Array 1 14377-13679 **** Predicted by CRISPRDetect 2.4 *** >NZ_WOYG01000001.1 Halomicrobium mukohataei strain pws1 Scaffold_1, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ================================================================================================================================================================================================================================================ ================== 14376 30 93.3 36 ................T.G........... TTGAGGTGAACGGCGTCCTCAACGTTTGCCCACCGC 14310 30 90.0 36 ................T.G..A........ TGCAAGGGAACGTACTGGGAACGTTCCGAGAGCAAG C [14295] 14243 30 76.7 240 ...........C.T..G.A.T..CC..... GCTCCGCGAACTGGTGGCGATCGTCGCCGTCGACGTGATCGCGCCGGGCACGAGCCAGTACGATCGACGGACGCTCGACGCCGCATTGCGTGAGTCGGTGCGACACCGTCGCAGGCGAGTCGCCCACGTCGTCAGCCTCGTTCCATCGACCCCCCGGGGGTTCAGGGGGTATCGCTGGTCGACGACAATAGTGAAGTGAGTTCGGGCGGCATAGCCGCTATGGCCCGTAAATCGGCCATG 13973 30 100.0 37 .............................. ACCCTGTCGTTCGTCCCGACGGGGACCGCTTTGGACG 13906 30 100.0 35 .............................. ACGTCGATCGTGATGCGGATGCGGTTAGTCCCGCC 13841 30 100.0 36 .............................. GCACACGGGGTCCTATCGGCTCATCTCGCCGTGACG 13775 30 100.0 37 .............................. GACTCCCCGGTCGAGGTGCCCCGATACGACCACTACC 13708 30 93.3 0 ................T.G........... | ========== ====== ====== ====== ============================== ================================================================================================================================================================================================================================================ ================== 8 30 94.2 65 GTTTCAGACGGACCCTCGTGCGGTTGAAGC # Left flank : ACAGTGAGGAGTACGTCGCTGTCGTCGTTTCAGACGGACCCTTGGGCGGTTGAAGCCCGCTACTGTCGACGACCTGAGCGTGTCATAGAACTCTTCACACACTATAGTCAATCTGATTACTGTTATAGCAGATTACTAACTTAGATATACGTGCACTAGGTGCACGGCGTTTAGAACCAGTTAGAGAGTTCCTTTTCGTTTCCGAATAATGATTTCTCGCACCTGTTCAACGTGGTTCGTCTCGGATTGAACGAATGCTGTGAGGATGGCTTTGACGATCTCGGAGCGGCTGACTCCGAGATCGTCACACTCAGCGACCAGTTCATCCACTTCTCGCACGATTTCCTCGTCAACAGCCACTCCGAACTTNNNNNNTACGACAAGCTAAGAACAGCGTGCACCAAGTGTACGGCGCTTTCAATTCGTCAGAGCCGATTCAGCAAACCATGTGAACTCTTCTATGACACCCTCGTCGACGACCTTGCTATCGTACCGTTCAG # Right flank : ATGGTGGTTGCGTTGGTGTGTCGTTCGTCGTCGGTTTCAGAGGCTGTGTTGAATCGCCATAAGGCGATAGATTTCACTGTTTCACAGCACGTTTAATGTTGTAGACGACACACATCAGGGCGATTTCGCGGAACNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGCCGAGTTCACGCAATGCTTCGCGGAGCGCTTGCTTGTCATAGCCTTTGTCGGCGGCCACAGACCGCAGATCGCCCGCATTCCGGCGGGCGATCTGGTCGCGTCTGAAAACCGTTCAGAGTTCACCTCCATTCGCTGTGACTGATACGCTACACCGCATCTTGTTTTGAGTTGACCGTTGGAGGAATTCGTCAAAGAACTCGCGGTAGTAGTCTGGATTGGCGTATTTCGTGAGGGTCAGTTGCAACAGCGTATCCAGTCCCTCCTCGCTCCATTGCATCCAGTCACGCTTGCAACGCTTGGCTACCTCACCCATTGCTCGTTCGA # Questionable array : NO Score: 2.94 # Score Detail : 1:0, 2:3, 3:0, 4:0.71, 5:0, 6:0.25, 7:-3, 8:1, 9:0.98, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTCAGACGGACCCTCGTGCGGTTGAAGC # Alternate repeat : GTTTCAGACGGACCCTTGGGCGGTTGAAGC # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [7,5] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTTTCAGACGAACCCTTGTGGGGTTGAAGC with 90% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-2.10,-3.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [2-13] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [46.7-50.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.78,4.87 Confidence: HIGH] # Array family : I-B [Matched known repeat from this family], // Array 2 16843-14821 **** Predicted by CRISPRDetect 2.4 *** >NZ_WOYG01000001.1 Halomicrobium mukohataei strain pws1 Scaffold_1, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ================================================================================================================================================================================================================================================ ================== 16842 30 100.0 36 .............................. TTCGACTGACTCAACACCTCCACCGACATCAACCTC 16776 30 100.0 39 .............................. CACTTGCGATTCGTGGCGGTCAATCTCGGAGTTGATCTG 16707 30 100.0 35 .............................. CTGGATCGCGGACCTGACCGCGTGGGTCCGCGACG 16642 30 100.0 43 .............................. CCGCCGGGAGGAAGCCGACACGGTCGCCCACGTCGGTCGCCTC 16569 30 100.0 37 .............................. ACTGAACACGAGGTGACTGACTCAAACGGTAATGTCG 16502 30 100.0 38 .............................. GAGGAGAACATGGAGCAGGACGTGCATATCTGGAATGT 16434 30 100.0 37 .............................. CAGTGCCCGGAGAACTTCGACAAGATCGACTGGCTCG 16367 30 100.0 38 .............................. GTGATCTCGATGTAGGGGAACTCCAGCCGGATCGAGTC 16299 30 96.7 34 ....................A......... GTCGTCAGTCCGACCATGCCCTTTAGCTGGCCGA 16235 30 100.0 36 .............................. GAAAAGTACAACGACGGCGTCGACCTCGTCGAGACG 16169 30 100.0 35 .............................. AACAGGTGGAACGAAGGGGCACCGACTATTGACTT 16104 30 100.0 36 .............................. AACGGCGGGAAGGTCCGAGCGTCGGTCACAGCCGGG 16038 30 96.7 36 .....................A........ TGCAAGGGAACGTACTGGGAACGTTCCGAGAGCAAG 15972 29 90.0 35 ................C...A.-....... GAAATGAAAGCCGCCGGGAAGCTCGACCGGGATAT 15908 30 86.7 36 ........T........T..TC........ TGGTTATCCAGGTCCCGAGCGATGTCGTTCCGAAGC 15842 30 76.7 240 ...........C.T..G.A.T..CC..... GCTCCGCGAACTGGTGGCGATCGTCGCCGTCGACGTGATCGCGCCGGGCACGAGCCAGTACGATCGACGGACGCTCGACGCCGCATTGCGTGAGTCGGTGCGACGCCGTCGCAGGCGAGTCGCCCATGTCGCCAGCCTCGTTCCATCGACCCCCCAGGGGTTCAGGGGTTATCGCGGGTCGACGACAATAGTGAAGTGAGTTCCGGCAGCATAGCCGCTATGGCCCGCAAATCGGCCATG 15572 30 100.0 37 .............................. GAGCTGCACGCCGTCTGATTTGGTCCTCCGAGACTGT 15505 30 100.0 35 .............................. CCGACGTATCGACTCCCGACCAACAGACCCCCCAG 15440 30 100.0 34 .............................. GAGAGACGGTCGCGTAGCACCTGCTCGATGCAGT 15376 30 100.0 34 .............................. GGCCGGCGCGCTGGCCAGTCTGTGATCGGGACGA 15312 30 100.0 36 .............................. GGTGCTGGAATACCTCTTTTCGGTTGTTACAGTTCC 15246 30 100.0 35 .............................. CGTCGTCAAACAGCGCCAGACACTCAACGGGCAGA 15181 30 100.0 35 .............................. GATGGATGGTGTTAGTGAAAATGCTGATACCTATA 15116 30 100.0 36 .............................. GACGACAGCGTGCTCTCGGTCGCCGGATCGACCAGC 15050 30 100.0 37 .............................. AGCACGATCCACTGGCCGGGGACACTCTCAAACGACA 14983 30 100.0 38 .............................. GAGTGTCAACGACGTGAACGCAATGGCACTGGAAATGA 14915 30 100.0 35 .............................. TGAAGGGAGACAGTGAGGAGTACGTCGCTGTCGTC 14850 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ================================================================================================================================================================================================================================================ ================== 28 30 98.1 44 GTTTCAGACGGACCCTTGGGCGGTTGAAGC # Left flank : GTCCTGATCGCTTTCTCGCCACCAGCCAATCATATGCTGTGTAGGCTTCTTGCGGTTGATTTTACCCTCCTGATGGAGTTTCTGTAGTCTCTTGTGAATAGCAGTCCGAGTGATCGGGAGTACCGTTTCCAGCTCACTCGCCGTTACAAATGGTCCATCAATCTCGTCGAACGCCTCCAGTAACTCCTGATCTGAGACCAGTTGATTTCCGTGGGAAGAGCTCATCTGTTGTGGCTGGCTTTTAGTTACCGTACGACAATAATCTTATGCTGGTGCCGTAATATAATCTGAGTACAGGAACACACGCGCCGCTGGGCGATTTCCTTCGGAGACCTGCTTCCACGTCGACGGGCCGATCGTCGACGCCGTCGGAGGCGAGTCGCCCACGTCGACAGCCTCGTTCCATCGACCCCCCGGGGGTTCAGGGGTTATCGCGGGTCGACGGAAATAGTGAAGTGAGTTCCGGCAGGATAGCCGCTATGGCCCGTAAATCGGCCATG # Right flank : CCGCTACTGTCGACGACCTGAGCGTGTCATAGAACTCTTCACACACTATAGTCAATCTGATTACTGTTATAGCAGATTACTAACTTAGATATACGTGCACTAGGTGCACGGCGTTTAGAACCAGTTAGAGAGTTCCTTTTCGTTTCCGAATAATGATTTCTCGCACCTGTTCAACGTGGTTCGTCTCGGATTGAACGAATGCTGTGAGGATGGCTTTGACGATCTCGGAGCGGCTGACTCCGAGATCGTCACACTCAGCGACCAGTTCATCCACTTCTCGCACGATTTCCTCGTCAACAGCCACTCCGAACTTNNNNNNTACGACAAGCTAAGAACAGCGTGCACCAAGTGTACGGCGCTTTCAATTCGTCAGAGCCGATTCAGCAAACCATGTGAACTCTTCTATGACACCCTCGTCGACGACCTTGCTATCGTACCGTTCAGGTTTCAGACGGACCCTTGGGCGGTTGAAGCTTGAGGTGAACGGCGTCCTCAACGTT # Questionable array : NO Score: 5.42 # Score Detail : 1:0, 2:3, 3:0, 4:0.90, 5:0, 6:0.25, 7:-0.73, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTCAGACGGACCCTTGGGCGGTTGAAGC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [7,5] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTTTCAGACGAACCCTTGTGGGGTTGAAGC with 90% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-2.60,-2.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [51.7-45.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [1.15,4.5 Confidence: MEDIUM] # Array family : I-B [Matched known repeat from this family], // Array 3 2794933-2796343 **** Predicted by CRISPRDetect 2.4 *** >NZ_WOYG01000001.1 Halomicrobium mukohataei strain pws1 Scaffold_1, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ====================================== ================== 2794933 30 100.0 36 .............................. CGTGCTCGGCTCGCCGTCGCCGTCCTCGATCTCCTC 2794999 30 100.0 37 .............................. GATCCCCGCGACCTCCCCGACCGCGTCGGCGAGTTCG 2795066 30 100.0 36 .............................. GGACCCTCTTGTGGCTGAAAAGGAGATGCCGCCAGT 2795132 30 100.0 37 .............................. ATCCGCTCCAGCTCCTGGAACTCGGGATGCCAGTCGA 2795199 30 100.0 36 .............................. CACTGGTTAGAGGAGTTAGAGTCTTTAAAAGAGGGT 2795265 30 100.0 38 .............................. GTCGAGCGCACGGCGACGATCCCCGCCGCGTCTGGATG 2795333 30 100.0 35 .............................. TCGGCCACCGCGACACGGGCTGGGACTTTGCGTCA 2795398 30 100.0 34 .............................. GAATCCCGCCAGAAGTTCGGGAGTTCGATCAGCA 2795462 30 100.0 36 .............................. TTGAGTTCGATCCCGCCCTCGCCGATAAGGATGGTC 2795528 30 100.0 35 .............................. GACACGGCGGTCGAGGTGCCTCGATACGACGGGTA 2795593 30 100.0 33 .............................. CCAGATTGCCTTCGCTCAGTTGGTCGCCGTCCT 2795656 30 100.0 37 .............................. GCTCTCGCCAGTCTCGACCGGGCGATCCTCCATCTTC 2795723 30 96.7 36 .............................T TGCTTCAGATGCTGTGCGCCAGTGTCGAGTCGCCAG 2795789 30 100.0 35 .............................. CCGCCGTTTGGGTAGATAACCACCCAACCACCGGG 2795854 30 100.0 38 .............................. GCCCAGGTCCTCGAAGCCCTCGCGTAGCTCCTCGATCT 2795922 30 100.0 38 .............................. CGTGGAGATAGCGATGCCCTGCGGGCCGTACTCCACGT 2795990 30 100.0 36 .............................. CGAGGCGAAGGCTGAGTAACCGGCGGTAGAGGCCCG 2796056 30 100.0 37 .............................. CATCTCCATCCGGATCTTCGAACCGGACCGTGTACGG 2796123 30 100.0 33 .............................. GATACGTCTGTCGCTGCGCTGTACCGATTCACC 2796186 30 100.0 32 .............................. CTGTCGGCCGCTCAGTGATATCGAGCGACCCG 2796248 30 100.0 36 .............................. CGCGACCAACTGCGCGACCTCGCCGGCATTGACCCC 2796314 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ====================================== ================== 22 30 99.8 36 GTTTCAGACGGACCCTTGTGGGATTGAAGC # Left flank : AGCTGGGAAAGAAGGTGAGCTATCAGTATCTCCTCCGGGTCGAGGCGTACAAGCTCAAAAAGCATCTCCTGACCGGCGAGGAGTACGTCCCGTTCCAACGGTGGTGGTGACGCGTGGTCTACGTGGTCGTCGTCTACGACATGGAAGCCGACCGGACACACAAGATGCTGAAGTTCCTCCGCCGGTATCTCACCCACGTCCAGAACTCGGTCCTCGAAGGAGACGTGACCGAGGGGGATCTCGAAAAGATCCGCTCTGGCGTCGACGACCTGCTCAAACCCGGGGAATCGACGATCATCTACCAGATCTCCTCGGAGAAGCTGGTCGACCGAAGCGTGTTCGGTGACGATCCCGCCGCAGACGACCAGTTCCTCTAATACTGTCGGCAGTACACCCCCACTTCCATCGACCCCCCGGGGGTTCGGGGGCTATCGAAGGTCGACGGAAACGATGAAGTGTGAACGGCGAATAGAGGTGTATACGTGGCTGAATCGGCCATG # Right flank : CCCGCTCGACGACGCCGACGCCGTCGACCTCGACCGAGTTTCAGACGAATTCTTGAGGGCCCACAACACTGTCGCCGGGGACGATCGCCTCACTTCTTTCGGATCGTCCCGCCGTCCAGGCCCTCCCACTCGACCCGGTATCCGAGCGCCGACAGGACGGCGCTGGCGTCGTCGAGCCCGTACTCGTCGAGGATCGTCTCGGCGGCCGACAGCGACATCCCGGTCTCGATCTCGTCGTCGACTGCCGACAGCACGGCGGGCCTGACCAGCGTCCGCCCGACGCGCTCGTGGTCGGGAACGGATCGGTCTTCGACAGTGGCCTCGCTGACGCCGTGTGCCGCGGCCAGTTCAGCGAGCGTGAGCACGTCGGCGTCGGGCGTGAGTTCCTCGGGGAGCGTCTCGGCGTTTGCCGCCGTCAGCTCCGACTCGTATCGCCGCAGTGCGTCGCGAACGTCCTTGATCCGGACGGTGCCCGAGTAGGGGATTGCTCGGTGGTCGCG # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTCAGACGGACCCTTGTGGGATTGAAGC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [6,8] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTTTCAGACGAACCCTTGTGGGATTGAAGC with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-4.20,-3.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [48.3-35.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.14,0.37 Confidence: HIGH] # Array family : I-B [Matched known repeat from this family], // Array 4 3305539-3306295 **** Predicted by CRISPRDetect 2.4 *** >NZ_WOYG01000001.1 Halomicrobium mukohataei strain pws1 Scaffold_1, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ====================================== ================== 3305539 30 100.0 36 .............................. TACCGAGATGACAGACGACAGCGACACCTATGACCC 3305605 30 100.0 37 .............................. GAGAAGACAGATATGCAATTCTGGATGCAGGTCGCCA 3305672 30 100.0 37 .............................. GGAGGTCCAGAGACGATGAACATTCCAGACGTTCTTG 3305739 30 100.0 34 .............................. GAGTATCTCCCGAAGTGAGAAGTGGAGTCACCTC 3305803 30 100.0 35 .............................. TCGGTCATGGTGTGACCGGACGCATCGCTAACCGG 3305868 30 100.0 37 .............................. TCAGCCGACCCCGAGCAGACCGTGAGCCACGAGCTGC 3305935 30 100.0 38 .............................. ATCATCGCCCGCGCGGTGCGCGAGGGGGCCGCCCGATG 3306003 30 100.0 36 .............................. CTTGGGACAACGAGTAGCGGGATCTCGCGGGAGTGG 3306069 30 100.0 37 .............................. ACGTCGGGGGGACGGCAGAATACGTCCTCGTCGACGG 3306136 30 100.0 35 .............................. CACAGGAACCGGAATTGCACATGAAAAGTAGGTTT 3306201 30 96.7 35 ............T................. TCGGTGGTCGGTCTCGGCATGATCGCGGCGGCGTG 3306266 30 96.7 0 ........................C..... | ========== ====== ====== ====== ============================== ====================================== ================== 12 30 99.5 36 GTTTCAGACGGACCCTTGTGGGATTGAAGC # Left flank : CGTTGATCTCCTTGACCGTGATCGTCGCCTTCGACGGGACGCCGTCGGGAGGGTTCTCGGGTCCGTCCTCCCGTCTGTGGGCTCTGTCGGCGTGCTCGCCGTCGCCGTCGTCGGCCCCATCCAGACGATCGTTCCGTTCGCGAAACGCTGCGAGCGCCTCGGCGTACTCCGCAATCTGGCGGAGACGAGTCGGCGAACACTGCTCGAGTCCGTCGCCGAGGTCATCGGGCAGGTCTGTCGGCGGCGTCGGTGGATCGTCGCTCACTTCGATCTCCCTGTTAACCAACACGGACTCCAGCACCGTCGTTCTGTTGGTTAAGACGGTCGGACCGATCCCTCTGTCGCCGGTTTCCCGCCACGTCGACCGTTCTCGCCCGCGTACTGACCGGGGAGCACGCGTTTCCATCGACCCCCAGGGGGTTCGAGGGGTATCGAGGGTCGACGGAAACCATGAAGTGCAAACGGCAAATAGCGGTGTACACGTGGTCAAATCGGCCATG # Right flank : CTAGCCGGTATCGTCCGGCGACTTCCACAGGGCTTCCAGATCGTCCCGTAGATACCGGATCGATTCGTACCGATCCCGCTTTGCCGTCGCCAGTGCCGTGCGTACGATCTCGTCGAGTTCGGGCGGCACGTCGTCACGGCCGGCACTCGGGGCTGGTGGTGGCCCGTCGTCGCGGACGATCCGCTTGCGGACGGCGAGGCGTCCGCCGCTCACGGGGGGCTCGCCGCGTAGCATCGCGTACAGCACAGCGCCGACCTGGTAGATGTCCGTGACCGGGTCCGGCTCACCGAAGGCCTCGGCGTCGAACTGTTCGGGCGCGGCGAAGTGCCGGGAGAACCCCTCCATCGAGTCGGTTCGGTCCCGCAGCTTTCTCGCGAGGCCCCAGTCGGCGAGCTTCGGCAGGTCCCAGCGTGACGGTGCCGTTTCGGTGAAGAGGACGTTTCCCGGCTTGACGTCCAGGTGGGCGATCCCGTACTCGTGTGCGACTTCGAGCGCGCGGC # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTCAGACGGACCCTTGTGGGATTGAAGC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [6,8] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTTTCAGACGAACCCTTGTGGGATTGAAGC with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-4.20,-3.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [48.3-40.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0.37 Confidence: HIGH] # Array family : I-B [Matched known repeat from this family], //