Array 1 15909-19320 **** Predicted by CRISPRDetect 2.4 *** >NZ_BAEU01000042.1 Halomonas sp. KM-1, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================= ====================================== ================== 15909 33 100.0 36 ................................. ACTCACACCTCGAGCGACTTCGGCCACCTGCTGGCG 15978 33 100.0 36 ................................. GCCCAGGTGCAGCTATATATGCACCACAGCGCGCAA 16047 33 100.0 36 ................................. ACTGCCGGTCGTATCTCCGGCAATGGCTCTGGCCAG 16116 33 100.0 34 ................................. CACCTCGAGCATGTCGAACAGCGTCGGCATCGAC 16183 33 100.0 34 ................................. TCTTCCGAGGTGACGCTATGCGTTACATCACCCT 16250 33 100.0 33 ................................. GATGTCGGCTGGTTCGAACCCCGCTGACCACCG 16316 33 100.0 35 ................................. CCGATTACAGGACTGGAAGAGGCCATAGCGCCACT 16384 33 100.0 37 ................................. ACGCGAGTGGTGAAGGTCTCTGGCCGCGCCCTTGCCG 16454 33 100.0 36 ................................. CGCGGCATGCCGGTGGCCGACGTGGTCGCTACCCAG 16523 33 100.0 38 ................................. CTGGCGGCTGCCTGCACTCGCATCATTGCCAGCCCCAC 16594 33 100.0 34 ................................. TTTCGTGGCCTCGCTCATCTCCGTGGTGTTGATC 16661 33 100.0 34 ................................. ACAACATCACCGGCTACCTGTCGATTGCGGAGAT 16728 33 100.0 34 ................................. TCGATGTGCCAGGTGAAGCGGAAGGTCTGGCCCA 16795 33 100.0 35 ................................. CGCCTGGGGCTGCTCGATTCCACCGAAGAATACGC 16863 33 100.0 34 ................................. TCGTCCTCGATCTTGACGTTGAAGCCGGCGGCGC 16930 33 100.0 36 ................................. GATAGCAGACGCCGTCCTGATATCAGGAGCTATCGG 16999 33 100.0 33 ................................. CGTAACAAGGTGCCGGCCGGCTACGACGAGGAG 17065 33 100.0 35 ................................. CTCTTTTTTCGAGAGGTCCGGCTCGACAATCGGGC 17133 33 100.0 24 ................................. GTTGAGTCCGGCAAGACGTTGACC Deletion [17190] 17190 33 84.8 33 C.GC........G...C................ CAAATCAGCACCCTACCGACGACCCTGTCTAAC CT,T [17196,17199] 17259 33 100.0 35 ................................. ATCGAGTGACTTTTTGGCCCGGCGGTTTTTCATGC 17327 33 100.0 33 ................................. GCCCACAGCATGCCGCCGGTGGCGTAGCTGGGC 17393 33 100.0 35 ................................. TGAACAGGAACAGTTATATCCCTATAACGAGAAAC 17461 33 100.0 36 ................................. GCCATTCTCGTCAACGGCCGCGTATGGGTGCGTTGG 17530 33 100.0 34 ................................. GGTACCAGCATCGTGGGCACGTCGGTGCCGGGGT 17597 33 100.0 33 ................................. GCGCTACGCCTGCCCCTGCCCCCACCTGACCAG 17663 33 100.0 36 ................................. CTTGAGAACCTCAACCGTGGCTATGCGTCAGGTGGG 17732 33 100.0 34 ................................. AGGCGCGCGTTACTAATCTGGAGTATGAGCTGAA 17799 33 100.0 33 ................................. AGATTCGGGCAATGGGGGGCCTTGTTGAGTGGT 17865 33 100.0 36 ................................. TTGGTCATGCCGCGAGTGACGGGGTAATCGTGCGGC 17934 33 100.0 35 ................................. ATGTTCGTCACGCATAACCTGGCCTGGCTCCAAAT 18002 33 100.0 36 ................................. GTGGTGTGGTGCCCTGGCGATATGAAGGTGAGGCGC 18071 33 100.0 34 ................................. TTACATCGCCAGATGTGCGAAAGAGGGGCGTCCT 18138 33 100.0 36 ................................. GCCGAAGGCGGCGGTATCGGCAAAGATGTCGAGGGC 18207 33 100.0 35 ................................. CCCCAGCTCGTCGCCGAATGTTGTCGCTGCGGCGA 18275 33 100.0 34 ................................. CGTCCCATTCTGCCCAGTGAGCAGGATGATGCTC 18342 33 100.0 36 ................................. ATGCTCATCCCCTCCCCAATGCCGCACGCAGGGAGC 18411 33 100.0 33 ................................. GACATCGCCGGGCCCTGCTACGAGATGCGCGAA 18477 33 100.0 34 ................................. CTGGACAGGTGCGTCAGCAGGATCTGAGCATCAC 18544 33 100.0 36 ................................. GCCAAGTATTTGCGCTAATACGGCGTCATCCAGCAG 18613 33 100.0 33 ................................. AAGCCCGAACTGTCGTTGACTGAATACAAGAAG 18679 33 100.0 35 ................................. TGAAGCTGCACCACCACACGGAACGGAATGTTGTG 18747 33 100.0 36 ................................. TGGGCGTTGCTGCTACCGACGAAGCCCGTGCCGCCG 18816 33 100.0 34 ................................. GTACTCAGCCGCCAGGGCGTCACGCTCGTCGTCC 18883 33 100.0 35 ................................. TCGTACTTGCCCTCGAACCACTCGCGCACCGTCTC 18951 33 100.0 35 ................................. TTGTCCAGGCGACGGTAGGCGTCGCGGTATGCCGG 19019 33 100.0 36 ................................. TCCAGCGAAGCTGCGAATGCTCTCACCCGCAAAATC 19088 33 100.0 34 ................................. ACGGTGGGCGTGCCCGGCTATGAGAGCGTCAACG 19155 33 100.0 33 ................................. ACTGCCGGGCGGATTCCTCAGGCAAGCAGTATT 19221 33 100.0 34 ................................. GCCCGGATGGCCTGTGTCACCGCCCTGGTGTCTT 19288 33 100.0 0 ................................. | ========== ====== ====== ====== ================================= ====================================== ================== 51 33 99.7 35 GTCGCGGCCCGCACGGGCCGCGCGGATAGAAAC # Left flank : TCGACTAGGAGAGTGCAGCGATGATGGTTCTGGTCAGCTATGACGTCAGCACGTCATCAGAGGGTGGCGAAGGAAGGTTGCGCCGGGTTGCCAAAGCTTGCCGTGATGTCGGGCAGCGAGTGCAATTCTCGGTTTTCGAGATCGAAGTCGATCCTGACCAATGGGTTCGCCTTCGACAGCGGCTAATCGATCTGATCGATGATGAAGTGGATAGCTTGCGCTTCTACTTCCTGGGAAAGAACTGGAAGAATCGTATTGAGCATATTGGCGCAAAGCCTGCCTTGGATATGAATGGTCCTCTTGTTTTCTAGTCTCCCTCCTGTTCTGCGAACCATAAGTGTCCTGGGTTTTCCTGGCAGGTTCGCGGCTCTTTAACAATTTGATTTTTCTAATTTTATTATGCCTGGCCATCAAAACCAGGCAGTATTTCCTGCTGCAGCGTCCTATTTCGCAGAACTATGGGCATTTCACCTGCTCCATCAAAGCGTTATAAGGGAACA # Right flank : TTCGGGTTGCCTTCGCCGTAGCCGAAAGCGCCAGTG # Questionable array : NO Score: 3.24 # Score Detail : 1:0, 2:0, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.00, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCGGCCCGCACGGGCCGCGCGGATAGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [6,2] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-10.60,-11.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [55.0-21.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.64,0.37 Confidence: LOW] # Array family : NA //