Array 1 437252-435834 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP018058.1 Geobacillus thermocatenulatus strain KCTC 3921 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ======================================= ================== 437251 30 100.0 35 .............................. CCTGCAAATGTTCGCGTTTCCTTTTATCGATCCTC 437186 30 100.0 35 .............................. CGATGTGCTGGATGCGTTTGAAAAGGCGGGTGCGC 437121 30 100.0 36 .............................. TCGCTGCAACCAACCGAATGGCACAAGCGACGATTC 437055 30 100.0 37 .............................. GGACTGTCGTTCGGTTTTTATCTTGTTTTGCTGCAAT 436988 30 100.0 35 .............................. TGGCTTTAATGTTGGTGTTGGTGTTGTTCACTACC 436923 30 100.0 39 .............................. ATGGGAAAGAAGTTCGTTTCAAGTCGAATGCGGCAACAC 436854 30 100.0 36 .............................. CTCTTCGATCGTGCGCAAACCTTGTGTGATAATGAC 436788 30 100.0 36 .............................. CAATGGGCTGACTGTGAATGGGGGCACGGCTAATGT 436722 30 100.0 37 .............................. ACCTATCTTTCTTTCCCGGTCGGTTCGGAACCCTGAC 436655 30 100.0 38 .............................. AATTCCTTGACGTTTCCCGTTGTCTTTTTCATACAAAC 436587 30 100.0 35 .............................. TATATAAGGTCCACATGTCGCGTCCCAGCCGCCGC 436522 30 100.0 34 .............................. TTCGGACCGGCTATGCTTGAATCCAAAGGCGTTT 436458 30 100.0 37 .............................. TGGCAATATGGTGCGATTCCAAAAGCTTGGGAAGACA 436391 30 100.0 35 .............................. CCAAATCTTCGTATTCTTCTGGCACTTCACACTTC 436326 30 100.0 34 .............................. TCGAGGAACACGACAGTATCAGCTCGGTCGAGTG 436262 30 100.0 37 .............................. TGGGGAACGGCTTTACAATCAATCTCGACGATAAGCC 436195 30 100.0 38 .............................. CTTGAAACGATTCTAACTGTTTGATGCGATATTCTTTC 436127 30 100.0 37 .............................. TCGAGCTGGCGATTCGTGCCGCAAAGCCGGGCGGTTA 436060 30 100.0 35 .............................. ATAGATGAAGCAGGGATTATGTTTAATTCTCGCGA 435995 30 100.0 35 .............................. TATGATTACTTTAAACATCGCAACCCAGAAGCATT 435930 30 100.0 38 .............................. GGTTGAACCGCTCTTTCTTCATGGTAGGTGTGTCTTTT 435862 29 90.0 0 ...................T.-.......G | ========== ====== ====== ====== ============================== ======================================= ================== 22 30 99.5 36 GTTTTTATCGTACCTATGAGGGATTGAAAC # Left flank : TGTTCTTGCATGAAGCCACTCTCCTTTGGTATAGCTGGCCCCGCCTTCATTATGCAGATGACCCGCCAAGCAGACGATTTAGATGTCGTCTCAAGTTTGCCTAGCACCAAAGGAATGGAACAGGGATTATAGCAAGCAAGGCGGAAAGAAGTAAAACAGGGGAGGAAAAAGGTCGTCAAAAAAGAATCGAGGGAAGGACGCTCGACGTGGCGAAGAGAATGCTGGTGAAGGACTGGAATATCGACGCTATCAACGAACTGACCGGACTGCTGGTTGAAAAAACAAACGAGTGAAGAAGCAAACCATTCTCCTCAACCTTATATTCCCATTGTCGTCGACCCCCAATCGCGCAAAAACCCCTGGGGATCGACGACAGTGGTTTCGGGCTCCCTAAACCTACAGCCATCGATGACGAACCTTATTGACAGAATTTTTGAAATCTGTTATTCTGAAAGCAGCGCTAGATCGAAATGTTTGATACAACAAGCATTTTTGGGGGG # Right flank : TCCGTTGTACCCTTTGCGAAGATTGATGATGTATGGCGAAGCGGCATCTGTTGTCTATGACCGCAGAGGCGTGGTGTCGCGCTTGCTTGACCCATTGATAGCGAATCCATTTGATAGAAAAGGACAACGCTCGATCACGAGGCGTGTTTCTGGCCGCCATGCTTCCCCGTCTGGCTTTCGAAGCATCAAAACAAAAAAAGACCCGCCCGCTTGTCTTGGCAAACGGACAGGCCTTTTCGTCGCGTTTTTCGTTTCCTCTTGCTCGACGCCTTGTCGATTACGCTCTTGCCATGCCGATCGAGGCGTCTGGCGTTTTGTAGGATGAAGCGTCGTTGTTTTCGTCTTGATGGTTGTCGCTTGGCGTCGTCGAATGGTCGTCAGCCGATGGTTGTTCATTCGCTGGGTTTTCGTCTGTCGGCGCTGTTTCGTCACTTGGGATCAATTCTTTTTCTTTGCTCGTGGCGGCGCGATCGCTTCCCGTTTTGTCTTCCGCTTTGTCG # Questionable array : NO Score: 9.23 # Score Detail : 1:0, 2:3, 3:3, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTTATCGTACCTATGAGGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:63.33%AT] # Reference repeat match prediction: R [matched GTTTTTATCGTACCTATGAGGAATTGAAAC with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-0.50,-1.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [3-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [53.3-58.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,9.78 Confidence: HIGH] # Array family : I-B [Matched known repeat from this family], // Array 2 523313-524149 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP018058.1 Geobacillus thermocatenulatus strain KCTC 3921 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ======================================= ================== 523313 30 100.0 37 .............................. AAGAACAAAACGAATTGTATGCACAAGGTCGCACGAA 523380 30 100.0 37 .............................. TGGCAATAGGTTTTTCCGCCGACGACTCCCCATCCGT 523447 30 100.0 39 .............................. GTATTGTGTTTCGCTGCAATTTGTGACAACGTATCGCCT 523516 30 100.0 36 .............................. GACGGCATCTGAACCACCTCTCTTTGACTAAAAAAT 523582 30 100.0 39 .............................. GTAGGTGGAGGATGAGAGGATGCAGACTCCGGCTGTCCA 523651 30 100.0 35 .............................. TCAACCCCACAGTCTGTCTAAAAAGTCATCGGTCG 523716 30 100.0 35 .............................. TATTCTCTCGCTGTCTTGGCGATTGGCTGGCTTCC 523781 30 100.0 39 .............................. GCTACATTTGAAAGCTCTTGAGTAATTTTCAACTTGTTT 523850 30 100.0 35 .............................. TATTCTCTCGCTGTCTTGGCGATTGGCTGGCTTCC 523915 30 100.0 39 .............................. GCTACATTTGAAAGCTCTTGAGTAATTTTCAACTTGTTT 523984 30 100.0 39 .............................. GCTGCATTTGAAAGCTCTTGAGTAATTTTCAACTTGTTT 524053 30 100.0 37 .............................. TATCCGCTCATTGATGACCCACATTCCGGACATTTGA 524120 30 93.3 0 ...............G....A......... | ========== ====== ====== ====== ============================== ======================================= ================== 13 30 99.5 37 GTTTTTATCGTACCTATGAGGGATTGAAAC # Left flank : AAATCACCCAGATTGTGATGGGGATGTCTGCTCGGACGAGATGGGAGGAAATATGGAAAGGATCGCTCATTAATGTAATTATGCAGCAACTTAAACATGTTGATGTGCTTGTTGTATCTGACAGATAGAGAAGAGGGGCATCTTTGATCATAGTTCCAAAAGAAGACTCCCGTTCGCAATTCAAGCAATAAGCGGAAGATGAATGTCGGCTGGCGCCAGCCAAAACGTATGATAAAATCAATGTGCATTGCGTACAGGCTGTTGACGGACTTAAGCGGCTAAGCAGCGCACGAGACGAGAGGAAATTCAAAGTGCACGCTGTGCATAGCATTGTCGTCGACCTCCAATCGTGCAAAAACCCCGGGGGATCGACGACAATCTTTTTACACACTTCAAGCCTACAGCCATCGTACATGAACACGATTGACAGAATTTTTGGATTATGGTATTCTGAAAATAACTTTGGAGCAAAAAGATTGATATATCAAGTGCTTTCTGGG # Right flank : CCTTCGTGTTTTGTGCGAACGATCGTCGCAATAAACGCTTTTCATCACACCGTAAGCAACTCCATGGAGCGCACATAGGTTTAAATCTGTGCGGTGGAGAGAGGTTAAGAGTTGGCGAAGATGACTGAAAGAGATGAATCAGCATTCGCGGGCTATGTCTGTGCGATACCGGCGATCCGCTTCTGCCGTTTGTTTTAGGCAGGAGTTTTTTATTGTTATACAGCCGCTTTATGTCCATCCCGAATTGTCGTTCCAGGAAGAGAAAACGGCGCAATTTGTGTACGAGACGCTGCAATCATTCGGCCATCTTGAGTTGTCGCGGCCGACGAAAACGAGCGTCATGGCGCGGCTCATTGGCCAACAGCCAGGCCGGGTCGTCGCCATTCGCGCTGATATGGACGCATTGCCGATTCAAGAGGAAAACACGTTTGAGTTTGCCTCAAAAAACCCAGGCGTGATGCATGCGTGCGGACATGACGGCCATACGGCGATGCTTCTCG # Questionable array : NO Score: 9.23 # Score Detail : 1:0, 2:3, 3:3, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTTATCGTACCTATGAGGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:63.33%AT] # Reference repeat match prediction: F [matched GTTTTTATCGTACCTATGAGGAATTGAAAC with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-1.40,-0.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [68.3-55.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [10.05,0 Confidence: HIGH] # Array family : I-B [Matched known repeat from this family], // Array 3 1391298-1396002 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP018058.1 Geobacillus thermocatenulatus strain KCTC 3921 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ======================================== ================== 1391298 37 100.0 37 ..................................... TATATCACACAGCTTCTTAGTATCATCGACAACACGT 1391372 37 100.0 34 ..................................... CAAAAGACCAAAACGGGACACCGGATACAGGTGA 1391443 37 100.0 34 ..................................... AAAAAGAGATCGAGCGCACAAAAAAGGGCCGCAA 1391514 37 100.0 36 ..................................... TTTGAGCGTTTTGCCTTTATGCTTCCCGAACGTCAA 1391587 37 100.0 33 ..................................... TAGTAACACCCCGGCACTACATACAGAGGACAA 1391657 37 100.0 34 ..................................... ATAGGAACCTCGCGAAAAATCAGCAACCGTTCGC 1391728 37 100.0 35 ..................................... TTCTTTCAATGCGTGTTGCGAAATGGTGGGCGACG 1391800 37 100.0 35 ..................................... TCATGGTGGGGGAGCTCCCCCACACCCCCCGTCGC 1391872 37 100.0 34 ..................................... TCGACAACTCTCCATGCACGCTCTAACGTCTTAA 1391943 37 100.0 36 ..................................... TAAACTTCCTGCTGACTTTATGTCTGCCGCTGTAAC 1392016 37 100.0 35 ..................................... AGTTTCCGCAGTGGAATTTGGATCAACCCAATCGC 1392088 37 100.0 38 ..................................... ACAATTGCGCCGATGGATTTGCCTAAAAACCTGTCAAC 1392163 37 100.0 36 ..................................... AGATGCTACTAGGCGTGACAAGTGAGTACGAGGTCA 1392236 37 100.0 35 ..................................... AGAGCGAATGAAATCTTGCATGTCCTCGATGTCCT 1392308 37 100.0 35 ..................................... ATATCATCGTAAGCGACAGGTGAAACGCCTTGAAT 1392380 37 100.0 40 ..................................... CGTGAGCACGGCCGGCATCTTCGTCTCGCGCAGTACAGCA 1392457 37 100.0 34 ..................................... TCTTAAGTTTAATGTTTGCCCTGATGGACATGAG 1392528 37 100.0 34 ..................................... CTTTCAACACCTCAACTGCCTGTGTCAGCCGATC 1392599 37 100.0 34 ..................................... ACGACGAGCATTGAAGCAGTCAATCGTAAATTAC 1392670 37 100.0 35 ..................................... ACGACGAGCATTGAAGCAGTCAATCGTAAATTACG 1392742 37 100.0 35 ..................................... ACGACGAGCATTGAAGCAGTCAATCGTAAATTACG 1392814 37 100.0 34 ..................................... ATGGATAGAACGGAAATACCGTCGGACTACGTAG 1392885 37 100.0 35 ..................................... ACGACGATTAAGGTCGGAGCAACAAACATCGACGC 1392957 37 100.0 34 ..................................... ATCTTTTACCTTTTCCAACTGAATGTGCGTTCCT 1393028 37 100.0 35 ..................................... AAAAGAAAATCCATCACTCATCAACCACCCTTCGC 1393100 37 100.0 36 ..................................... TTCCAGGCTTTGCTTCATCTTGACCGCCAGTAATGC 1393173 37 100.0 33 ..................................... CGAATTACGTCGCTGGGGGCTTCCGTGGCGCCA 1393243 37 100.0 36 ..................................... ATGAAATCAACTCCTTCAACTGCAAGCGCGAATTTC 1393316 37 100.0 36 ..................................... TCATAAAAAACAACATTTAAGCGAGATTCCGGCGAA 1393389 37 100.0 34 ..................................... AGTCAAAAAATTTTTTAGCGCCTTTGGCGCGGCG 1393460 37 100.0 35 ..................................... TAGCATCCACCGTGTTTATATGCTCCACAATCCGC 1393532 37 100.0 35 ..................................... GTGAATCGGGAAGCGTGGAGCAAGACGCGGATCTC 1393604 37 100.0 38 ..................................... TTGTTGTTGCTCCCGTAAATCAGCGATAGTAGGAGGAA 1393679 37 100.0 36 ..................................... AGATTAACGGAATGCAAGAACTGTTACGTCAGCTTG 1393752 37 100.0 35 ..................................... TGATTTAGGTGTAGCGTAAATTTCATGCCCCAGCT 1393824 37 100.0 33 ..................................... TCCAGAATGGCAACGAATGAGGGAGTACATCTA 1393894 37 100.0 34 ..................................... AATCTGAGTAGATATGAGCATCAGTTAGTCGCTG 1393965 37 100.0 34 ..................................... TACAAATTGGCGTTTATTTTGAGGATAGAGGTTT 1394036 37 100.0 35 ..................................... AACCATTTTCGGTACAGAAGCCGCAAGCGGCATGC 1394108 37 100.0 36 ..................................... ACGGCTCATTTCGCTTGTATTTGCAAAAACAACAGC 1394181 37 100.0 33 ..................................... ATTCTTTGAAAGACTTTCGAGTAACAAAATCGC 1394251 37 100.0 33 ..................................... AAAAATGCCAGCTGGCAAGCGAAAACCACGCAT 1394321 37 100.0 33 ..................................... TGTTCCTCTTGCGTCGGCTGGGATGCGTCTGCA 1394391 37 100.0 33 ..................................... AAAAATGCCAGCTGGCAAGCGAAAACCACGCAT 1394461 37 100.0 36 ..................................... CGGGTCTGGGTTCACAATAAAGTGCAGCACCTCGTC 1394534 37 100.0 33 ..................................... ATTTCCCTCCTTGTTTTTCTTCGAGGCTTCAAG 1394604 37 100.0 36 ..................................... GCGAACTCAATAGCGTTGATTTAACGGATTTCCAAC 1394677 37 100.0 39 ..................................... CGCAAAACACCATTTTCGACCCGATTGCCAAGCGAGTGG 1394753 37 100.0 35 ..................................... GATTAAGAACTTTTTAAACTCGGGGCGAACCAGTA 1394825 37 100.0 33 ..................................... GTACAATCGCCGAGCAAAACGAATTATACGCGC 1394895 37 100.0 34 ..................................... CTGTCGCGGCCCCTAGTTCCTCAAGGGAGATGCG 1394966 37 100.0 35 ..................................... ATTTTTTGGAGGCCGTTTATTGTATTTTTGCGAAA 1395038 37 100.0 35 ..................................... ACACCTTCTTTCAGACTGTAATATAGGCGCATAAC 1395110 37 100.0 35 ..................................... AAAACATCCCAAACCGTTTTATCATATAAGTTGAT 1395182 37 100.0 33 ..................................... CTCCTAATCGCCCCACGCACTCGCTTGTACGTG 1395252 37 100.0 34 ..................................... TTTGCATGCACCCACATATACTCATCGCCGCGCC 1395323 37 100.0 34 ..................................... GAGCGCGTGTGCTGGCGATCCCGAGCAAAATATC 1395394 37 100.0 33 ..................................... GACCTCAACGGAAATGTATGGGAATGGGTGGAC 1395464 37 100.0 34 ..................................... AGGTTCAGAGCAAACACACCAGCACTCGCGCCAT 1395535 37 100.0 36 ..................................... AGACGGCTTCCGGTGGCTGTAACACGTGCGGATCGC 1395608 37 100.0 33 ..................................... TTGACAACCTATAAGTCACCATTCGGCAGACCA 1395678 37 100.0 36 ..................................... ACAAAAAAGAGCGCATGTTCATGAATTTCAGCTTGT 1395751 37 100.0 35 ..................................... CAGATGACATTATCACTCAATATCAAAACACCGAT 1395823 37 100.0 36 ..................................... AACTTTTTGCTATCTTAACAACAGACGGGCAAACAA 1395896 37 100.0 33 ..................................... GTTTCGCCCGGCTCGATCACGACGTCCTCGACC 1395966 37 100.0 0 ..................................... | ========== ====== ====== ====== ===================================== ======================================== ================== 66 37 100.0 35 GTTGCACCCGGCTATTAAGCCGGGTGAGGATTGAAAC # Left flank : CGATGTAGAAACATTAGAACCAAGCGGTCAAAAACGGTTGCGAAAAGTGGCGACCATTTGCCAAAATTTTGGCCAGCGGGTGCAAAAATCAGTGTTCGAATGCAGCGTCAGTCAAGCGCAACTAGAAGAAATGGAGCATCAATTGTTGCGCGTCATTGACTTGGAAAAAGATAGTTTGCGGATATATACATTGTACGGCAGCCGGTCAAAGGCGGTTCGTGTCTATGGAAAAGATTATTACGTTGATTATAATGATCCCATCATTTTGTAATGACAAAGATGACAAAATGCCGATGATATGTGCGGCAAGAAGAGAATGATGCGCGAACATAAAGCGATGCTGAAAAATAGGGGGGATCGCGATGGGCGGAAAAGCTGGTTATAAAGCCGAAGATGGGAAATGGATCAGTGATCATTGCAACTTTGATCCAAACGGAATGTGTAAGTTCGCGTTTTTATATCTTGAAATGCGCTCAACACAAGATATCTAAACGCGGGCG # Right flank : CCTATGCAGGATCCTAACTTTAATTTAAAAACTGTAGATGAGCATTTTTAATTACAATAATTTCCATGTTCTAAGAGACAAACAGGATACCCCTTAGGCCACATGGAGCTGTTTTTTGATCACATCAATGGGAATATCTTGCTTCGCGGCGTCATAAATGAACTCGACGACGCTGTGGCCTTTCCGCGATCGAAGAAGCTCCAGTCCAGCGGAAAGGGTTTGTCGGGATTCGGCGATGCTGTACACGCAGGAGAGCAGCACCACCGCCCAATACCGTTTCACCGCCCGAATGTGGCGAACGCGGTATCCATCCAGCTTCAGTTGATCTTTCGCCTGCCGGAAAAAGCATTCGATTGTCCAACGCTGGGCATAGTAACGCAAGATGTCTTCGTCCCCGAGCTCCCGGTCGGTGCTCAAGACGCAATGGAGATGTTCCGGTGTCATCGGCTGATCCGCCTTCCAAGCCAGCAACACCACCGCGTCATCGAGGCCATGGATCG # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:0, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGCACCCGGCTATTAAGCCGGGTGAGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: F [9,8] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-15.20,-15.40] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [58.3-75.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.87,0.27 Confidence: HIGH] # Array family : NA // Array 4 1397414-1397952 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP018058.1 Geobacillus thermocatenulatus strain KCTC 3921 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ===================================== ================== 1397414 37 100.0 34 ..................................... AAGATGTGGAGGACGATCAAGTTGATCTGGTGCA 1397485 37 100.0 34 ..................................... TCCGGCGTATTCGCAACTAACTCCGCAATTTTGC 1397556 37 100.0 34 ..................................... TCATTCGCCTTCGACGTTTCAACCCGCATTTCCC 1397627 37 100.0 35 ..................................... TGATATAAAAAACCTGATCGCAAAACGGGAAAAAC 1397699 37 100.0 34 ..................................... AAGTATGCGGCGCCGATCGCAAAAACTCTTGGTA 1397770 37 100.0 37 ..................................... ATAAGTATTGGAGAAATAGAGAAAATAGAATTAAAGA 1397844 37 100.0 35 ..................................... TTAACTTGGATGTGAATTTTACACGTTTGGATTTG 1397916 37 100.0 0 ..................................... | ========== ====== ====== ====== ===================================== ===================================== ================== 8 37 100.0 35 GTTGCACCCGGCTATTAAGCCGGGTGAGGATTGAAAC # Left flank : TTGCATGGCGTGCGTTGCCCGTGACGAAGGCTTCGTTTTTTGGCAAATCGTATCATCGATCGAAATGAAAAGGGGCTGATTCTTCCGTTTGGTTAGGCGTTCGACCCGGCAAAGGATCCACTCTTGAAGCTTCTCAAGCAGCCTTTCCTCGTTCCAAGGGCTTTTCGTGAAAAAGTGGCTCAACGTGGTTCGATGATTCGGATGAAAACTCCAGTGATGGACATCGGTCAACGTTCCCGAAAATCCCTTGGTGGTCAAGGCATCGACAATGTGAACGAGATGCTTCAAGACCGGTTTGGAAAGTTGCAGCGTCAACCCCAAAGTGAAGAAAAACTTGTAGATTCCTTGGTGATGTGCTAATCTATTCATGGGACATGAACCTCCTTGTGGGTAGTTGGTAGCACATCTATTCTAACCAAGGAGTCCGGTTCATGTCTCCTTTTTTGTTTGATTGTCAATTTATGTTAGCGAATTTGCTCATCTACAGTTAAAAATTTATT # Right flank : CAAATTTGGTCAGGCCAAGCAGGAATTTGCTCCTTGCTGTCGAATTTATGTTCATGAAAATTGTTGCTTCACCTTTTCTACATCTTCTTGAAACTTCTCATGTGTTTTCGCCAGCACTTCTTCAAAGACGCCGTTGAGCCGCTGCTCGAGGACGGCGATTCCTTCTCCGGTGATTCCGCCTTTGACGCACACTTTTTCCTGCAGTGTTGGCAATGTGTACACATTCCGCTTGAGCAGTTCCCCAAGACCGATGATCATATCGGTCGCCAGCATCGTCGCCTGTTCCTTCGTGATGGCGGTTTTGGCCGCTGCGGCGTCGATGAAGCGCTGCAGCAAATAGCTGAAAAACGCTGGACCGCAGCTTGAGATGTCGGAAGCGACGCGGGTGATGGCCTCATCGATATACACCGGCGAGGCGATGCGCCGGAGAAGATCATCGATCGTTTGCCGGCAGTCGGCCGAACTGCGTGCCCCGAAGGTGACGAGGATGCTGCCGGAGA # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:0, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGCACCCGGCTATTAAGCCGGGTGAGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: F [9,8] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-15.20,-15.40] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [76.7-61.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.14,0 Confidence: HIGH] # Array family : NA // Array 5 1825669-1827069 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP018058.1 Geobacillus thermocatenulatus strain KCTC 3921 chromosome, complete genome Array_Orientation: Unconfirmed Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ======================================= ================== 1825669 29 100.0 39 ............................. TACTGCTTCAGTTGTCACTGAATCGCGTTTTACCAGTCG 1825737 29 100.0 34 ............................. GCAAACAGGTTGATGTTGATTTTTGGCAGCGCAC 1825800 29 100.0 35 ............................. ATCGACCACCACACCCACTATTGACCGCCCCCTAA 1825864 29 100.0 38 ............................. GGATACCGTCTTGAGGCTTTATCTCGTGGTGTCACTTA 1825931 29 100.0 35 ............................. GGCGGTGAGCCGTTGAACAATCCTGATGATTTGTT 1825995 29 100.0 35 ............................. TGGAAATAAAGTATTTTGACACTGATGCCTTTTTC 1826059 29 100.0 36 ............................. AGGTTGCCGCGAGTTTGAGCAGTACACGAAAAAGGA 1826124 29 100.0 37 ............................. GATATGCAAGACGTATCAGCAACCCAACAATATCAGC 1826190 29 100.0 36 ............................. CAAGTTCGGTTTCGACTTTATTTTTGTCGCTCAGTC 1826255 29 100.0 38 ............................. TGTCATCATTGACGAGGCTGGCATCATGTTTAATAGTC 1826322 29 100.0 36 ............................. AGCGATGAGCGATCACAAAGATGCCGGCTGGATCAA 1826387 29 100.0 36 ............................. ATTCAACCCCAACTCAAGCGCATGATACGACTTACC 1826452 29 100.0 39 ............................. GATAGTCCGTTTCAGACACAAGATTTCAATGAGACTCTT 1826520 29 100.0 37 ............................. ACATCTTTCCGCCTCTCCCGTGAGACACTTGATATGT 1826586 29 100.0 35 ............................. CAGCCGCCTGTGCGCGGAGCTGGGCGATTTTGTTG 1826650 29 100.0 37 ............................. ATTTTTTTTCCAGTTCACTTAGGGGGGATGCATCTTG 1826716 29 100.0 38 ............................. GTGTAAACTTAAGCGGAACAGTCATGCCGGCAATATGA 1826783 29 100.0 36 ............................. TAAGAAAATCCCTGCGAACCTCTATTTCTATATTCC 1826848 29 100.0 36 ............................. TTTTTTGAATTGTAATAAATTCAACGTATATGCTGT 1826913 29 100.0 34 ............................. GAAACAATCCTAACGACAGGCGCCGCAAAAGCAG 1826976 29 100.0 36 ............................. TCAGTATTATGTGTTTGAGGAGCAGTTCGCCGAAAG 1827041 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= ======================================= ================== 22 29 100.0 36 GTTTAATCTGAACGGAGAGGGATTTAAAT # Left flank : GGATGAACGATATAAACCGTTGAAAGCGTGGTGGTGAACCATGTTTGTTATCATTACGTATGACGTAGCGGAGAAGCGGGTCAACAAAGTTTGCAAAAAATTAAAGGAATATCTCACTTGGACGCAAAATAGCGTATTTGAAGGGGAGATTTCGAAAAGTCTGCTGATGAAGTGCATGTATGAATTAGAGATGATCATCGATAAACAAGAAGACTCCATTTACTTATACGAAGTAGAAAACCCGAAGAATATAAAAAAGCGGGTATTTGGTCAGGAAAAGAATTTTGATGAGTTGTTCCTCTAAGCTTTAAGAATTTGCAGTGAACCGCATTTTAGAGGATGAATGGGAGAAATCTTGATTTATCAAGGGCAGTGCTTCATTATTTGCGTAACATTAAAAACACGATTATCACTTTACTGCAAAATACGGTATAATTGATGCGTAGGCATTAGCGTGAATTGCTTGCTACATCAATAAATATTATTTTGTAACTGATAGG # Right flank : TTGAAAGTCGATGTTGCTGAATTGGAGAAAAAATTGGCGTTTAACTCACATTTCGCACCCTCCCGACGAAAATCGGGAGGATTTTTTCATCCCGATGTCGAATAGGTCCTTGGTACACAAGGAAAGCAAAGGAGTTTCCACACCATGGACGTTCGAATTCATGCTATTTATGAAAGTTCCTATTTGAATATAATAAGTGCCATCTTCAAGGATCTTGGCCTCCCCCAGCTGATTGACCGGCTGGTTCCGGTGGATCCCCAATGCCACACCCGAGCCAGCGATGTGGTCTGGCTGCTCATCCTGGATATCTTAAGCGGCCGTCAAGCGCTGGTTCATTTGGAACGATGGGCGCATGAAATCGATTTGCCCAAGCTGATCCGGCCGGAGCTCCAGCCTTCTTGGTTCAATGACGATGCCATCGCCCGCCATCTGGATCGCCTCTATGATGCCAACATCCATCAAGTCATTTCGGCTTGCCTTGTGCAGATCTACAAGAAGGA # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTAATCTGAACGGAGAGGGATTTAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:65.52%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.90,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [65.0-60.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: NA [0,0 Confidence: NA] # Array family : NA // Array 6 1829000-1831965 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP018058.1 Geobacillus thermocatenulatus strain KCTC 3921 chromosome, complete genome Array_Orientation: Unconfirmed Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ======================================== ================== 1829000 28 100.0 36 ............................ TTAAACAAGGCGAGATGCTAGACGGCACACCGTTGC 1829064 28 100.0 37 ............................ TGACGATATTTTAGCTGAGATGCTCGGCTGGGAAGTC 1829129 28 100.0 40 ............................ TGCTATCGAAAAGCACCGAAAAAATGAGCAACGCCCAAAA 1829197 28 100.0 38 ............................ TTAAACACAACTATTGTCTATCCTACACAAACATGATC 1829263 28 100.0 35 ............................ TCATGTCTGTCTTGGAAGAAAACAGCGCTGCGTTC 1829326 28 100.0 40 ............................ TATGAAGAAACAAAAGAACTTATACAAGCAGGAAATTATA 1829394 28 100.0 40 ............................ TATGAAGAAACAAAAGAACTTATACAAGCAGGAAATTATA 1829462 28 100.0 37 ............................ TTTCAGCTTTTTGGAATGAGTTTAATTCGTTGAATGT 1829527 28 100.0 37 ............................ TGTCACTAGCGTAAACGGAAAAACAGGCGCTATCACA 1829592 28 100.0 39 ............................ TTTCTCATAACGATCGCAATATCGATTCCTTTTTCCTTC 1829659 28 100.0 36 ............................ TCCATCCTGACGACATCACAGAGGTTGTCGTCGATA 1829723 28 100.0 38 ............................ TCAAGATATAGTTTAGATGGGCGCCCGTACGAATTTTC 1829789 28 100.0 39 ............................ TCTTCAGATGGCGTTGGTGCAGTTGAATAGAAATGCAGA 1829856 28 100.0 36 ............................ TTGTATTGTGACGCCTATGCTAACTATGTTAAGTGC 1829920 28 100.0 37 ............................ TATCCAGAAGGGATTGAAAATATTCGCGCCAAGCTCA 1829985 28 100.0 37 ............................ TGACCGTTTCTTCAGCCAGCTTTTGAAGAAAACAAAG 1830050 28 100.0 36 ............................ TGGACGTCGCGAAATCGGGATCACTTCAGCAGTATT 1830114 28 100.0 37 ............................ TTTCTCCTTTGCGTCTCGATGGCACCGTTGTTCCTCC 1830179 28 100.0 38 ............................ TAGAAGGGCGAGCGTCCCTCGAGGATGATGCCGACAAG 1830245 28 100.0 37 ............................ TTGTAATACCACTCCTTCACAACAATGCTCGTAATTC 1830310 28 100.0 36 ............................ TATTAAGCTGCTTATAGGTACATTTAGCGCAGATGC 1830374 28 100.0 39 ............................ TATTCATAAAGTCGGTTTGTAACTATTACGAAGAGAAAA 1830441 28 100.0 38 ............................ TTTCGCAAAGCTCTATGACTTTCTCTAGCTTCTCGTTT 1830507 28 100.0 38 ............................ TTGACAAACGCGTGAACGTTCTTTCTCTTCTCCTCTAA 1830573 28 100.0 38 ............................ TGATGAAACCGCCAAAAACGTTTTTAAAGGACACTTTT 1830639 28 100.0 39 ............................ TTGAACTAGACCGGCTTTCATAATCGAAAGGCAGTCATT 1830706 28 100.0 36 ............................ CATGGGACATCGTACATATGACACATTATCCGATCT 1830770 28 100.0 39 ............................ CAGTTCATTCGCTATGAAACAAAGACTTTTAACATGCGC 1830837 28 100.0 36 ............................ CACAATTTGATTGCCTTGTACAATAACACCTTTAGC 1830901 28 100.0 36 ............................ CAGCGACACGGCCAATGACATTTGAGGAGCATATGG 1830965 28 100.0 39 ............................ CGGACATGCAATACACGTTCAAGTATGCGGCGCCGATTG 1831032 28 100.0 36 ............................ CACATGATTCTCGCAAAACCGGGTTTGGTGGGAATA 1831096 28 100.0 36 ............................ CAGACTTCGCACGCTCTACCGTTGCATCCGGCGCGA 1831160 28 100.0 36 ............................ CTGGGTTGCCTCTCGCTATGACACAATGAGGATCTT 1831224 28 100.0 38 ............................ CTTGTTACGAAACGAGGTATTCCGTATTTTTGCGACTA 1831290 28 100.0 37 ............................ CTGGTCGCGATCAACTAAACGATAACCGGGCGGAATC 1831355 28 100.0 39 ............................ CTGCTCTCTAAATGGGGTATCCTCTCGATCGAAATGCAA 1831422 28 100.0 36 ............................ CAGGCTGTTGCGGTCAAGAACAGATGGCCGGGAGTA 1831486 28 100.0 37 ............................ CATAAAAACTAACTCTCTTTCAGTTCTTAACATTTAC 1831551 28 100.0 37 ............................ CAAAGAAGCACATCATCTAACGTAATGACACGATTGG 1831616 28 100.0 37 ............................ CAATGCTCATATGGCTATTCTAGCGTACACCGGATCA 1831681 28 100.0 36 ............................ CACAGATAGTGATGCGAATGAATTCGCGAAAGCAAA 1831745 28 100.0 37 ............................ CTCGAATGGGTTACGAGGGATTTTTTCGAGTTTTACC 1831810 28 100.0 36 ............................ CTCATGCATCCAATCCCGAGAATTAAACATAATACC 1831874 28 100.0 36 ............................ CAGTCCTCCCAACTTGCGTTCATATCGATTTCTTGC 1831938 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ======================================== ================== 46 28 100.0 37 GTTTAATCTGAACGGAGAGGGATTTAAA # Left flank : AAAGGGCAGATCTCGGTGGAAATGAACTTCTCCTTCCTGAAAGATCCGTTCTTTACGGACGAGATTTACGTGAAAAAACCGGAACGAGTGGCGGTGTTGGGCTATTTGTTTCTCCTCGCATTGGCCATTTACCGCGTCTTCCAGCGCCGGGTGCGTCAGTTTATTACGCCGGAGCGCCCGTTAAAGGGCGTAGGGGGCCGCAAGCTGACCCGTCCGACCGGGCAGGCGATTTTTCAGTTGTTCTGGTATGTGAAAGTCGTCCTGTTGGAGCTGCCGGATGGGCAAATCCAACGCGCGTTAGGTCAACCGCTCACCTACGAGCAGCGAAGGATTCTGCAAGAGTTGGGAATGGACGAAAGCATTTATGTCTAATCTCATAAGGAATGATGAGCGATGGTAAAAAAAGGATTGCCATCGCTTGTTGTGTTGGCTCAAAAAATATTTTAAAAAAATGAATAAAAAATCCTTTGTTTCTGCACTGCTGGGGTGCGAAATGTGAG # Right flank : ATCATATACTGTAGATGAGCAAATTCGCTAACATAAATTGACAATCAAACAAAAAAGGAGACATGAACCGGACTCCTTGGTTAGAATAGATGTGCTACCAACTACCCACAAGGAGGTTCATGTCCCATGAATAGATTAGCACATCACCAAGGAATCGACAAGTTTTTCTTCACTTTGGGGTTGACGCTGCAACTTTCCAAACCGGTCTTGAAGCATCTCGTTCACATTGTCGATGCCTTGACCACCAAGGGATTTTCGGGAACGTTGACCGATGTCCATCACTGGAGTTTTCATCCGAATCATCGAACCACGTTGAGCCACTTTTTCACGAAAAGCCCTTGGAACGAGGAAAGGCTGCTTGAGAAGCTTCAAGAGTGGATCCTTTGCCGGGTCGAACGCCTAACCAAACGGAAGAATCAGCCCCTTTTCATTTCGATCGATGATACGATTTGCCAAAAAACGAAGCCTTCGTCACGGGCAACGCACGCCATGCAAGGGTG # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTAATCTGAACGGAGAGGGATTTAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:64.29%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.90,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [66.7-70.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: NA [0,0 Confidence: NA] # Array family : NA // Array 7 1835910-1836133 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP018058.1 Geobacillus thermocatenulatus strain KCTC 3921 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ====================================== ================== 1835910 28 100.0 38 ............................ TTGATCAAGTGTTTTATATCATTGATCGGGCGGTGATG 1835976 28 100.0 37 ............................ TTGCTGTCGCGGCTTGTGTCGTACTAGTGCTTGTAAC 1836041 28 100.0 37 ............................ GGGCGCTCAATGTGTTCCGTATGGAGCTGTTGGGAGC 1836106 28 89.3 0 ....G...................AC.. | ========== ====== ====== ====== ============================ ====================================== ================== 4 28 97.3 38 GTTTAATCTGAACGGAGAGGGATTTAAA # Left flank : ACCTCGCCACAGCGCTCGGCATCCAGGCGTGCCAACAAGGCCATGAGGTTCGGTTTTTCCGCGTCGCGGATCTCGTCGCCGTGCTGGAAGAGGCATTGAAAAATGGCACGCTCGGGCGGCTGAAACGAAGCATCGATGCGTGCGAACTGTTGATATTGGATGAACTCGGCTATGTGCCGTTTCAAAAGCAAGGATCGGAGCTGTTGTTTCATATTATCGCCGACTGTTATGAGCGAAAAAGCGTCATCGTGACGTCGAATCTGGAATTTGGACAGTGGAATCGGGTGTTTGGGGACAACCGCTTGACAGCTGCGCTGGTGGATCGCTTGGTTCACCATGCCCACATCCTGGCCTTTACGGGAGAGAGCTATCGACTGCGGAACGCTCTCTCCGCGATCCAGCCGTCCTCTTCCCCCGGTCTAGAACCTTAAGTCTTGAGCTGGCAAGCCTATGTATTTTTTCTTGCACTTCTCTGCATTTTTTGCTTGCAAAAAACATAC # Right flank : AGGCCGCTTGTTTGCAGCGGCCTTAGTTGAGCACTCCAATGAGCGCATCCTTGGTATCACAGTGAGGCGCTAACTAATCGCCACTCCTGCACTCGCATATCCCGTGACGGAAGCGGCAATCGAAAGGCCGGAAGTGGTGGTGAAAAACGCCATGAGCAGCCGGTCGCCAGCATTGACAGGCACGTTTAATCCTGTGACGATGCCGCTGGCGTTTTGGGCTAGGGAGATGGGAAAGGTGATTGATGGCGTTAATGTAATGAGCGTGCCTGGAATAGGCGAAAATACGTTGCTGGACGGAGAAGTGGCGATATACAATTGGGCGCGGATCGTAGCCGTTCCTAAAAGCGCTGTGCCCGCTGTGGCGGAAAAATTCGCTGCGATAGCAGTAATGATCCCTGAACGCGGGATGGTAAAGGAAAAATTCGATATCCCGCCAAGGTTTATGGTTCCTCCCACTAAACTGATGCTTGAAGCAGCATTTCCAAATCCGATCAAACTTG # Questionable array : NO Score: 5.72 # Score Detail : 1:0, 2:3, 3:0, 4:0.86, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTAATCTGAACGGAGAGGGATTTAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:64.29%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.90,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [65.0-45.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.68,0 Confidence: HIGH] # Array family : NA // Array 8 1987779-1991389 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP018058.1 Geobacillus thermocatenulatus strain KCTC 3921 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ========================================= ================== 1987779 30 100.0 35 .............................. TTTTTTGTGTAAAAAAAGCGGAGCTATCACTCCGC 1987844 30 100.0 37 .............................. CATCAAACTGGGAAAACCAAAAAAGCGTTACTTGATA 1987911 30 100.0 38 .............................. CAAAAATATATTACAATAATCATGAAATAAAAGAAAAG 1987979 30 100.0 40 .............................. ATGTAAAACATGCCCCCTATATGCTTTTCAATTGCCCTGA 1988049 30 100.0 35 .............................. TAATTTTATTATTCCCAACCTGCCAACCGTTTCCG 1988114 30 100.0 36 .............................. ATTTTTTCACGTCTGAATATCCAATTAGCTTCATGT 1988180 30 100.0 35 .............................. CAATGCAAGCCATTTCGCTATTTTCTGCGTTGTTA 1988245 30 100.0 34 .............................. TTGTAGTATCAGACAGCGGCGCTGAACCGCTGGC 1988309 30 100.0 36 .............................. AAAGTTCAATACCAGCACCAAGGCGCAATAGCTTTG 1988375 30 100.0 36 .............................. ATAATTGCGCCTCCGCCTCGATTTCTTCCCGTGTGT 1988441 30 100.0 35 .............................. GTAAAGGCACACTCTCGGCAGGCGGAAGTGAAGTG 1988506 30 100.0 35 .............................. GTAAAGGCACACTCTCGGCAGGCGGAAGTGAAGTG 1988571 30 100.0 37 .............................. AGAGATCCATCCAGCAATTTGCTCCTCATCTACTCCA 1988638 30 100.0 36 .............................. TAATATTCAAAATCTTCTGCTGCCACGATGAAACTG 1988704 30 100.0 34 .............................. ATTTTTTCGTTCCGAATCTTTTTGGCGACTTCGG 1988768 30 100.0 35 .............................. CCGCAAGGGAATGGTAAACTCCCGCCGCGACGGCC 1988833 30 100.0 36 .............................. GATATTATTTTTGAGGGGTATAACGCGTTTAAGACT 1988899 30 100.0 35 .............................. TGGGGTCATGGTTTCGTGCATATAAGAGCGATAGA 1988964 30 100.0 35 .............................. TTTTGTTAATGGTGCTTATGTTTTTAGGGCTGTGA 1989029 30 100.0 35 .............................. CCTCGTCTATTTCCTGCTCAACAAAGCCATCACGC 1989094 30 100.0 38 .............................. AGTCCGATCAGGTTGTCCAAGTCGAGCTCAATGACAGC 1989162 30 100.0 36 .............................. CCGAAAAGATTTGATAATCCTTCACCGCTACGACAA 1989228 30 100.0 36 .............................. TCGCGTGTCGCAAGTTGATTCCGATTTCGGTACGGT 1989294 30 100.0 36 .............................. TCCTTCTCTCTTTAAGGACTCGCTGGCGTCCTTTCT 1989360 30 100.0 36 .............................. ACACACCGAGGGAACAGGCATGACACAAGATATTCC 1989426 30 100.0 34 .............................. CTTCAGCAAGTTCTTGTTGATACTGTGTCACAAG 1989490 30 100.0 38 .............................. ACTGTTGCGATGACGCGCTTCTTGTCGTCAATAATCTT 1989558 30 100.0 39 .............................. TGACGAATGGTCGATCCCATGCGCTCGCTCAACGGTTTA 1989627 30 100.0 36 .............................. ATTTTTCGTCAAATGTTATTTTTTTGTAGATTACTT 1989693 30 100.0 38 .............................. TCGAGAATTGCGAGTTGAGCGAAGAAATCGCGAGCTTA 1989761 30 100.0 37 .............................. CGTTGGTCGGAGGCGGCATATTGATTATTCTTTATGC 1989828 30 100.0 35 .............................. TAAAATAAGATACCTGCAATTCCACACATAGGCTT 1989893 30 100.0 34 .............................. TGACGATCACTTTCCCACCGTCAACCGCTATGAC 1989957 30 100.0 36 .............................. TCCCAGCGCACGCTCGGATTCATCACGCGCGGAACA 1990023 30 100.0 35 .............................. ACAGCTCGAACGCTTTCTCTGACACGTTGCATTCC 1990088 30 100.0 38 .............................. TCGCTTGACTGACGTTGCCGTTGAAAATATATGACTCG 1990156 30 100.0 34 .............................. CCAGCCTAAATCGCGACTTGGCCTATTATGTTGG T [1990168] 1990221 30 100.0 39 .............................. AAAAGTGAAGCACATCGGATAGCTCCTCAAAATAGCTGC 1990290 30 100.0 35 .............................. ATTCCAACAAAAACACGGCGTATTGCTCCCATGTC 1990355 30 100.0 35 .............................. TTTTTCTATCGCCGGTCTCAATATAACCGCTTTTC 1990420 30 100.0 37 .............................. TATAACACTTTTGCATATGTAGATGTCATGGTGATCG 1990487 30 100.0 34 .............................. TATTCATAAAGAGCTTTTACTTCATTCATATTAA 1990551 30 100.0 36 .............................. AGTTTTGTTCCCGTCTTCTCGATCCCTCCCGAGTTT 1990617 30 100.0 36 .............................. GCGCTAATCGCCGATAAACTATTAACGTTCAGCTTA 1990683 30 100.0 39 .............................. TTGTGCAATTTGTTGTAATTCAGTAATTACATTTCGCCA 1990752 30 100.0 37 .............................. CATCGAATGGTTAGAAAGAAATGACAAAGGCGCTATG 1990819 30 100.0 36 .............................. GTTTCCATATTTCTCAACCAGAGAGCGAATCGAATC 1990885 30 100.0 36 .............................. AACCGCGTCATCCCCGACGCGGCGGCGGGATAGAGG 1990951 30 100.0 39 .............................. TTCACCAAAAGACAAGACAACGAACAACGAGCGGGTTGT 1991020 30 100.0 36 .............................. GTTTACGCCGTAATATCGCTCTCCCATGTATTTCGA 1991086 30 96.7 37 .................A............ TCTTGGAACTGTGGCAAAAAGCATTAGTTGCCGCAAC 1991153 30 100.0 40 .............................. CGTATAACCCATATAAATACAGTAGCTTTGTAACGTATGA 1991223 30 100.0 36 .............................. TATTTTTCATTCAAACGAATAAAATGAAAAACATTA 1991289 30 100.0 41 .............................. ACACATCTGTTCAACAGTTAAATCACGTGGTACAGGAATAC 1991360 29 83.3 0 A...........T..G...-...C...... | A [1991376] ========== ====== ====== ====== ============================== ========================================= ================== 55 30 99.6 36 GTTTTTATCGTACCTATGAGGGATTGAAAC # Left flank : TGAATCCGGCGCTGTCCGACGACATCATCCGCGTCGCCCGCTCGCCGATCCGCAAACTTGGACCGAACGACCGCCTCGTCGCGCCAGCCGTGCAATATTGCGCCTTATTTGGCAACGTCCCACACGGCTTGGCTAAAGGAATCGCCGCCCTCCTGCGATTCGATGATGCCCGCGATGCGGAAGCCGCCGCCCTTCAACAAACAATCGCCCAGCACGGGATCGAAGGCGCGCTTCGGCAATATGCAGGCCTTGAGAGTGGGCACCCGCTTGTGGCGGCGGTGAAGGACGAGTACGGAAGAATGGAGAAAAACAAAAGCTGACCGTCTTGCAAATGTCGTCGACCTCCAATCGTGCAAAAATCCCGGGGGATCGACGACAATGTTTTTTTGCGTCAAAATCCTACAAACAACACGGCTGAACGGTATTGACAGAATTTTTGAAACGTGATATTCTGAAAACAACTCAGAGAGAAAAAGCTTGATTTGATGCGTATGGTTTGG # Right flank : CACTACAGTACCGTACAACATTTTCCCTCTCCGATGCAGGAGTTTCCGTCTGTACTTGCGAATGGATATACTGGAACACGTTCAAAGAGAGGTGATCAAATGGCCATTGATCATGACCGATTGTTCAAAGAGCTGATTCAAACGTTCTTCGAAGAGTTTCTTCTCCTCTTTTTCCCCGACATGCACGAACACATTGATTTCCGCCATTTGTCCTTCCTGTCCGAAGAACTGTTCACTGATGTCACGGCAGGTGAAAAATACCGCGTCGATCTATTGGTCGAGACGAAGCTGAAAGGGGAAAATGGGCTGATCATCGTTCATGTGGAGAATCAAAGCTACGTGCAACCATCGTTTCCAGAGCGCATGTTTATCTATTTCAGCCGTCTGTTTGAAAAATACCGCACGCGCATCGTTCCGATCGCTGTCTTCAGCCATGATGCCCTTCGCGAGGAACCATCCGTGTTCTCAATCGCGTTTCCCTTTGGCGACGTGCTGCAGTT # Questionable array : NO Score: 9.24 # Score Detail : 1:0, 2:3, 3:3, 4:0.98, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTTATCGTACCTATGAGGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:63.33%AT] # Reference repeat match prediction: F [matched GTTTTTATCGTACCTATGAGGAATTGAAAC with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-1.40,-0.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-8] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [63.3-50.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [10.05,0 Confidence: HIGH] # Array family : I-B [Matched known repeat from this family], // Array 9 1999470-2001682 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP018058.1 Geobacillus thermocatenulatus strain KCTC 3921 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ======================================= ================== 1999470 30 100.0 35 .............................. CTCTTATGCTTCTCATATGCTTCTTTCGCTTTTTC 1999535 30 100.0 36 .............................. TACGTAAAACTGGATGTCCACGATTTTGACGCAGTC 1999601 30 100.0 36 .............................. CCTTTTACTCAAATGAGAAACCAAATCCGTCGACAA 1999667 30 100.0 36 .............................. TACGTAAAACTGGATGTCCACGATTTTGACGCAGTC 1999733 30 100.0 37 .............................. TAATTTCGTTAAGTTTTATGTTCAGAATCAATTGTAG 1999800 30 100.0 35 .............................. ATAAAGGAGAGGATTCTATTATGAAAAGCCTTGTG 1999865 30 100.0 38 .............................. TCGTTTTTCTTTTTCCTTTTTCGGCGACAAAATACACC 1999933 30 100.0 37 .............................. TTTTTACCGTAGAGGCGTTGACAAGTGACCAATACGA 2000000 30 100.0 37 .............................. TCAAAAAACGGTTCGAGCCCATGAAGGAACACAGCTG 2000067 30 100.0 36 .............................. ACGCTAAAGACAGCTTAAAATATGGAGATTTTTATT 2000133 30 100.0 36 .............................. CTTTGAACGCCAACTTGAAAAATGTTACAATTTCTA 2000199 30 100.0 37 .............................. CTGGGTGTGGTTCGAGGAAGCCTTTGAAATCGAGACA 2000266 30 100.0 36 .............................. CGTCCGATCGCAAACGAATATTAATTCGCTCATCTC 2000332 30 100.0 39 .............................. TAATCGGTCTAAATGCTCCTTGATAAAGACATTCGGCAG 2000401 30 100.0 38 .............................. ACAGAAGAGCAAGTCAAGGCATTCCGAATTGCAGACAA 2000469 30 100.0 36 .............................. TTCATCGTGCAAAAAATCATGTTCCAGACCAAGGTC 2000535 30 100.0 37 .............................. TGAAACGACAAACATTCGGCAATTTCGCGTCACGACA 2000602 30 100.0 38 .............................. TCAAGTGGTAATTTTGGACCGGCTGAATTTTAGGATTC 2000670 30 100.0 35 .............................. TTCAAATTTCATCACATTGTCTACATAACGAATCA 2000735 30 100.0 36 .............................. AAAAATTCGGCGTAATGCAGCACCTCGAAAACGCCG 2000801 30 100.0 35 .............................. AACGTACCGCCACGCCACCTTTCGGTTGCGTTTGC 2000866 30 100.0 38 .............................. TTTCTTCGTTGGCTAGCGTTGGTCTTTCGGTGATGGTG 2000934 30 100.0 37 .............................. CCAGACGACCGGAAAGAAAGTCCGGTCGCTTCGAACT 2001001 26 86.7 36 ............----.............. TCTTTCCAGAACGGGATAATTTGCTCGCTCGGAATC 2001063 30 100.0 35 .............................. TAAAGGGACGTCCGGAGCATCATGTGTCCAACTTT 2001128 30 100.0 35 .............................. AAACGAAAGTCATGACAATGTGACGAGGGTAACGA 2001193 30 100.0 36 .............................. TTAGCTTTTCCGCTTTTGATTGCAGATGTTGCTAAC 2001259 30 100.0 36 .............................. AATTTCAGTGCCAACTGTGTGATCAAATGGAATTTG 2001325 30 100.0 34 .............................. TACTTTTTTCTATTTGCTTTCGTACGGCATTTCC 2001389 30 100.0 34 .............................. CCATCTGAACGTCAAGAAATCGACAACCTTGCCC 2001453 30 100.0 38 .............................. AAAGATGACGATATCGTGATATTCAGTCATGACAATGA 2001521 30 100.0 36 .............................. AATTTACAGCCACTTTTGGCTTCTTTTGCGACGTTG 2001587 30 100.0 36 .............................. CTTCATTCATGACGGCGCGCTTTTCATATTCTGCGA 2001653 30 93.3 0 .....................A.C...... | ========== ====== ====== ====== ============================== ======================================= ================== 34 30 99.4 36 GTTTTTATCGTACCTATGAGGGATTGAAAC # Left flank : TGGGAGCGCAAATCGCCTACGCCCGGTTTACTGCCTTGCCGCCGCTTGTGTATGTGAGTGTGCTTGGGCGCCTGATGGTGTCGCCGCTGTTGGCTGCGTCTTTGATCTTTCTATTAGGAATGGATGGCGTGACGGCTCAAGCGTTGCTGATTGCCAGTTCGTATCCATGTTCACGCAATACGGCGCTGTACGCGCTCGAGTATGACTGCCACCCCGATTACGCCGCCCAGGCAGTGCTGGTGTCGACCTTGTTGAGCGCCATTACCGTGACAGGCACAGTATATGCGGCCCGCCTGCTGTTTCCGATTGGCGGATGAAAACAGGGGGCAAGCTGTCGTCGACCCCCAATCGTGCAAAAATCCCGGGGGATCGACGACAATGTCTTTTCGCGTCAAACTCCTACAGCCAACGCAGCTAGACCGTATTGACAGAATTTTTGAAACGTGCTATTCTGAAAACAGCCAAAAGGGGAAAAGCTTGATTTTATGCGCATGGTTTTG # Right flank : CTATTTCCCGCCACAGCTGAGCCGCCGCTGAGTTCAGCTTGTTTTACCGCTCGACATAGGAAAAGAGCAAATGCGAAATGGCGCATGCCCAAAAAACGTGGGAGGGATAAGGAGGAATTTGGACGCGAAGAGCGAATACAGTACGGTGAATCCGACAATGCAGGGAGGGAAAATGTGGCCAAACAGCGCGTCGATCATGACCGGTTGTTCAAAGAGCTGCTGTCGACGTTTTTCGAAGAGTTTTTGCTTCTTTTCTTTCCTCACGTGTACGAGCACATCGATGTTCACCATCTCTCTTTCCTCTCCGAAGAATTGTTCACCGATGTGACGGCTGGGGAAAAGCATCGCGTCGACTTGTTGGTCGAAACAAAGGTGAAAGGGGAAGACGGGCTCGTCATTGTCCATGTCGAGCATCAAAGCTACACCCAGCGGACCTTCCCCGAGCGAATGTTCCTCTACTTCAGCCGCTTGTTTCAAAAATACCGCCGCCGCATTCTCCC # Questionable array : NO Score: 9.23 # Score Detail : 1:0, 2:3, 3:3, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTTATCGTACCTATGAGGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:63.33%AT] # Reference repeat match prediction: F [matched GTTTTTATCGTACCTATGAGGAATTGAAAC with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-1.40,-0.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-16] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [60.0-45.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [10.05,0 Confidence: HIGH] # Array family : I-B [Matched known repeat from this family], // Array 10 3618095-3616997 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP018058.1 Geobacillus thermocatenulatus strain KCTC 3921 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ======================================== ================== 3618094 30 100.0 35 .............................. GTAGAAACGGTGTGTGCAACGCCCTAGCGCCGCAC 3618029 30 100.0 35 .............................. TAATTCGATTGACTGAAGAAACGAAAAATAAGTTT 3617964 30 100.0 39 .............................. TTGAAGGTACGTGGAAAGACATGTCTCCTAAAAGTGGTG 3617895 30 100.0 36 .............................. ACGTATAAATTCCCCAACCAGAAAACCGTTGGGAAG 3617829 30 100.0 36 .............................. CCAACAGCGAAACGTCTTCATACACCTGTTTCGCCC 3617763 30 100.0 40 .............................. TCACCTACAAGCGCTCATCGTGACATACTCCCGCCACCTA 3617693 30 100.0 36 .............................. AATTTTTCACAGAACGAAGAACCGAAGTAAGCAAAA 3617627 30 100.0 37 .............................. CTTTCTCGACTTTTGCCAACTCTGCCGCCAACCAATC 3617560 30 100.0 38 .............................. AATTGGTGTTCTTCCGCATATCATGCACCGATCGCCGA 3617492 30 100.0 35 .............................. TATTCCGAAATCAACATCTATCTCAATGGATGTTT 3617427 30 96.7 37 ............T................. ATGCGGCTGAACAGTACCTCAAAAATGCCACAGGCGT 3617360 30 100.0 35 .............................. ATGAAATCCAATCAATGAAAAGGGGTGCATGAACT 3617295 30 100.0 35 .............................. CGCCTGTAGGCGTCGAAGTGGGGGTTTCTTGTCGA 3617230 30 100.0 40 .............................. AAATCAAATCTCCAAGCCGTATAATGATGGATGAGGTTGG 3617160 30 100.0 38 .............................. TCGCAAACGCTCAAACAATGTTAAAGATTTAGGATTAC 3617092 30 100.0 36 .............................. TCGGCCTCAAAACGTTTCTTGAGATACTGATGTTAG 3617026 30 76.7 0 .C...C..........C...AA.....CC. | ========== ====== ====== ====== ============================== ======================================== ================== 17 30 98.4 37 GTTTTTATCGTACCTATGAGGGATTGAAAC # Left flank : AACGTGCCCGCCTTGAGCGCCAGAAAATCGAGCAGGAAATGCTGGAGCGGAAGAGACGCGAGGAAGAAGAACGAGCAAGGCTGGCCCTCCTCTCCCCCGAAGAACGGCTTGTGGCCGAAATTGAGCGGCTGACTGACAGCGAAACGGATAGGCAGCGAAGCAAGGATAGCCTTTACCAACAGGTGATCGAGCAGCAAAACAAACAAGCCGCCGTTGCGTTGCAGGCGTATTGGAAACGCATCAGAGAATGGGGAAAAGCCGTTAGCAAAAAGCAAAAGCAAAAAATGGACAAACTTCAACAACTGTTGGAGGAAAAGTGAGGGTCTTGCGATTGTCGTCGACCCCCAATCGTGCAAAAAAACCGGGGGATCGACGACAATGTTTTTTTGTGCCGAAATCCTACAGCCATCACGGCTGAGGTTGTATTGACAGAATTTTTGAAACGTGATATTCTAGAAACAACCCAAAGGAAAAAGCTTGATTTGATGCGCATGGTTTGG # Right flank : TCTCCAACTCCCGTCTCCCACCCATATTTGAATCACGCTTTCATCCGCACAATTTTTCTCTTTGTGTGCTGTCTTCGCTGGCAATATGGAGAAGACCCGCCATCTTCCCTTGATCCTCGCCACGCGCAAAACTTCTTCTTCGTTCTGTTTTTCTCGCGGCAGCTTTGTTCGATGCGCTATACTTGATAGAAGGAGCAACATTTGTTTGCTTCCAGATGGGCGTTTGTTTTTGCCTTTTCACGATGGGTATAGCCAACAAAGGGAAGGGGAACGGTGATGCGGTGCAAGCTTCGCGATCTCGGTTTTTCCATCGGCACGCTTCCGACAGGGGAGCGCAATCAAATCACCGATGTGCCCGGGGTAAGGGTGGGGCACGTGACGATTCGGGAAGAGATGGACGAACGGACGGTGATCCGCACCGGGGTGACGGCGGTGCTGCCGCACGGGGGCAATTCGTTTTTGGAGAAAGTGCCTGCAGCTTGTTTTGTGTTGAACGGGTT # Questionable array : NO Score: 9.18 # Score Detail : 1:0, 2:3, 3:3, 4:0.92, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTTATCGTACCTATGAGGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:63.33%AT] # Reference repeat match prediction: R [matched GTTTTTATCGTACCTATGAGGAATTGAAAC with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-0.50,-1.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [7-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [53.3-61.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,9.78 Confidence: HIGH] # Array family : I-B [Matched known repeat from this family], //