GTCCTTAGCGTGGCCCAGTTGCTTTCGGATGTCAT 85158 32 100.0 36 ................................ GAAAGTGTTCGGGTTTATTGCTGACGATGTAGTCCC 85226 32 96.9 36 ............A................... TTCGATCAATTCTTTAAAACTCCAAAACCGTATTGT 85294 32 93.8 36 ..........C.A................... TTTATCCGGAGCACAAGAAATTTCAAACGATAATTC 85362 32 93.8 0 ............A.........A......... | ========== ====== ====== ====== ================================ ==================================== ================== 29 32 99.5 35 GTCGCTCCCTATGCGGGAGCGTGGATTGAAAG # Left flank : CGTAAAGCATTTAACTGGCCGAAGCCAAAGAATTCCGAAAAAATAAACGTAGAACAGACGGCAGCAACGGAAATTGAGGACATAAAGAAGCAGTACGATTTGCAGAATTATCGGGTGTGCGTTAACCTGGACAGCAAGAGCGGGGAAAAAGAAGAAATCTCGCTGCTTTCTCTAACGTTTCAACTAAATCAGCTTTTGATGCTGATTAATAACCCGATGTTATTCCCACATAAAGCCTATGTAGATATGTTTAACGAGCGGTATACGAAGGAGTAGCCTTGGAGCATGAACCGGGAAGTAATCGTTCTCTAGCAAAACGGAATATAGTGGCGGTGCGAACCCCAAGCTCACATAAAAATCCCGGGACATTCGCACCTCTCGCCCAGCGCGGGATTTCGGGATTTTACGTCAATACTTACCCCATTTATTAACCATAAAAAAGGGGATTCGCACTAAAGCGTTTTCAAACCCTTGCTGGATGCGGGGTTGAAATGATCGCG # Right flank : GAATTTTACGCTGCTCATTTCTTCCATTTTGTGTCGCTCCCTACGAGGGGCTAGAATGGGATTTACTTTCCCAAGAAAGAAAAAAGACTCGCTAACTGGGTACGTAAGAACGAGCCCATAGGTTAATTTTGTACACATGAAGGAGAACCAGCTCACCTACTGTCCAAAAATTCTGAAGAGAATTTCTGGACAGTGAGCCCTTTTACATAAAAATAAGGAATTGCATTTTCGTATAAATTTAAAAAGAAGAACTACGAGTCTGCCTAAAAATCGATGCTTGACTGACGGGTTAGCCTCGAATGATCGATCCATCCGAAATATTTTCTACGCTAACGGTTGTCAGCGCGCCTATTCGGCCGAAAATCGGGGGGTTTCTTTTCTAAGGGTTGTATATGCACTAGCGTTGCAAGAACACTAACATCAATTTTCAGCAAAACCCACATTTGGATTATTGAAACTATAAATGGATTTTTTTACAGTCATTTTTTAAGCTTAAGACC # Questionable array : NO Score: 9.23 # Score Detail : 1:0, 2:3, 3:3, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCTCCCTATGCGGGAGCGTGGATTGAAAG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: R [6,7] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCGCTCCCTTCACGGGAGCGTGGATTGAAAT with 91% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-7.50,-5.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-5] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [48.3-53.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [9.78,0.37 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 1 197368-198811 **** Predicted by CRISPRDetect 2.4 *** >NZ_WNZZ01000004.1 Paenibacillus macerans strain 3CT49 NODE_4_length_394622_cov_50.2121, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ======================================= ================== 197368 32 100.0 37 ................................ AAGCATTTGCAAAACCAACCTGCCGGCAGGTGTTGAT 197437 32 100.0 39 ................................ CGCGCGATTCTCCTATATCGCCTTGAAGCCTGCCGCAAC 197508 32 100.0 37 ................................ TGTCCATTTTTCGTGTTTTAGCATCTCTTAGCACCTC 197577 32 100.0 35 ................................ AGCAACTTATGAATGCTTAAACTGCGGCGGCATTG 197644 32 100.0 34 ................................ CAAAAAGCGGAATTGATAAAGGTGTGGCGTTGGG 197710 32 100.0 34 ................................ CCCTAAAGCAGCGTCTATTATTTTGATCATTCGT 197776 32 100.0 35 ................................ GTTAACAAAATGACGAGCTGCCGGCGAGATCCGGA 197843 32 100.0 35 ................................ TCCGATTACCCATCGATCGATATTAGCTAGCATGA 197910 32 100.0 33 ................................ CTGTATCCTTCGCGGATCGGGAGGCCCTTTTTT 197975 32 100.0 34 ................................ TTGCCGAATACCGTAAGCGCGCGGCCGGCAAGTC 198041 32 100.0 35 ................................ GCAAAGCTGCGCGGTGACAATTCCGTGGTTTGACG 198108 32 100.0 35 ................................ GCGAGTGTTATGCGGCGCTTGATAAGCGGACGTTT 198175 32 100.0 35 ................................ GATATGCCGTGCATGCTGCTTTGGATGCTGCTTTC 198242 32 100.0 33 ................................ TCAGCACCGGCAGCAAAGATATCAAACATCTTA 198307 32 100.0 37 ................................ CAACCCCTGACATAAGTCCACTAGCTGTGATATCAAT 198376 32 100.0 35 ................................ TTAAGGGGCGGCAACAGGGTTTTACATCTCTTATC 198443 32 100.0 35 ................................ TAATGCGGCGTCAGATTACAGCGTTCCGGAAGGTC 198510 32 100.0 39 ................................ TCCAAGGTCTTTGGCGAATTGCTTAACCTGTGTTTGAGC 198581 32 100.0 36 ................................ TCTCTGCTGAAGCATTCACCAAGCACGGAATTAACC 198649 32 100.0 34 ................................ ATCGATCATTACGGATACAACGTCCAAATGGCTG 198715 32 96.9 32 ..................A............. CCCAATGTTCGATGCGATTAACGCCATGCCCG 198779 32 75.0 0 ...A.....TT...A.......A.....C.GG | T [198785] ========== ====== ====== ====== ================================ ======================================= ================== 22 32 98.7 35 GTCGCACTCCATGTGAGTGCGTGGATTGAAAT # Left flank : GATGAGTACCCGCCATTTTTATGGCAGTAGGTGAGTCCGGATGCTTGTACTCATTACTTATGATGTTCAAACAACAGGCGTGGGAGGGGCCGCGCGGCTCCGGAAAGTGGCTAAGGCATGTCAGAACTACGTGCAGCGGGTGCAGAATTCCGTGTTTGAGTGCATTGTGAATGCAGCCCAGTTCACTGCTCTGAAATTGGAGTTAACCCAGTTAATTGATGAAGAAAAAGATAGCTTGCGATTTTATCGGTTGGGCAATAACTACAAAACCAAAGTAGAGCATATTGGGGCCAAGCCATCGATAGATTTAGAGGAGCGGTTATCTTCTAGCGGTGCGAACCCCAAGCGCACATAAAATCCCTGGGAGGTTCGCACCCCGCGTCATTAAAGGGTTTGTAGAGATTTTGGTTAAAATTAATGGAAAAATTTCGTGCTCGCAAAATGGGTTCGCACTTTTGGGCTTACGAGGCCTTGTGCCACAAGGATTCGCATGGCCCGCT # Right flank : GGAAATAATGGACTACACTTTCATACTATTGACTAACCGTTCATAATAAATGTTCTGATTCTGAAAGTCTCGCAACTTTTTGGGGTTCATAGCAAAGCGCTTTAGGTAGAGATGATAATCATAGCGTTAAACGTCAAGATGGCTTTCCACGTAATTTGTACGACTTCCCACACGTCGCCGAAGACGACGACCCCGGTCAGCAGAGCCAGCACCGCGCCGCTGTAGGCAGATCGGCCGATGTTCAGCCCTTTGGGCTGCCAAATCACGAAGTCAACGTCATGATAAAAATAACCTATGTCGCAACGATGTCAAAACTCATAGTTCCCCTCCATTATTACAACCGGAGAAGTGTATAGCTAAGCGAGTTGCTTGTTGGGATTGCTACTTAATTGTAATAAGGCTTTTTACCCGTATATTGGTGAATTATGACAAATCTTGCGGTAAAATAGAACTAGGTTGTATATGATCATGCGCGAGGAGATGTGGTTGTGTATATTGCC # Questionable array : NO Score: 9.20 # Score Detail : 1:0, 2:3, 3:3, 4:0.94, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCACTCCATGTGAGTGCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: R [7,9] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCGCACTCTACATGAGTGCGTGGATTGAAAT with 91% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.10,-2.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-10] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [43.3-70.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [9.78,0.64 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 2 207552-208257 **** Predicted by CRISPRDetect 2.4 *** >NZ_WNZZ01000004.1 Paenibacillus macerans strain 3CT49 NODE_4_length_394622_cov_50.2121, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ===================================== ================== 207552 32 100.0 36 ................................ CCTACAAGCCGCAGCCCCGACAACAGCTTTACCATC 207620 32 100.0 33 ................................ GGGAACGGGAAAAGTACGACCGCTGTCATAAAG 207685 32 100.0 36 ................................ TTGTTTTGGTGATCTCGGGGATACGCCACCTTCGTT 207753 32 100.0 36 ................................ CATTAATTAAGCGAGCTGTTCTGGAAACCCGTGATG 207821 32 100.0 35 ................................ GGTCGATCATCGCCTTTAAGTCGCCGGTCTGCATC 207888 32 100.0 37 ................................ CTTGAAGCGGTCTTCAATCATGGTTTGCCGATGGATC 207957 32 100.0 36 ................................ TTGACAGCCTAGAACTTACACATGCGGAACGAAAGG 208025 32 100.0 35 ................................ CAGAAAGGGAAGGCCAAAGCCGCAGATGTGGCCAT 208092 32 100.0 33 ................................ TTGGGGGCCATATTGTATGTACCTGGATCTGCC 208157 32 96.9 37 ..............A................. CAGAAAAAGCTTCATGTGCTCGCGTCAGTATCCAGTG 208226 32 87.5 0 ....T......T..A................G | ========== ====== ====== ====== ================================ ===================================== ================== 11 32 98.6 36 GTCGCACTCTACGTGAGTGCGTGGATTGAAAT # Left flank : ATGAGTATCCGCCATTTTTATGGAAGTAGGTGAGTTCGGATGCTTGTGCTCATTACATATGATGTTCAAACGTCAGGGGCGGGAGGTGCTGCAAGGCTGCGTAAAGTGTCCAAGGCATGTCAGAACTACGGGCAGCGGGTGCAGAATTCCGTGTTTGAGTGCATTGTGGATGCAGCCCAGTTCACTGCTCTGAAATTGGAGTTAACCCAGTTAATTGATGAAGAAAAAGATAGCTTGCGATTTTATCGGTTGGGCAATAACTACAAAACCAAAGTAGAGCATATTGGGGCCAAACCATCGATAGATTTAGAGGAGCCGCTTATCTTCTAGCGGTGCGAACCCCAAGCGCACATAAAATCCCTGGGAGGTTCGCACCCCGCGTCATTAAAGGGTTTGTTAGGACTTGGGTTGAAATAAACGGTAAAATTTCGCACTCACAAAGTAGGTTCGCACTTCTGAGTATGTGAGGCCTTGTGGCTCAAGGCTTCACAAGGCCCGCT # Right flank : GTTATGCGACGCTTACGGCGGAATACCCGGACATAGTCGCACCAGCAAAATGAGCTTTTTCTCGAATAAGCGGTCAAACGATTGAGAAATATTCAGTCCTTAAATAGCCGGGGATAGAGAGGAAAAGTACGGGCGGGGGAATGACGGAGGAAACGGAGGTCCTATACATCGTTATCAGCAAACAAGAGGTGTCCACGCTTAATAAGATTGTCAAATCCATCGACAAATCCGCCTTTATCACCATTCACGACGTGCGGGATGTGTTTGGCGAGGGGTTTTTGGATATTTCGAAGTGAGTGACAAAAAACCGTAACCTTATTTGGTTGTGGTTTTTTGTTTTTCTCAATAAGTAAGTTGGCAAGACGCTGATAGCACTGTGTGCTCAAGTTCGACCTGGTATAATTTGTTTATGGAGCAACAAGGAGATGGTTACTATTAAGAGTTTTGTGAAAATCAATATAATGAGTTTTGGATACGCGGTAATGTTATCTTTCCCTATA # Questionable array : NO Score: 9.19 # Score Detail : 1:0, 2:3, 3:3, 4:0.93, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCACTCTACGTGAGTGCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: R [7,9] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCGCACTCTACATGAGTGCGTGGATTGAAAT with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-7.60,-2.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-5] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [45.0-50.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [9.78,0.37 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //