Array 1 2069951-2070245 **** Predicted by CRISPRDetect 2.4 *** >NC_010003.1 Petrotoga mobilis SJ95, complete sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ====================================== ================== 2069951 30 100.0 35 .............................. CATGAAAGGGGGGAGGAACGTAAAATTTACTTATA 2070016 30 100.0 35 .............................. TGCTTTGCTCTGTTCGCATAAACCAGCTCACAAAG 2070081 30 100.0 37 .............................. TTTGTTTTTCATAAGCTTTCTGCCCAGCGTAACCCGC 2070148 30 100.0 38 .............................. GAGATATTGACAATGAGAATACAAATGTATATACAATA 2070216 30 86.7 0 .................A.........GTT | ========== ====== ====== ====== ============================== ====================================== ================== 5 30 97.3 36 CTTTTTATCCTACCTATGAGGAATGGAAAC # Left flank : AGGCTGTGTCACCTGCACCACTTGCGGATGGTCAAAGTGTTCTTAAATGATATACAATAAGAAACAATACTAGAATTTGGTTTTGAAACAGGGTATATGGTTTTATTAAAGTTTCATGGAACAAGCGGTATGGCACCTTTCGTTACAAATTAAAGCGATGTCGTGAAAGACAATTACCTTGTTGGAATAACTTTATAACCCGCCTTCATGGCGGGTTTTTTGATTTTATTAATTTTTTTGTTCACAGTTTTGATAAGTTGAACCGACTTAATATAAAATAATGTTAACAATTTAACCTAATAATAGCATAGAAAAGCAAATGATGAGAAAAATCGTCTGTCGACCTCCAATAGGGTAAAAATCCCGGGGGGATCGACAGACAAGCGAAAAAAGTCACAAGCCTTATTACATGAGTATTTGAATTGAATCTTAACAATTTCTCAAAGTTTTGCTTGACAATCGTAATTTTTTATGATATAGTATTTGTAAGTATCTTATGC # Right flank : TAGGGGAGAGGAATGGAAACGAGATTGCTTCAGAGCTTCGATGCAGTATGTTCTCGCTTTAAACGGATTTTGATGAATTGAAAGTGGGGGAGGAATGGAAACGAGTAGTTTATGTTGTATTCTACTCTCTTTAATAAATATCAAAAAATGTCCGTACCTATAAGAACCGTTGATATTTGTAGTAATAAGAATCTTCCTTGTCTTTCCTTAATGCTTCAGAAAAATCCTTATTTAGGTTTAGGGCACCTAGAATTCACCGTTTTCATTCGGAAATATTTGTTACCCAAATAAGAGTTATTTTAAGAGCTTCTTTCGACTTTTCCAAGTTTAGAATTCTCTAACCAAGGGTAGAGTCTTTTGAATAATTTAATTTTTATACAGGATCTTCTTAAAAAAACAACGGCCCCTCTTAGGAATGATAAAATAAAATTCCAAAAAAAATTCGCCTAGGGTATTTTTTTTGAAAATTCCGTCTGTTGCGTGGATGCAGAGGTATTATT # Questionable array : NO Score: 5.92 # Score Detail : 1:0, 2:3, 3:0, 4:0.86, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTTTTTATCCTACCTATGAGGAATGGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:63.33%AT] # Reference repeat match prediction: F [matched GTTTTTATCGTACCTATGAGGAATTGAAAC with 94% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-2.60,-2.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-4] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [75.0-53.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0 Confidence: HIGH] # Array family : I-B [Matched known repeat from this family], // Array 2 2082391-2085414 **** Predicted by CRISPRDetect 2.4 *** >NC_010003.1 Petrotoga mobilis SJ95, complete sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== =================================================================================== ================== 2082391 30 100.0 37 .............................. GATGGAAAAGAAAGAAAGACATCAAGAACGTTTGACC 2082458 30 100.0 36 .............................. CTCATCCACATAGTAGATTATTTGTTATGGATTATG 2082524 30 100.0 38 .............................. TTTTTTTCATGATAAAATCATCTCCTTTTTTAGTAAAA 2082592 30 100.0 37 .............................. GAAATAGTTACTATGGTGGACGTACTGAATTGATTGA 2082659 30 100.0 35 .............................. CTTCATATTTGTCTCCGAATGAATCAAAAAACACT 2082724 30 100.0 37 .............................. AGGGCGAAAAGGAAATCATGAAACGTATTGGTGAATT 2082791 30 100.0 38 .............................. AAGCAAGAAAAGGCGATAAAACTTCTAAAATATTCTAT 2082859 30 100.0 38 .............................. AACAATGAGGATATAGAATATTGTAGGCGTGATGTTGA 2082927 30 100.0 35 .............................. GATAATTGTATCCCTTCGGTACGATAAAAGAATAA 2082992 30 100.0 39 .............................. AATGAAGATGATAAAAGGATTTGGCATGGTGATAAAAGC 2083061 30 100.0 35 .............................. TTTTTTATAGAAAGTACACTGTACTTTCTAAGTCG 2083126 30 100.0 36 .............................. TCTAACAATTAACAACGAGCCAGCTCGAATGAAAAT 2083192 30 100.0 37 .............................. TGTGCATTCTTGACACCTTGGAAGTTTTCAGTTATTT 2083259 30 100.0 38 .............................. TTCAATTGGATACTTTCAAATATCTACGTGGAGGGGTG 2083327 30 100.0 37 .............................. CCCGTGCCGCTGACGTTGTATAACTTGAAAAAAGAAT 2083394 30 100.0 38 .............................. TGGGTTAAGAATGAGAGCACTTTAGAAGAGAGACCTGT 2083462 30 100.0 36 .............................. TTGTCTCAATAGGTTCTTTTGGTTGAGTCTGTCCTG 2083528 30 100.0 40 .............................. CTTCCTGAAAAACCGTGTCGGTTTTTCCGTGTCGGTTTTT 2083598 30 100.0 36 .............................. TTGAGGAACCTAAAAAAGAGGAGGCAAATAATAAAA 2083664 30 100.0 40 .............................. ATAATATAACTTCCATCACCATTTTCAATTATCTTTGCCA 2083734 30 100.0 36 .............................. ACCCGTCTCGCACGTCCGGCACTGTGATGCTGTATC 2083800 30 100.0 35 .............................. ACTTGTATACAGAAACAGAAGCAGACATAAAAACA 2083865 30 100.0 37 .............................. CGACACCAATTAGATCCATAACAGTTACCTCCTTAAG 2083932 30 100.0 39 .............................. CAAGGCGTTTGTTTCGGCTCCGTGTTTGCGGCTCCGTGC 2084001 30 100.0 39 .............................. ACCATGAATGAAACGCTTCTTTTGTCTTTCTTTGCTTCT 2084070 30 100.0 35 .............................. TCTAACTTCCTTCTTTCAACTTCTTTTTGTAACTT 2084135 30 100.0 37 .............................. CAAATACAGTATTCCCACAAGTAATAAGTAATAACAA 2084202 30 100.0 38 .............................. TCAATAATTTCACAATAATAATTTCTCAACAAATCATC 2084270 30 100.0 36 .............................. GTAGCTAAATTAGCAATTATAACTCCTTTTTCTTTT 2084336 30 100.0 36 .............................. ACTTTATTCAACATATCAACATTATTTTCTTTCTCA 2084402 30 100.0 37 .............................. CTCGATTTCTTCTATGTACATTTTTTCCGACAACTCG 2084469 30 100.0 36 .............................. TTTAGATTTTTGTGTTGATATTTGTGTAGATATTTA 2084535 30 100.0 38 .............................. TTATATCATCCTGTCTTCCTTCGTCTGTGATTTTCTCC 2084603 30 100.0 38 .............................. TTCTTATTTCTTTAACTATTTCTGGTTCTAATTGTTCA 2084671 30 100.0 41 .............................. CAAGAAATATCTCTTAGTTTTTTTTTTGAACCATATAGTAG 2084742 30 100.0 37 .............................. AAGTAAAAAAAAGAGATGATTTCTCACCTCTTTTTTC 2084809 30 100.0 37 .............................. GGTTCATTTAAACTAACAATCTTTGTATCTTCTTTTT 2084876 30 100.0 36 .............................. ATATGAAAAGTAAAGTGAATACTGCTAAAACGCCCC 2084942 30 100.0 35 .............................. TCTAAATCTGTGAATACTTTTACTTTTCCTTGAAG 2085007 30 96.7 37 .................A............ AGCCCCTGAGCTGAAGCTAACATACCCTCGGTGTACC 2085074 30 96.7 36 .................A............ TTTCCTTCACATATTGGTCTACTTCACCATGTATCC 2085140 30 96.7 36 .................A............ GCACTCTCCTCTAAAGCTCCTCTTTGAGCAGCTAAT 2085206 30 96.7 36 .................A............ GTATATACAGCATAACGCATTGCATCCATTGCATGG 2085272 30 90.0 83 ...........................GGG GGGTGGAGAGGAATGGAGGGTGAGGGAAAAAATGGAAACAATACAATCTTCAACTTCCGGGAATTTCAAGTAGTTCGCTTCCA 2085385 30 76.7 0 .......A..A.G..T...T........GG | ========== ====== ====== ====== ============================== =================================================================================== ================== 45 30 99.0 38 CTTTTTATCCTACCTATGAGGAATGGAAAC # Left flank : AAAGAAACATTATCAGAAAACTCTATTGTTTTATCCTTTTGATTTAAGCTGAATTTTCCGCTTAGCCTTGAAAAAGAAAACAATTTGTACTTTCTTTTATTATAGCTAAAACCCTCGTTATGAATGAAGTTTCTATATTCGGCATTATCTATTAAATCAAGAATGAAAGCTTGAATAATATGATTGTAATTTAATGGAAGTATTAAACTATTTAAAGAAAATTGAACGTTTAATCTCATTTCAATTCTCCCGATATTTTAAATTAAAAATTAGAATCTTTACTGTAATATATTTTATCATACGATAATAAAAAAAGCAAGAAGGTATAAAAAAATGTCTGTCGACCTCCAATAAGGTAAAAATCCCAGGGGATCGACAGACAAGTGTTAAAAGTCACAATCCTTATATTATGCATATTTGAGTTGATTTTTAACAATTTATCAAAATTTTGATTGACAATCGTAATTTTTTATGATATAGTATTTATAGGTATCTTATGC # Right flank : GAAGGGAAGTAAGGCTAGCGAACTTAAGCATTTTTTCTACTTCTTTTTGATCTAAAGGATAGAAAATAGGGTAAGAATTTGGACCTCATTTTAGATCATTCTTAAGCTTCTACGAAGTATCCCCTAAATTTTTAATCACACTTTAATTAATCGAAAATAGGAATGAAGTGGAGATTGATATCTCCCCTTTTGCTCTAAATAATGTAAGATGTAGATAAAACAGAAACTACATTATTTCTTAACTTGCTAGGTTCTATACTGTGCAGTCCAACCTTTTAGACAAGCTTTGATGAAGGTAAAGTAGAAACGAAAATAATGCCTGCAAACATGAGTTTTTTTCTCTTTTCTTTACTTTGAAAAAGATTACAAATAGAGGGGAATAAGGGAAGCGATATTATCTCTCAGCTTCCAAGTAATGCTTCCTTCCTTCTAACCTTATTTTAATGAACTGAAAGTAGGAAAGAAAAGATAACCTGTAAATGTGAGACTTTTTTTCTTCT # Questionable array : NO Score: 6.13 # Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:-0.07, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTTTTTATCCTACCTATGAGGAATGGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:63.33%AT] # Reference repeat match prediction: F [matched GTTTTTATCGTACCTATGAGGAATTGAAAC with 94% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-2.60,-2.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-10] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [78.3-66.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0 Confidence: HIGH] # Array family : I-B [Matched known repeat from this family], //