Array 1 870159-870613 		**** Predicted by CRISPRDetect 2.4 *** 
>NC_013721.1 Gardnerella vaginalis 409-05, complete sequence		Array_Orientation: Forward

  Position	Repeat	   %id	Spacer	Repeat_Sequence             	Spacer_Sequence                  	Insertion/Deletion
==========	======	======	======	============================	=================================	==================
    870159	    28	 100.0	    33	............................	TAAAAGTATGATGCATTGAAGTAACATCTAGTG	
    870220	    28	 100.0	    33	............................	CAAACGTGTCCATGCTTACGCCGCAAGTTTTAA	
    870281	    28	 100.0	    33	............................	GGTGACAGGATTGTTTTTACTGACGGTCAAGGC	
    870342	    28	 100.0	    33	............................	CGGCTCAGCCGTTAAAACTAGATCACACTTGTA	
    870403	    28	 100.0	    33	............................	CGACCTTCAGCAGTTGCCGCAGTTCCACGCAAA	
    870464	    28	 100.0	    33	............................	TACTTTTGGCTGGCTTGTCAACAGGAACATGGG	
    870525	    28	 100.0	    33	............................	CAAGCTCACTAATAATGGCGAAACGCAGGGTAT	
    870586	    28	  82.1	     0	.....................C.CTG.G	|                                	
==========	======	======	======	============================	=================================	==================
         8	    28	  97.8	    33	GTCTTTCCCGCATACGCGGGGGTGATCC	                                 	       

# Left flank :   ATAATTTTATTCCTAATGAAATTATTGAGTTAACTGGTATTACATCCAACATGCTTGAATCTTATGGTGTCAGATTAGATTTAGCATTAAAAGAATTTATTAATTTTGTCGAAAGATTACCTGTACTTGGATATAACGTACAATTTGATATGTCATTTTTAAATTCTGCTTTATCTTCATTAGATGAAAGATTTGATCATTCTCTTTCAATTAACAAAATTTTTGATATTTCTCGTTTTGTAAAGAAAGAAAAGAAATTTTTAAAAAACTACCAATTAAAAACAGTGCTGCACGAATACAACATTGCTGAATCTGTTCCACATAGAGCTCTTCTGGATGCTAGACTAACAGCGCATCTTGTTTTTAATTTGACAGAATTGTTAAAATTTCTTGCATAATAGTAGAATTGAAAGTGATGCGCAATAATGATAGCTTTGAAAAGTAAATAATTTTTGCTGTTTAATCTTGGAAAAATAGCTATTTTATTGGGATTTTTAAGT
# Right flank :  GACCTGCCTGAGCGCTTAAAGCGTAGCGCGCGAAGGCAGGTCGTCGCACTGCGCTAGTAACGATAAATCGCAATTATTCGTTATTAACGCAGATTAGCTACTGCACCAGTAACATATGACCGTTATTTTCTCAGTCAAGTATCTGAGAAAGTAACGCTAATAAGCAAAACACTGTTAAAAACTCAGTCAAGTATCTGAGAAAGTAACGCAAATAAGCAAAACATCGTTAAAAACTCAGCTAACCAACTGAGAAAGTAACACTTGCGCTCGCAAATGCTCCAATCCATACGCATAACAAACATCCAACCAACACACGCAAACACCACCAAACGACACGCCAAATAGGCGAGGGCTTGCATTTGAGAATATTTCGGGTATAGTAGTTACTCGTGCTTCGGCGCTGACATTGTTCAGTAAAGTTGCATTGCGGACATAGCTTAGTTGGTAAAGCGCAACCTTGCCAAGGTTGAGACCGCGGGTTCGAGTCCCGTTGTCCGCTC

# Questionable array : NO	 Score: 6.15
# 	Score Detail : 1:0, 2:3, 3:0, 4:0.89, 5:0, 6:0.25, 7:0.01, 8:1, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GTCTTTCCCGCATACGCGGGGGTGATCC
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     R [3,7] Score: 0.37/0.37
# 	Reference repeat match prediction:         F [matched GTCCTTCCCGCACACGCGGGGGTGATCC with 96% identity] Score: 4.5/4.5
# 	Secondary Structural analysis prediction:  NA [-9.90,-9.80] Score: 0/0.37
# 	Array degeneracy analysis prediction:      F [0-5] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: F [78.3-38.3]%AT Score: 0.27/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         F [5.18,0.37   Confidence: HIGH] 

# Array family : I-E [Matched known repeat from this family],   
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