Array 1 3876864-3879513 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP012426.1 Klebsiella pneumoniae strain KP5 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 3876864 29 100.0 32 ............................. GAGCAGGCACCCGCCGCAACGACGAAGAGCGC 3876925 29 100.0 32 ............................. AAATCAGCCAGCACCACGATTCTGGGAAATTT 3876986 29 100.0 32 ............................. ACAGGCTTACCCGTATTGAGACGGTTGCTGAA 3877047 29 100.0 33 ............................. GAAACCCCATCAGATGACCCTCCCCATGTTGGC 3877109 29 100.0 32 ............................. TTGCCTGGTCTGCTTGGTGATGATCCGTGGTA 3877170 29 100.0 32 ............................. TACAGAACGACTGAGGCGGCGTGTATTGCATA 3877231 29 100.0 32 ............................. GATCTTAACTCTATTGCCAATGGCGCAATTCA 3877292 29 100.0 32 ............................. GGCGATGCGCGCTCTGCTGGCTATCGGTAAAA 3877353 29 100.0 32 ............................. AATGCAGCAACCGGCAAATATATCGCCGGTAA 3877414 29 100.0 32 ............................. GGGCTGCCGCACGCCTGGGACGAGTCGAGCCC 3877475 29 100.0 32 ............................. CCGCAATAACAAAAATAAATGAGGGTTAAAGT 3877536 29 100.0 32 ............................. GTAAATGGGAATGAGTAGAAGAGCGTCATTGG 3877597 29 100.0 32 ............................. CCCCCGCGCACATGCTTAAACGCGCTATCACG 3877658 29 100.0 32 ............................. GGCATCTGTTGTGTAATGTTGAGTTTTTTTCA 3877719 29 100.0 32 ............................. CAGGTTAAACATGTAAAAAATGACCGTCGCCG 3877780 29 100.0 32 ............................. CACATTGCCCGGTCTGAAAAGTATTTGAAAAT 3877841 29 100.0 32 ............................. TCCGCACAGTCAAACGCTCCAGACACCAACCC 3877902 29 100.0 32 ............................. CCGGAACACCACCAGTAACAGCTACTGTAGGC 3877963 29 100.0 32 ............................. TGACCCTGTTGATTTTGTTCCAGGTAATACGT 3878024 29 100.0 32 ............................. TTAACCTCGTCGTTCTGGTTTCCGCCCAGGAT 3878085 29 100.0 32 ............................. GAACCTGAATTCGAAGGGTGGGTCATCCTTCC 3878146 29 100.0 32 ............................. GGACCCCGAGCGACCCGGTCACCCTCCGACCT 3878207 29 100.0 32 ............................. CCGTCGAACGGCGGTTATATCCATCTTGAGTC 3878268 29 100.0 32 ............................. ACCGATCCCACAATTGCGGCGGTTGAGATTGA 3878329 29 100.0 32 ............................. GTTGGTAATTACTGCTGTGTGTTACGGATAAA 3878390 29 100.0 32 ............................. CCGATTGTCTGGCGGTCGAGCGCCATTTGCTC 3878451 29 100.0 32 ............................. TGCCGGACGTTGTACCTGTGAGTTAATTCTTC 3878512 29 100.0 32 ............................. CGATAACCGGGCGTTTCGACTGAACTCACCTC 3878573 29 100.0 32 ............................. TTAATACCAGGGGGCAGGTTCAGCAGGTCCCC 3878634 29 100.0 32 ............................. CCGCTTTAACCCGCTCCGGCAGATCCGGGTGA 3878695 29 100.0 32 ............................. CCCTCCGCTTTCAGGGTGTGGCTGATATCACC 3878756 29 100.0 32 ............................. CGCGCTGCGAATTTGTTGGTCGATTTCGATCT 3878817 29 96.6 32 .............A............... TGGGTAGAGGTTAACTGGTTATTGGTCATTGA 3878878 29 100.0 32 ............................. ATCGCGGAGGCCTTCGGTGTGTCTCTTTCCTG 3878939 29 100.0 32 ............................. CCGTTGTCAATATCTCCCGGCGTCCGCGCCAG 3879000 29 100.0 32 ............................. CACGTCCGGAAACCACGGGTTATCCGTGTAAT 3879061 29 100.0 32 ............................. CAGAGGTCCTTATCTTTTCAACGTCAAAGTCG 3879122 29 100.0 32 ............................. GCAATCCCAGAGCGCGAATATCTTGGGCTCTC 3879183 29 100.0 32 ............................. GACATGGCGCGCGAGTTTATCGACGCCTGCGC 3879244 29 100.0 32 ............................. GGGATGAGCGTTTTCCGGTGGATTCTGATGTG 3879305 29 100.0 32 ............................. GTGATCGTCATGGATATCACTGCCGTTCCGTC 3879366 29 100.0 32 ............................. CAGACAGACAGCAGGCAGCAAACAGGGAAGAC 3879427 29 100.0 29 ............................. GGGTTCACTTGGGTGAAACTGAACTAACT 3879485 29 75.9 0 ...........ATTC...A......G..C | ========== ====== ====== ====== ============================= ================================= ================== 44 29 99.4 32 GTGTTCCCCGCGCCAGCGGGGATAAACCG # Left flank : GTGCTGTCTGCTGGCGAAATTGAACCGCCTCAACCACCGCCGGATATGCTGCCGCCGGCGATACCCGAGCCCGAGTCGATGGGAGATAAAGGGCATCGAGGGCATGGCTGATGAGTATGCTTATGGTGGTGACGGAAAATGTTCCACCTCGCCTGCGAGGACGGCTCGCAATCTGGCTGCTTGAGATCCGCGCTGGGGTATATGTTGGTGATACCTCAAAACGGATCCGGGAAATGATCTGGCAGCAGGTGATACAGCTAAGTGACGGTGGAAATGTCGTGATGGCCTGGGCGACAAACAGCGAATCAGGTTTTGAGTTTCAAACCTGGGGAGAAAACCGCCGTATACCGGTAGATTTAGATGGCCTACGACTGGTTTCATTCCTTCCCCTTGAAAATCAATGAGTTGGATGTTCTTTAATAATGTGAGATTGTTGTGATAAAGTTGGTAAATTGTTGTGTGCTTAAAAAGCTATTATAAAACAGTAATATATCTTTAGT # Right flank : CGTCCACTAACGTTATCGATCCTGAGAGTGGGCACGAAAGCTTGCGGAGAATAAATATCGCTACCTGCCGCTCTAGCGATATCACTGTTTTTTTACCGTCTCCTGGATCGCGCTAAAATCCGGCTCCGGGCAATCCCGACCAAAATTTTCGGCCCATGGGAACGGGGCGCCGTACTTAACATAGCGCTGATACAGGCGTTTGGTTAATTGAGCATCCCGCCCCCATACCCATCCTGTTGCATTACACAGCACGGCAGCATAGGCCTGTGATTTATATGGCAACAGGTCGGCCGCTTTTTCCGCCAGCGTCACCGCCTGCCAGCGATAGTGTAAGAAATGACTGTCCTGTTTTAGCAGGGATCGCTGAACGCGTTGCCGTTCGCCATCACTTATCCACGATGTCACGGCCGAATTATCTTCCGGTCCCTGGTTGTAATAGGGCCATGAATACCCGCCTCCATACAGCGCAAAATCGGGCGCCATCTCATAGCCTGTCAATT # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.50,-12.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-8] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [76.7-51.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.92,0 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //