Array 1 86060-86574 **** Predicted by CRISPRDetect 2.4 *** >NZ_QGDW01000012.1 Fibrobacter sp. UWB6 Ga0136278_112, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================================ ============================== ================== 86060 48 97.9 30 ....................................A........... AGATTAGTAAAAACACGCCTACCACGCTTT 86138 48 100.0 30 ................................................ AAGTCCGCGAAGTTTGTCACGCCCGTATCA 86216 48 100.0 30 ................................................ CCGCACGCTCCGCTGGGTGCTGGTCCGCAA 86294 48 100.0 30 ................................................ CTTCGCGAAATTCAAACTCTTCACGTCCCA 86372 48 100.0 30 ................................................ TCGAGTACGCAGACATAACGTCCTTATCCT 86450 48 100.0 30 ................................................ ATTATAAACATCGAAACGATCAACATCATA 86528 47 79.2 0 ..................................-..AAGC.TC.CCA | ========== ====== ====== ====== ================================================ ============================== ================== 7 48 96.7 30 GTTGTGAATTGCTTTCAGATTTTCTAGTTTTACTAGTGCAATGACAAC # Left flank : GCATTTGACGCCTTTGGCGTCTGCAACTACGGCTCAGTCATAATAAAATGCAAGCATTTTATTGCGACGTTCGCCTTGTATGCTATTCAATATCGAAACTGCGGAGCATCTCTCCGCTCGGCCCCGTTTCCTTTACAAAGACGTCGTAGCGGATTCCCTTGTAGAACGGGCTTACTTCGACAGTCTTTTCGGGCTCGGGATCCCTGAGCTCATAAATCTTGATGCCGAGAACCGCTTCAAGGAAGGGGTGGGCGATTTCCTTGTGACTGAACACCATTGCAAACATGAACCGGTCCGTAATGGGAAGCTGTTCAAAAGGCGTGCGTTTGTTTTCCATTTTCAATTTCGCAACCGGAACGCGCCGATTTTCGCGAATAAGGAGACGATCCCTATCTATTACTATATACGCCACTTTTGAAAAAAGTGTCTGATTTTTGCCCTGGATATAGAAAAACTTGCTATAACAACCGCGCAACTTATGCGCTGCAGTTGATTTCTGA # Right flank : TAATTGTAAGCTTCCCCATAATTGTCAGCTACCCATTTTTAGGACTGGTTTAAAGTATACAAAATCACCCGGTTCTCATCAACCGATACTCCATTGGAGCGAGGTTGTTTAAGGAGT # Questionable array : NO Score: 5.60 # Score Detail : 1:0, 2:3, 3:0, 4:0.84, 5:0, 6:-0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGTGAATTGCTTTCAGATTTTCTAGTTTTACTAGTGCAATGACAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:66.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-4.20,-3.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [1-10] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [60.0-65.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.78,0 Confidence: HIGH] # Array family : NA // Array 1 61647-58642 **** Predicted by CRISPRDetect 2.4 *** >NZ_QGDW01000015.1 Fibrobacter sp. UWB6 Ga0136278_115, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================================ ============================== ================== 61646 48 100.0 30 ................................................ TTGGCCCATGGAACTTGAAGCTGAAGAAGA 61568 48 100.0 30 ................................................ ATGGCGGCATCGTCGAGCGCGAGGTCCGAA 61490 48 100.0 30 ................................................ CAACGCCGCCCTCGTTCACTAGACTATTGA 61412 48 100.0 30 ................................................ ATGCCGTTTCGCTCTCCCTTCAATCCGAGC 61334 48 100.0 30 ................................................ CATACATTGACTACTACACCGCTGTTCACT 61256 48 100.0 30 ................................................ ATTACAGGCCACCACAGCCCCGTTTGAGCG 61178 48 100.0 30 ................................................ AGGCAACCACTAACAATGCAATCGTCTTGG 61100 48 100.0 30 ................................................ CTGTTGTGGGTACAATACAGAAAGTCGTCA 61022 48 100.0 30 ................................................ CTTCGTAAGACCAGCTAAATCTGTTTTAAG 60944 48 100.0 30 ................................................ GCAAAACGACTTCGTAAGACAGACCGAGCG 60866 48 100.0 30 ................................................ AAATGTTCGAGGCACTTGCAAACGGGAAAA 60788 48 100.0 30 ................................................ GTTCGTGTTCTTTGCTCGAATATTACGTTA 60710 48 100.0 29 ................................................ GCGAGGCGGAGAAGACGTCCAAGACTGTA 60633 48 100.0 30 ................................................ AGCCATCTTCATCTTGCGTGTAATGCAGCG 60555 48 100.0 30 ................................................ TTGTCATAACCGCACCCGCCAACCTTTCTA 60477 48 100.0 30 ................................................ CAATACCAGCAACACGCATTTCCTTGCCCA 60399 48 100.0 30 ................................................ AAGGCGGCAGCGTGGAAGTTTGCCAGGAAA 60321 48 100.0 30 ................................................ TGGATAGCGTACAACAGTACATCGATGTTT 60243 48 100.0 30 ................................................ CCGAAGTCGCAAATATCGGGGCACACCTCG 60165 48 100.0 29 ................................................ AATGGCTTACACATTGCGAAGTCCAGATG 60088 48 100.0 30 ................................................ AGCTTTTATTGGCATTATCGCTGATGCTTA 60010 48 100.0 30 ................................................ TTACGGGCTCCTGAGCCATCATACCCGCAA 59932 48 100.0 30 ................................................ TTACTTCAAGCAGAAAATCAACCTTCCTAC 59854 48 100.0 29 ................................................ TGAAAAAATCCATAAAATGACCTTAGAAT 59777 48 100.0 30 ................................................ ATTTGATACGAGGAATGATGAAGATGAACG 59699 48 100.0 29 ................................................ TTCCTTCGGCTTGATAAGGATGCCGTCGT 59622 48 100.0 30 ................................................ GAACTGAACCACCTTGCCGCCATTGTTGAA 59544 48 100.0 30 ................................................ GAGGTTTCTCATACTACGATGCGGACGAAG 59466 48 100.0 30 ................................................ GCAAGAGAAGCGAACGCATGAAACGTGTAA 59388 48 100.0 30 ................................................ TTTTTAGGAGATTTATATGCCGAAACAGAA 59310 48 100.0 30 ................................................ AAAATCCGTCAATGTTAAGCTTAATTCCGC 59232 48 100.0 30 ................................................ CTCTTGTCACTACAGGTGAGAAGTTCAATT 59154 48 100.0 29 ................................................ CATTCAAGAACGGAACTCTTACCTTGACA 59077 48 100.0 30 ................................................ TTTTTTCCGTATAAATACTAGGATAAACGT 58999 48 100.0 30 ................................................ CATAACCAAATACAATTATCATCAACCAAA 58921 48 100.0 29 ................................................ TTTAGTTTTATTGAATACAAACAAAGGAA 58844 48 100.0 29 ................................................ GCAGCCATTACGAGTATAAACACCAGTCA 58767 48 100.0 30 ................................................ CGTTCCCTGTCTTGTCCACCACGTTCACGT 58689 48 100.0 0 ................................................ | ========== ====== ====== ====== ================================================ ============================== ================== 39 48 100.0 30 GTTGTGAATTGCTTTCAGATTTTCTAGTTTTACTAGTGCAATGACAAC # Left flank : ATGGCTGTTCCTTTGCTACCAAAGGTAGCATTTTGACGCAGGCAGAATTGCCATTTGTCTAGTTATGAACAGTCCTAATTATGGGGAAGCTTACAAAAATGGGTAGCTGACACCAGTACCTGGC # Right flank : TGATTTGTTGTAACTGAATAAGTGTCAATGGGTTAGTTGCAGAATTGTGTAAAAGAAAAAATCGACTTTTCGAAGCCGATTTTTTCGTTTTTAGGGCATTTTTGTGATTAGAAAAGTTCTAGTTGAAGTGCTGGTTTGGGTAAGGGCTTTTCTTTTTTGCCGTAGAAAACCTGAATCTTCCCAAATTGTTTGTCGGTGATGCATAGAATGCTGACAGACCCTTTGGGAGGCATAAAACTCTTTATACGAGCGATGTGGACCTCTGCGTTTTCGACCGAGGCGCAATGCCGAACATAAATGGATAATTGAAATCTTGAAAAGCCGTCTTTCAAGAGATTTTTTCGAAACAGCGAATGGCGTTGCCGTTCGATTTTTGTTTCTGTAGGTAGATCAAAGAAACATAGTATCCACATAATTCGATACTCGCTAAATCGATCCATCCTACACCTCAGGATAGATTAGTTTCTTTGTGACTCCCATATAGCATTTGGCGAGCGATG # Questionable array : NO Score: 5.76 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:-0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGTGAATTGCTTTCAGATTTTCTAGTTTTACTAGTGCAATGACAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:66.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-3.70,-4.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [70.0-55.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,0.37 Confidence: LOW] # Array family : NA //