Array 1 25-4853 **** Predicted by CRISPRDetect 2.4 *** >NZ_BJTF01000063.1 Flavobacterium psychrophilum strain KHIR-1705 contig00063, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================================== =============================== ================== 25 46 69.6 29 TAAT.T....A.ACC...CGGGT....................... TTTTGTTTTCGTCAAATTCCCCATTTGTG 100 46 100.0 30 .............................................. ATTAATGCGCTAATTATCGAAGGTAGCACT 176 46 100.0 29 .............................................. AAGTACATCCCCAGTATTGAAACTATGCG 251 46 100.0 30 .............................................. AACACCCAAACATAAGAGATGAAACATAAG 327 46 100.0 30 .............................................. GCAGACGCCCAAGGAATACAAGCAGCTGCA 403 46 100.0 30 .............................................. CAGTTTTTTGAAATGGGTGTAGATATTCTT 479 46 100.0 30 .............................................. TTGTCCATTCTAGCAGGTAGTAGAGATATA 555 46 100.0 30 .............................................. ATTTCTTCATTAAGAAGCCGCACGTTAATA 631 46 100.0 30 .............................................. AAGTCGTGAATAAAGATATACACGACCCTC 707 46 100.0 30 .............................................. ACTATGATTTTTAATAATCGGATTACCTGC 783 46 100.0 30 .............................................. TTTGAAATCTTTTCTTGCTTGTTCAGTTAA 859 46 100.0 30 .............................................. TTTGGATCATTCCGCATATTTGCATCATGC 935 46 100.0 30 .............................................. TGAAACTATTGAGGTAACAAATGAAATGTA 1011 46 100.0 30 .............................................. ACGACCTACCTTATTAACAAATGACTTTTC 1087 46 100.0 30 .............................................. ACGAATTAATAGCTTTTAATAACGCGTTAT 1163 46 100.0 30 .............................................. CTTTTGTGTTGTTTTATGTTGTACATTCGC 1239 46 100.0 29 .............................................. TAGATAAAAGAACCTTTTGTTCGTCTTTT 1314 46 100.0 30 .............................................. CTTTCGCAAAAGGAGTTGATTCAAAAAATG 1390 46 100.0 30 .............................................. AGAATAACAAGAGATACTAATACATCATTT 1466 46 100.0 30 .............................................. CTATTCATTGAATAAGCATTGAAGGTATCA 1542 46 100.0 30 .............................................. TTGATGACTGGGAGAGCCATTATGACGTAG 1618 46 100.0 29 .............................................. ACATTACAATATAATTACGGCTTTGAATA 1693 46 100.0 30 .............................................. TTTGCCCAACAGACCCTTCTCCTAATTCCG 1769 46 100.0 30 .............................................. ATTGAGGTACTTAACATTATTATCGCCACG 1845 46 100.0 30 .............................................. TGATTATGAGGTTTCTAATATAGAAAGGTC 1921 46 100.0 30 .............................................. AATCCCCCAGAAAACAAGCTAAATGATTCC 1997 46 100.0 29 .............................................. TTGTTCAATTTAATGAATAAGGTAATTGT 2072 46 100.0 30 .............................................. GGATAAATAGTATACGGCAAATCTAACTGA 2148 46 100.0 30 .............................................. CCATTTGGGAAGCACAATTTGGCGATTTCA 2224 46 100.0 30 .............................................. TAATTTAGAATTTTTCATTTTCCCTCATGG 2300 46 100.0 30 .............................................. TTATTGATACCTTATTTGAATCTACTTTTA 2376 46 100.0 30 .............................................. GCGTACTCACAAGGGAAGATTCATCCAACA 2452 46 100.0 30 .............................................. ACGCTTGACAAAAAATTAAGCCTATTTTTG 2528 46 100.0 29 .............................................. TCTCTGCTTCTAATGAACAGACTCTTTAT 2603 46 100.0 30 .............................................. CAGGTAAAAATCTAATAAGCGTACCAGGTA 2679 46 100.0 30 .............................................. CGTAACTGATCCACCGTGATTTACGTTTCC 2755 46 100.0 31 .............................................. AACGCTGGACTTAAACATGAGTATCGAGTTA 2832 46 100.0 30 .............................................. CAGGAAACAGGATTCTAAAATGGAAAAAGG 2908 46 100.0 30 .............................................. TCACTATTCTTTGGGGCTTGCGAAGACTTC 2984 46 100.0 30 .............................................. TTAATTTTTAAAAAGAAGATATGGCAAAGT 3060 46 100.0 30 .............................................. AAAAAAAACAATATATGAGTCCTACTTTTG 3136 46 100.0 30 .............................................. TAAAAAGGGTATTAGGCACGCCTTTATACG 3212 46 100.0 30 .............................................. AGCAGTAGGTTCGCAATATACTTTGAATGG 3288 46 100.0 30 .............................................. CAACGTTCGTAAAACTATTAAGAGAATTGG 3364 46 100.0 30 .............................................. CGTTGGTTTCGTAACAATGCATTATCTCTT 3440 46 100.0 30 .............................................. TGATTGTCCAGAAAGTGGTCAACCTTTTGG 3516 46 100.0 30 .............................................. AACTTTTGGGCGCAAGTGAATGTAGGCATA 3592 46 100.0 30 .............................................. AACAATAAACGAGAGTCGAGAATACTTAGT 3668 46 100.0 29 .............................................. ATAAAAAAGAAATAGAGAGTATAGATAGT 3743 46 100.0 30 .............................................. TTTTTTTAAAAACAGATAAAGAGCAACTTC 3819 46 100.0 31 .............................................. TGATGTTGTGGTTTATGATTTTGGTGATAAT 3896 46 100.0 30 .............................................. ATAGAAGATCAGCAAGAACTAGATAGTTTA 3972 46 100.0 30 .............................................. TTTAACGTTATGGTGCATTAGCAAAAAATA 4048 46 100.0 30 .............................................. TATCTGTTTGTTTGGTATCATTGCGGGTGC 4124 46 100.0 30 .............................................. GTTTATAAATGGAATGTATTTTAAAGTTCC 4200 46 100.0 30 .............................................. TGTACAATTGTTCATTTTTTGGTCTAGCAA 4276 46 100.0 30 .............................................. AAATATGCTTTCGTTTATGCCGACTAAAGC 4352 46 100.0 30 .............................................. TTACATACATAATCAATGGATATGGTTGTT 4428 46 100.0 30 .............................................. CCTGAATAGATTCTTTTCCGTATTGTTTTT 4504 46 100.0 30 .............................................. TCAAAGAATATAAAGACGCTAAAGATGCTG 4580 46 100.0 30 .............................................. TCACGATGTATTTAGAAAATATGGTTATCC 4656 46 100.0 30 .............................................. TGCTTGTAGTAGCTGTTAGTGGCATACCAC 4732 46 100.0 30 .............................................. CGCAAAAATATTATTACTAGGAGCAATCCT 4808 46 100.0 0 .............................................. | ========== ====== ====== ====== ============================================== =============================== ================== 64 46 99.5 30 GTTGTGAATTGCTTTCAAAATTGTATTTTAGCTTATAATTACCAAC # Left flank : ACTTTGCGGGATAGTGTCATCAAAT # Right flank : CATACCGCGAGTTAATCGTTTGATATGTTGGTGGTTATATGCTTATTTTGAAATTAAAAAACAGTTCTGTTTGTGTGTTGATATTCTGGTAGGTCTAATATTTCTAAATCCTATTTTTCAAAAAAGTTCTAATTGTTGCGAAGGTTTGTCTGTTTCTACAGGTTTTTTTCCATAAAAAAGCTCCATCATACCAAATTGTTTATCGGTTATTTGCATCACACCAATTTTGCCATGTTCGGGCAAACTATTTCTTATTCTTTTGGTGTGTACTTCGGCATTTTCTCTGCTGGCACAAAACCGCATATAGATCGAAAATTGAAACATAGAAAAACCATCGTCCAATAATTTCTTGCGAAATTCACTGGCAATTTTACGCTCTTTCCGCGTTTCGGTGGGCAGGTCAAAAAATACTAATATCCACAAACTTCTATACTGGTTTAAACGGGTGTAATGTTCGTCATACATAAATAGGGTATAAAATTTTTCTTGCGGCTCCCGCA # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGTGAATTGCTTTCAAAATTGTATTTTAGCTTATAATTACCAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:73.91%AT] # Reference repeat match prediction: F [matched GTTGTGAATTGCTTTCAAAATTGTATTTTAGCTTATAATTACCAAC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-3.00,-0.90] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [14-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [23.3-71.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.87,0.68 Confidence: HIGH] # Array family : II-C [Matched known repeat from this family], //