Array 1 102500-101091 **** Predicted by CRISPRDetect 2.4 *** >NZ_VNSV01000006.1 Klebsiella michiganensis strain 620264432508 620264432508_6, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 102499 28 100.0 32 ............................ TATAACTCGGCCACAGGTCGGCTTATCCTGAA 102439 28 100.0 32 ............................ ATCAGGCAAAACATTTCCTGCATGTTCGCGAT 102379 28 100.0 32 ............................ TGATCCGCAGATTGTACCGGCGTCGACCACAG 102319 28 100.0 32 ............................ AGACCGATTTTATCAGCCAGGGGGATGATCAC 102259 28 100.0 32 ............................ ATGTACTGTGCCAGCAGCTGAATGCGGAAGGG 102199 28 100.0 32 ............................ GCAGTGTCGCGTTCCAGAAACAGCCTGATTTT 102139 28 100.0 32 ............................ AATATAAATTGCCTGAATTTCTTGCGCGTACT 102079 28 96.4 32 ......................C..... ATTTGCCGAAAATGCTGCCGCAGTTGTATTTG 102019 28 100.0 32 ............................ AGTATCCTAAAGAACCGTTGCGGCGGCGGTTG 101959 28 100.0 33 ............................ TCTACGTACAGCAGAGTAAAGCATGAAGTCAGA 101898 28 100.0 32 ............................ TTCCTGGTTTCACCATCTACAGCTTTCACCTG 101838 28 100.0 32 ............................ TTCAGGGATATTCGCGATGTCCGCCTGAGCAG 101778 28 100.0 32 ............................ TTACAGGTGACATCGCACACCCCTGATACCTC 101718 28 100.0 32 ............................ TGTGGCAGCCGAACAAAAACGGCGACGGGATT 101658 28 100.0 32 ............................ AGTGCAGCAAACCAGAGAAGGGCGCGCCGGCT 101598 28 100.0 32 ............................ AGAAGAAAAGGCAGACCCGATCAACGAAGAGA 101538 28 100.0 32 ............................ GTATTCGGTCCAGTGCCTGATGGCGCGGATGC 101478 28 100.0 32 ............................ CGCCGCGAAACTGGGCCACGCCTTCAGCTGCT 101418 28 100.0 32 ............................ ACCAACAAACTGCAGGCAGAGCAGAAAGCCGC 101358 28 96.4 32 ............G............... AAACTTCGCGCGGATTTCAGCGATTTTGTTTA 101298 28 96.4 32 ............G............... CGCTACTCCGCAAAAATGAAATTCGTGTGCTG 101238 28 100.0 32 ............................ ATGTTGCGGAGAATCCACAGCCTGTTCTCAGT 101178 28 100.0 32 ............................ TGCACGAAATCAACGTTGCCCGCTCGGTTGCC 101118 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================= ================== 24 28 99.6 32 GTTCACTGCCGTACAGGCAGCTTAGAAA # Left flank : CGGTTATCCATCAGGTGGTGGATAAATTTATCGTCGAGCTGCAGGTTCAGCTGGATCAGAAAGGCGTCTCTTTGGAAGTCAGCCAGGAAGCCCGCGATTGGCTGGCCGAGAAAGGCTACGACCGGGCCATGGGCGCGCGTCCAATGGCGCGGGTGATTCAGGACAACCTGAAAAAACCGCTGGCCAATGAGCTGCTGTTTGGCTCACTGGTTGACGGCGGACAGGTGACCGTTGAACTGGATAAAGAGAAAAATGCGCTGACCTACGACTTCCAGAGTGCGCAGAAGCACAAACCGGAAGCTGCGCATTAAGTTTCGGTACTCAGTGACAAAACCGGCCTCAGGGCCGGTTTTTTTATGCCTATGTCCTGGACCCTTTTTTATTCCACTTTTTAACTTGTTGATTTTAATAAAGAGAAAATATAGCGTAAAATTATGGTGGCAGAGAGGATGTGTTGATTAATTTCAATGATAACAATATGGTAGGGTGTTGTTCGTTCA # Right flank : AGAGCTTGCCCACACTGCTGTGCAAGCCAAACGAGTCTAAAGAAATTGCCAAAGTAATAGGTTATTTTGCAAGTTGCGATGAATGTCACCGTATTGCATCTAATATACTGTTTTTATAAACAGCTATCGACTTTGAGCCACAGGATGTGACTATGCCCGCGAAGTATATTGCCCCCTCGGATTTAAAAACGATACTCCATTCAAAACGCGCCAACATTTACTATCTGGAAAAGTGTCGTGTGCAGGTTAATGGGGGGAGAGTGGAGTATGTTACCAGTGAGGGGCATGAGTAATTCTACTGGAATATCCCAATAGCAAATACAACGGCCATTATGCTAGGAATGGGAACCTCTGTTAGCCAGGCAGCGATGCGTGAGTTCGCCCGCGCGGGTGTGATGGTAGGTTTTTGTGGTACGGATGGCACACCTTTATATGCCGCCAATGAAGTCGATATCGACGTTTCCTGGCTATCGCCACAAAGTGAATATCGACCAACGGAG # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGTACAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [6,8] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTTCACTGCCGTACAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.70,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [55.0-63.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.41,5.24 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 1 30540-30145 **** Predicted by CRISPRDetect 2.4 *** >NZ_VNSV01000007.1 Klebsiella michiganensis strain 620264432508 620264432508_7, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 30539 29 100.0 32 ............................. GCTATCAGCCTCGTTTTGTAATCCATGTTGCA 30478 29 100.0 32 ............................. AATCTTCTAAACGTGCTGGCTACGAACGTTTT 30417 29 100.0 32 ............................. TCGCGACAGATTGGGGCGACCTGGTATTTTGC 30356 29 100.0 32 ............................. TCTTCAGAGCGCACCCTTGCTGTTCAGGCTGC 30295 29 96.6 32 ............T................ CAATGGTAACAAGTGATCCGAGCGCAATCATC 30234 29 96.6 32 .............T............... GACTCACGAAACGCTTGGTTGATGTCTGAATG 30173 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= ================================ ================== 7 29 99.0 32 GTGTTCCCCGCGCCAGCGGGGATAAACCG # Left flank : AGCATGCGCTGGTTAAAGCGAAAGTAGCCGTGACCGTTTTCCCGCCTTCCCCTGACGTTGCCTCTTTTAGCGGAATAACGGCGTTATTTCCCTTTATTCAACAGCCAACCCCATTACAGCAAAAAGCGCTTGAGCTGGATATTGATAAACAAGGTCCGCAATTATTTATTCTTGAAGATGTGACTGGTGCTGGAAAAACAGAGGCTGCGCTTATTTTGACACATCGCCTGATGGCTACGGGAAAGGCGCAGGGGCTCTATTTTGGTCTGCCGACGATGGCGACGGCGAATGCCATGTTCGATCGTATGTCGGAGAGCTGGCTGGCGTTGTATCAACCCAGTTCACGGCCAAGCCTGGTGCTGGCGCATAGCGCACGTGGATTAATGGATCGCTTCAATCAGTCTTTGTGGTCGGGAGATTTATCGGGTTCAGAAGAACCCGATGAGCTCCAGCCATCCAGCCAGGGATGCGCCGCCTGGTTTGCCGACAGTAATAAAAAA # Right flank : CCCGGAGGAAACGTGGCAACAGTTCAATACACGTGTTCCCCGCGCCGCCATCCTTATTATCCTGTACTTTATTTTTTCCAGCATTCTTTAGTGTGGCAAAGTCCGCTTCCAGGTAATACTTGCCAAATTTTGGGCTCATGGGAACAGTGCGCCGTTTTTAACATAGCGCTTATACCGATGTTTTACCGATGCTGGGTTCCGAGCCCAAATCCAACCCGTCCTGCCAGACGCGCTGCCAGATATAAACCTGGCTGTCGGCGATGGATCGCGTGCTGGCAGCCAGTAGCAACAATGGTATTAAAAAATGAAAACGCATCATGGCGACAGGCCTTGTTGCCGGATTTTATCGTTAGTCTATTTTGAGGCGGGTCTCTTCTCCGCCTTCGCCAGCTCTTTCACCAGCGGCAGCATCACTTTCATCACATCGCGTCCGCGATGCTCAATACGCCCCGGCAGCGCTTTATCAATATACTGTAGGTTATCCAGCTGTACGTCATGCC # Questionable array : NO Score: 6.21 # Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,5] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.00,-13.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [45.0-45.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.65 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //