Array 1 33483-36942 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAJCCS010000021.1 Flavobacterium psychrophilum strain 97708 contig00021, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================================== ============================== ================== 33483 46 95.7 30 T....T........................................ TTGAAGCCACATTTAGCACTCATCAGAATG G [33485] 33560 46 100.0 30 .............................................. AAGTTATGAAAACTAAAATTAATATCAGCA 33636 46 100.0 30 .............................................. AATAGACCCTAGTACAATAGACCATACAGT 33712 46 100.0 30 .............................................. CGTTGAGAGATGACGACGTTATTGACGTTG 33788 46 100.0 30 .............................................. ACTGGAGATTTAGCCAAATACCATGACATT 33864 46 100.0 29 .............................................. TCTTCTATATAGCGCATTTTGGAACAACA 33939 46 100.0 30 .............................................. ACTGAGGCAAAACACGTGTTAGCAGTTAAA 34015 46 100.0 30 .............................................. CCAATATAAGTAATCTAAACGAAATGATAT 34091 46 100.0 30 .............................................. AAAAAACAATACCGATAAAAACATAGCTAA 34167 46 100.0 29 .............................................. CACATTTATCGAACCGATTGTTATTATCA 34242 46 100.0 30 .............................................. CGACTTGCCTTTTTAATAAAAAACAACATG 34318 46 100.0 29 .............................................. AATGAAAATATTTTTTCAATCATTTTTAC 34393 46 100.0 30 .............................................. ACAGCAGAAATTAAATTGATGGCTGCACAT 34469 46 100.0 30 .............................................. GTGCAACAGGAGTTGATTTAGATTTCTTGA 34545 46 100.0 30 .............................................. AAGAAATGACTAGAATTAAAGCTTCATTGA 34621 46 100.0 30 .............................................. CAATAAGATTGAATTTCTTTAGATAACAAC 34697 46 100.0 30 .............................................. TTTGCGCTTACCTGCTTCTCATAGCCATAG 34773 46 100.0 30 .............................................. TAACTTAAAATAAATAAACGCCATGACACA 34849 46 100.0 30 .............................................. AAATAAAATTTAAAGTCAAGTTCATTATGC 34925 46 100.0 30 .............................................. ATAAAAATAGATGTTTCAGGACTTTCGCAG 35001 46 100.0 30 .............................................. TTTAAGTCTCATTTTATTGCAGTTCAAAAA 35077 46 100.0 30 .............................................. GCAAATGTAATAAACTTATTTTATTATTTA 35153 46 100.0 30 .............................................. GGATAAAATCATCAACACCATCACGGAGAA 35229 46 100.0 29 .............................................. ATCAAAGTCTAAATCTATATCAAAATCCA 35304 46 100.0 30 .............................................. ATACGTCTTACCTACTCCAGCTTGTCCCGA 35380 46 100.0 30 .............................................. AAAAAGAAATATTCGATAACGAAGGCTGGA 35456 46 100.0 29 .............................................. ATTGGTTATCGTAAAAATGAACGCATTTT 35531 46 100.0 30 .............................................. ACGAGTTCGACAAGATGGAACTCGTTAATA 35607 46 100.0 30 .............................................. CAGTTTGTTTGTTTATCGGTTGTGCATCTG 35683 46 100.0 30 .............................................. TATCAATTGCTATATTTACCATATCAATTG 35759 46 100.0 30 .............................................. CAAGTAATGCCAGCGGGTAGTGCGAAGTTA 35835 46 100.0 30 .............................................. TACCTGTTCTTTTACACGTCATTAATTTTG 35911 46 100.0 29 .............................................. GAATCAAAGGAGTGTAGATACCTTTCTAG 35986 46 100.0 30 .............................................. ACTCTTGTATAGTTCCTGTGCCTAGTGTTT 36062 46 100.0 29 .............................................. TCCACATCATTCAAGGGAAACCAACCTTA 36137 46 100.0 30 .............................................. TAAGATAAGATACGGCAGCTCGACTGCTAA 36213 46 100.0 30 .............................................. AAAAATAACATGGTTGTATACTTTAGCCAA 36289 46 100.0 30 .............................................. TTTAGCTCCTTATTTACCTTTTAAATTGCA 36365 46 100.0 30 .............................................. ATTAACACGAGGGTCTCACCGTAGCTTTCG 36441 46 100.0 30 .............................................. TGAATACTTTTTATTATCTTTAAGTATTAT 36517 46 100.0 30 .............................................. ATAAAAAAATATAATCCTAACCAAAACAGG 36593 46 100.0 30 .............................................. CTTTTGCTGGTTCTCCATAACTAGGTGGGT 36669 46 100.0 30 .............................................. CAATACTATGCTAATAAACAAGAGAAATTA 36745 46 100.0 30 .............................................. CAATTCATAACTAATTGATGACTTGTTGTT 36821 46 100.0 30 .............................................. ATAAGTATTCAAAATTACAGCTTTTTTAAT 36897 46 100.0 0 .............................................. | ========== ====== ====== ====== ============================================== ============================== ================== 46 46 99.9 30 GTTGTGAATTGCTTTCAAAATTGTATTTTAGCTTATAATTACCAAC # Left flank : ATAAAAATGGCATGTTTTGGTGGTTCTTCTAATGTTTTCAAAAAAGCATTAAATGCTGCAGATGATAACATGTGAACCTCATCGATAATATAAACTTTATATTGTCCCGTTTGTGGGGGGATACGAACTTGATCGATTAGATTACGAATATCATCGACCGAATTGTTTGAAGCCGCATCGAGTTCGAAAACATTGAAAGCAAAATCTTCGTTCGGGTCGTCGTAACCTGGTTGGTTTATTTTTCTGGCTAAAATTCTGGCACAAGTTGTTTTTCCTACGCCACGAGGACCAGTAAATAATAGGGCTGATGCCAAATGATTTGTTTCTATCGCATTTAGTAACGTATTGGTAATGGCTTGTTGCCCCACCACGTCTTTAAACGTTTGCGGACGATATTTACGAGCCGATACTACAAATTGTTCCATAAAAAAATATTCGAAAGCAAATATAATGGTAATAAGTGAAAATGCAAAAGTGAAAAGTGAAAAGTTTTAAAATGT # Right flank : CATACCGCGAGTTAATCGTTTGATATGTTGGTGGTTATATGCTTATTTTGAAATTAAAAAACAGTTCTGTTTGTGTGTTGATATTCTAGTAGGTCTAATATTTCTAAATCCTATTTTTCAAAAAAGTTCTAATTGTTGCGAAGGTTTGTCTGTTTCTACAGGTTTTTTTCCATAAAAAAGCTCCATCATACCAAATTGTTTATCGGTTATTTGCATCACACCAATTTTGCCATGTTCGGGCAAACTATTTCTTATTCTTTTGGTGTGTACTTCGGCATTTTCTCTGCTGGCACAAAACCGCATATAGATCGAAAATTGAAACATAGAAAAACCATCGTCCAATAATTTCTTGCGAAATTCACTGGCAATTTTACGCTCTTTCCGCGTTTCGGTGGGCAGGTCAAAAAATACTAATATCCACAAACTTCTATACTGGTTTAAACGGGTGTAATGTTCGTCATACATAAATAGGGTATAAAATTTTTCTTGCGGCTCCCGCA # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGTGAATTGCTTTCAAAATTGTATTTTAGCTTATAATTACCAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:73.91%AT] # Reference repeat match prediction: F [matched GTTGTGAATTGCTTTCAAAATTGTATTTTAGCTTATAATTACCAAC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-3.00,-0.90] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [3-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [76.7-71.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.87,0.41 Confidence: HIGH] # Array family : II-C [Matched known repeat from this family], //