Array 1 8534-8266 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAHAMO010000031.1 Vibrio metschnikovii strain MH3GW Scaffold31, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 8533 28 100.0 32 ............................ GCCCCAATCAACACAAAACCGACAACGCAACC 8473 28 100.0 32 ............................ CATTGCATAACAAAAGGCTTTCCAATCGCCAG 8413 28 100.0 32 ............................ ATCCTGCCCTAAATGTTGAAAAAGCAGATCGG 8353 28 100.0 32 ............................ ACGAATTCGTCACAGGTTAATTGGCTTGAGAT 8293 28 96.4 0 ........................A... | ========== ====== ====== ====== ============================ ================================ ================== 5 28 99.3 32 GTTCACTGCCGCATAGGCAGCTTAGAAA # Left flank : AAGCGCTCGCTGAAGCTATGGGTGTACACAGAAATACGGTGAGTAATTTGATTAATGGTGGAGTGTTAACGGCTCCAGTAGCAATTAAGTTAGCTGCTGCACTAGGAAATACACCAGAATTTTGGCTTAATATTCAACATGCTGTTGACCTTTGGGATACGAGAAATCGTTACCAAGAAGAGGCCAAATTTGTAAAGCCGCTGTTTGTTTCGCTGGAACAAAGTGCACGTACATAACAAAGCGTTAAAGAGGGACAGCCAACGCGTGGCATTTTCATCATGCGTTGGTTTTTGTGGTTACGGTGTTATGCGGAAGCTTGGCAGTAGCGTTGGCTGCCCCTTAACGCGGCGTTAACTGGCAATGAAATTACCCATCTTTTTTCGTTGAATTTTAAGTTATTGATTTATATTAATAATAAATCGAGTGAAAAATAAAAGGTTATTTTGAGAAATTTGATGTAATTACCATTATTAACAATAGGTTACTGCTAAAGTTTCATA # Right flank : ATGGGTAATTTTGGCATTTGGGATCGGCCAGTTAACAAAGCGTTCAAGAGGGATTCGCAACGCGTAGCATTTTCATTATGCGTTGATTTTATTGGTTTTTAGTGTAATGCGGTGAGTTGGTAGTTGCGTTGCTCACCCCTTAACGCGGCGTTAGCTGCTTACAAGTTCGCATGTTCCATTAGCTGTACAAGTTGATTTTTTAGCTATATACTTGTCTCATTAAACGTACATGTGGAGTTTTTATGAGAATTGTATCTTTTACCGAAGCTAGAAATAGCTTGAAGAGCGTTTTGGATGCTGTTGTTAATGACGCAGATACAACCGTGATCACGCGTCGTGATTCTGAAGATGCGGTTGTTATGTCACTGGATTATTACAATAGCTTAATGGAAACGGTTCATTTGCTTCGTTCTCCGGCGAATGCTGAGCACTTACATCGTTCAATTGCTCAGTTTAAAGCGGGTAAGGTGAGCCAAAGAGATTTAATCGATGAGTAGTCG # Questionable array : NO Score: 6.02 # Score Detail : 1:0, 2:3, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGCATAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [6,8] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTTCACTGCCGCATAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.70,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [55.0-76.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.92 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 1 1473-1728 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAHAMO010000015.1 Vibrio metschnikovii strain MH3GW Scaffold15, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ====================================== =================================== ================== 1473 38 100.0 35 ...................................... GTAGAAAGTAAAACTCTTTTCTCTCATATTCTGAG 1546 38 100.0 35 ...................................... ATTAAAGCAAAGTCCCCTAACATGCACTGTTCTAA 1619 38 100.0 34 ...................................... ACATCGGTGTGGCGTAGGTCTCGTCTGCAGACAA 1691 38 97.4 0 ................T..................... | ========== ====== ====== ====== ====================================== =================================== ================== 4 38 99.3 35 GTCCATCTGGACAACGCCCTGACTGAAGGGATTAAGAC # Left flank : TCATCAGTTATGATATCAGCTGTCCTAAGCGTTTACGAAAAATGCACAAATACTGCAGCAAATACGCCTGGCCGTTACAAAAGTCAGTTTATCTCTTTGCTTTATCGCGAACGGAAAGAGAAAAAACCTGCCAACGTTTGCTCAGTATGCTTGATCAACAGCAAGATAGGCTATTATGTCTGCCTTTTACCTTGTTAGAAGGCAGCTTTCATCAGGTACCAGAGAGCCCATTAATCTTGATCCACTCTGACCCGAGATTAGTCGGCTTTGTTTACTAACCACCCGCCATGATCGAATAATCAAGGGCAGGGGATATTGGCCTGAGTTAAGTGGCTTATTTTTTGCTGTTAAATTTAATCTTAATTATCATCGCTAGTTAGCCGCTTGCTCTATTTAAATGGTATGACAATTGCTTATTTTTGCCTTGCGGGCTTTTGTTTAAAACGCTTGTTTAATGATAAACTTGCATTAATAAAAACAATCGGTTATAAATAGCTTCT # Right flank : CAGATATAGGGTGACGGCTGCGTAATCTTTTTTAAATGACCGTAGTTACGGGATGAAAAAACAGTCGGATTTCAAGGTGATTAGGTGTGAAGCAAAATAAAAATGACGCACTCCGTTGAAAGAGGCGTCATTTTTTATGGTTCTGGCCTTATTTAATCTTGCTGAAAATGAATGTTTTCAGGCAGCACATTTAGACCTTTATATGCAATCGGGGTTCTGATGACCTCGCATTTTAATGGCTTGTAGGTATTAACAGTAACGATTTGATAATATTTTGCCAACCGAGTACCAAGAGCATCCGTCAATGCCATATTGGTTTCTTTCAGTAATCGTACCCATAAACTTTTATGGTATTTAACCAACGCTTTTACAATATCGTCATCGTTTTTTTCTTGCAGGCGTGTTTCATGGTTTGCATACAAAAATTGAATTTGCTTATTTTCTTGCAGCAACCAACGATTACGATTGTTCCGTTCGTTTAATGGTGTATTTGATGCTTC # Questionable array : NO Score: 2.82 # Score Detail : 1:0, 2:0, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCCATCTGGACAACGCCCTGACTGAAGGGATTAAGAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [11,7] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-6.10,-3.90] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [75.0-61.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [1.42,0 Confidence: HIGH] # Array family : NA // Array 2 46006-46695 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAHAMO010000015.1 Vibrio metschnikovii strain MH3GW Scaffold15, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 46006 28 100.0 32 ............................ AGTTATCATGGGGAAGATGGCAAGAAGGTAGT 46066 28 100.0 33 ............................ GTCTTGTGCTGCAAGTTGCTATCTCGTGTTGAT 46127 28 100.0 32 ............................ ACTCGCCGAACATATAGACAGATACGGAGTTA 46187 28 100.0 33 ............................ CGCGAAATAAAGTCACAACTTAGAATTAGTTTT 46248 28 100.0 32 ............................ TGAAGAGTTGTGCGCCATTTATACCACAGGAC 46308 28 100.0 32 ............................ TCCACAACGTTTAGGATTTCGTTAATTAAATC 46368 28 100.0 32 ............................ TCCACAACGTTTAGGATTTCGTTAATTAAATC 46428 28 100.0 32 ............................ GCGCGTCAGTGAAAGAGCAGGTCAATTTAACA 46488 28 100.0 32 ............................ CCGTTCCGTTTGTATTCCCTTACGTTCTATAG 46548 28 100.0 32 ............................ AGTACGACAGAGAGCTGGAAATTTTTTCGTTC 46608 28 100.0 32 ............................ GACCATGATTTTTTCGGGATGGATGAAGCAAC 46668 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================= ================== 12 28 100.0 32 GTTCACTGCCGCACAGGCAGCTTAGAAA # Left flank : GGATGTGACTTACGTAAGCTTTGTGCGCAAGCAGGTGAAATCGCCCGAGCGAATAGAGCGGGATATGCAGCAAAAAGCGGCATTATGGGCAGAAAAATCTGCTAAACCGCTGGAGGAATGCTTGGCCGCTTTGCAACAAAGCAAGCCGACAGCATTGTGCCGTTTGCCGTTTATTTACCTACATAGTCAGCAAACTAAGCAGCGATCACCCGACAAAAACAGCAAGTTCCCGTTGTTTATTGAAATGCAGCAACAAAGCGCTTTACAAGATGGTCATTTCGATTGTTATGGACTGAGTACTAAAGGGAATGGGCTTCCTACGTTAGCCACCGTACCGCATTTCTAAAATGAACGAAAAAGGGTATTTTTACCCTTTATTTTTGCTCTTTAAAAATAAGTTTTAAATACAATGGGTTACAATGGACGGTTTTTGATAAGGTAAAAATGCGATTTTTATCCTAACCAACTGTTGTAACTTATTTTTATTGATTTATTCTATA # Right flank : ACGCCGGATTCGATGGAATCAAACTCCCGCCAGTCATCCCCGCGAAGGCGGGGATCCATTCTGCAACAGATGCCAAGTGCTTAAGTGAGCGATCAATGATCACCGTTTACTGATACTGCGCATAGATTCCCGCCTACGCGGGAATGACGATTTTGTGTGGTTTTGGGATATGATCTCCATAGATCCCCGTCATATTTTGCCTGCTACTGTTGTGAGGCAGGGAAATGAAGGTGTAGCGATCATCGAAAACTGATCCACTAAATACAATTAGTCAGCATAGACTCCCACCTTGACGGCAATGATGCTTGACGCTTTGAATGCTCGATTGTTCACCTTGATTACAAGAAAGCGTGAGTTGTTTAACAATATGTGCGCCTAATTCCTTAGACACTACGTTGTATGATTGATGTGAGTGGTGGAATACATGAGCTCCCTAACGTTACCTTGCCAACGAGAGATTGATCTCTCATCAGAGTTAAACGTCGTATTACAAGACAATG # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGCACAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [8,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTTCACTGCCGCACAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.00,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [78.3-38.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.51,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //