Array 1 41462-41073 **** Predicted by CRISPRDetect 2.4 *** >NZ_WTFB01000002.1 Gilliamella sp. Pra-s65 NODE_2_length_328737_cov_208.496142, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= =============================== ================== 41461 29 100.0 31 ............................. TCAACCAAATGGAAGGGGATATGCATAATTT 41401 29 100.0 31 ............................. AAGTCAATATTACCCTCGGCAACATTTGTGA 41341 29 100.0 31 ............................. CGTTTTTGGTCACTTTTTGCTTGAATTTCTG 41281 29 96.6 31 ............................A CTCAACCCTTTGTTTTTAGCTGTTAGCGTTA 41221 29 100.0 31 ............................. GCTTACGCAGAGGATTTATTATCAAGTGGTG 41161 29 100.0 31 ............................. GTGCTAATTGGGCATATGGAAAAACAAAGTT 41101 29 96.6 0 ............................A | ========== ====== ====== ====== ============================= =============================== ================== 7 29 99.0 31 CTTTAACGCCGTGTAGGTGGTTTAGAAAT # Left flank : TCAAGTCAGTAGCCTCAGCACTTCCAGCAGCGGATATGCTGTTTGCACGACACCTTAGTTTTTAACATTTATTTCTTAATCCTTAGGGCGTGGTGGTAGTTATGGTGCAAATAGAGGTTAATATAGTAAAGAATAAAGCCCTAGCATAAGTTGGGGCATTACCTTAGAATTGCGTTGTTTTGTTAAATCACCTACACGGCGTTAAAGTTTGCGGTGCTTTAGCTATGACTGTCAGCGATTTTCTAAATTGCCACAACAGCGCTATCCACGTCAAACAACTAATCACATTTACAAATAAAAAGTGTTTACAAAAAATATTGATTTTATGTGATTTATTTTTTAGGTATTTTCTGAATACAACCCCCCACAAACCCTTTTTTTAACGATAACTTAAAACGCAATAAAATCAACATATTAAAAAATATCTCAAAAAAAGGGTTTTCAAAGCTAAAATTGTCGTTTATCTTTATACAACAAGATTTATCGAATCTTAAGTTCTA # Right flank : ACTTTTCTCAACATCAAGCACTTTTGATATTCTTTAACGCCGTGTAGGCGAAGGACATTATTTTTCACAAAAATTAGTCAGAAAAGGTATTGATTTTATTGAAGTTTTTATTAGTTGTTTTTTTGATAAAAAACAGCACTCTTATCTCCAGATCACTTCTCTTTGAATTTTATTACTTTTATGCCAATTTTAAGTATATAATCGGTACAAATCCCTCTACTATGTATTGTTATGACTAAGATATCTTCGTTTCGTCAAAAACAGAGCATTATTTTTATTGCTTTTTTAGCCACTACGTTTATTGTCGGTATTGCAGGGGCGTTGCAATCGCCTACGTTAAGCCGTTTTTTATCGTTTGAAGTAAATGTTAATCCCCGTTTGGTGGGGCTGTTTTTTTCGGTGAATGCGTTAGCAAGTATTATTGGTAGCTTTTTATTAGCTAAATATTCAGACAAAAAAGGCGATAGGCGACATATTGTTATATTTTGTTGTTTAATGGG # Questionable array : NO Score: 3.21 # Score Detail : 1:0, 2:0, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTTTAACGCCGTGTAGGTGGTTTAGAAAT # Alternate repeat : CTTTAACGCCGTGTAGGTGGTTTAGAAAA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:58.62%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-0.40,-5.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [1-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [61.7-75.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,1.05 Confidence: HIGH] # Array family : NA // Array 1 210031-210541 **** Predicted by CRISPRDetect 2.4 *** >NZ_WTFB01000001.1 Gilliamella sp. Pra-s65 NODE_1_length_411236_cov_206.458063, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 210031 28 100.0 32 ............................ AATTGATGACTTACGTCTCGCAATGCTTCAAG 210091 28 100.0 32 ............................ GTTGCCAACGTTGAAAGCAAAGCTACATTAAG 210151 28 100.0 33 ............................ AAAGAAAAAAGCTCAATTAAGAGCCTTGAGGGT 210212 28 100.0 32 ............................ TATGATTCCGTAATGAACAGTTAACGCAACGC 210272 28 100.0 32 ............................ TCGCACCTCTACTTATTTTGGTCAAGTAGCAG 210332 28 100.0 32 ............................ TGAACTCCAAAGAATGATTGCTGATTTGCAAA 210392 28 100.0 32 ............................ ATCAAAGCAATACGAATCAAGCCAAAACTGTT 210452 28 100.0 32 ............................ TGATGTGACAACAAGCGATGCCGTTTTATTCA 210512 28 96.4 0 ........................A... | AA [210533] ========== ====== ====== ====== ============================ ================================= ================== 9 28 99.6 32 CTTTAACGCCGTGTAGGTGGTTTAGAAA # Left flank : ATTGCTGGCGACATCATCAGACAAACCCCAGCAGATATTGTTTATCACCGTATATCTGCTAACGCCAGAAAGCCAACCTTACTTGCGCCAGAATGGTGTGAAAACCACTGGCAATCAATGAATGCCGTTGATCATAATTTGCGTCAATATGGTGTTCAAGGCAGCGCCATTGGGGATGAGTATTGTTTTAAGGGATAGGGAAGTGATTTTTTAAAACATGATAAAATAAAAATTTTAATAAAATCAATTGCATTTCTAACTTCTTTTTTATAAAAAAGCATGCGATTACTGCCTAAAAATTATTTAGAAAAAGTGTTAATTTGATTAAATTTATTTTCTGTCTATTTTTTTTAAATGCAAAACTCGACGAACCCTTTTTTTTACGATAATTTAAAATTCAATAAAATCAAAATATTAAAAAATAGCTTAAAAAAAGGGTTTTCAAAGCCAAAATTGTTGTTTATCTTTATATAGCAAGATTTATCAAATCTTGAGCTCTA # Right flank : AATAAAATTAATCAGATAATTATAAATAATAATCGGCTATATTGTCTGTCGTATTTCGGCGTCAGAATGTGCCGACAACAGAGCGAGGTTAGCACGCTAAACAGGATGTTTGGCGAGGCTATTCTCTGTCTGGAGCGACAAATTTGTCTGGAACAAATTTGAACATCTGAGCATAGCGAAGATGGCCTCGTAGAGGCGAGTATCAGGATGATATGAGTAATCCCACAAACGGGTGCGTTAAGAGCGAGCGACGGCGGAGGGTAGCCGTAGACCACATTATGCAGACAATGCGTGGGGTTTTTAGGGGATTTTGAACTGCCCCCCAAAATTGGACGTGACCACAACAGCTATTTTGATCACCAAAATCCCAAACGTTCGAAACTACTATACCAATCCACTCTATCAACCAACAAAAAAACATTATATCCCACACAAAATTGTCAGAAAAGATATTGATTTTATTGATGTTTTTGTTTTGTTGTGATTTTAATAACTTAAAT # Questionable array : NO Score: 3.24 # Score Detail : 1:0, 2:0, 3:0, 4:0.98, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTTTAACGCCGTGTAGGTGGTTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:57.14%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-5.40,-0.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [73.3-76.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.78,0 Confidence: HIGH] # Array family : NA // Array 2 338985-339193 **** Predicted by CRISPRDetect 2.4 *** >NZ_WTFB01000001.1 Gilliamella sp. Pra-s65 NODE_1_length_411236_cov_206.458063, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 338985 28 100.0 32 ............................ GATATGCCGAATTGGTTTCTATCTGTCAGTTT 339045 28 100.0 32 ............................ GTTTGGTTGACTGGTTAGCTGATTATTACGAT 339105 28 100.0 32 ............................ AAAAGGCGCTAGAGTAACTATAAAATACAACT 339165 28 89.3 0 ....................AA..A... | C [339185] ========== ====== ====== ====== ============================ ================================ ================== 4 28 97.3 32 CCTTAACGCCGTATAGGCGGTTTAGAAA # Left flank : TTTGTGAACAAAATAGCTACAGTGACAACGTCCGAGTCAGGGAATTAAAGCGAATTCCCTGACAACCCACGCTTTGGCTGCTACGGCTAACCCTCCGCCGTCGCTCGGTCTTAACGCACCGTTTGTGCAATTACTCGTATCATCCTGATACTCGCCTCTACGAGGCCACCTTCTCTATGCTCAGGTGTTCAAATTTGTTCCAGACAAATTTGTCCGACGCCGAAACAAGACAACAACATAACCTTAGGTCTTTTTTGTGAGTTGTTTTTGTGTTAAAAAGCAATGCAAAAACCCCAAAAAAGTGGTCAGGAAAGGTACTAATTTTATTAAAGTTTTTTCTATCCGTTTTTTTGAATATAAACCTCTCCAAACCCTTTTTTTTACGATAATTTAAAGTTCAATAAAATCAATACATTAGAAAATAGCTTAAAAAAAGGGTTTTCAAAGTCAAAATTGTTGTTTATCTTTATATAACAAGATTTATCAAATCTTGAGTTCTA # Right flank : AATAAAGTTAATCACATAATTAAAAAGCAATCGGCTATGTTATCTGTTTTATTCCGGCGTCAGAATGTGGCAACAACAGAGCGAGTTTGTGGCGCGCTTGACAAATTTGTCTGGAACAAATTTGAACATCTGAGCATAGCGAAGAAAGCGAATATCAGGATGATACGAGTATTGCCGAAGGCCACATTCTGCAGCCAAAGCGTGGGTTGTCAGGGAATTTGCTTTAATTCCCTGACTCGGACGTGGGCACTGTAGCCATTTTGTTCACCAAAGGTCAAAACGTCAGAAACCACCGTACCAACCCCATTCTATGCACCAACAAAAAAACATCATTTTGATGAAAAAATTGGTCAGGAAAGGTGTTGATTTTATTGATGTTTTTTCTTGTTGTTTTTTAACAAAAAAACAACATTACGCCCCCTGATTTGTCAAAAACAACCCAAGTGATGGATTTTGCGTTTCGTTATGAAAACCATACCCCAAAGCTTTCAAATGCTGAT # Questionable array : NO Score: 2.72 # Score Detail : 1:0, 2:0, 3:0, 4:0.86, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CCTTAACGCCGTATAGGCGGTTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.57%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-7.30,-5.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-4] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [78.3-70.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.78,0 Confidence: HIGH] # Array family : NA // Array 1 86630-87077 **** Predicted by CRISPRDetect 2.4 *** >NZ_WTFB01000003.1 Gilliamella sp. Pra-s65 NODE_3_length_177032_cov_177.249233, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 86630 28 100.0 32 ............................ AATTATAGCAGAATTATGCAAGCATTATGATA 86690 28 100.0 32 ............................ GTTAACAGCGGGTTAAATCCTATTGTTCAGCT 86750 28 100.0 32 ............................ TGGTACGATAAATATTCGGAAAGTATAGTTAC 86810 28 100.0 32 ............................ TCGGGTAGTATTTGTAAATCATCATTACTAGC 86870 28 100.0 32 ............................ AATTTGGGATGGTACACAGTATACTGCGGTGA 86930 28 100.0 32 ............................ ATGACGCCGGAACGACCGTTTGGTGTGTATTG 86990 28 100.0 32 ............................ ATAGTCGAGAACCAATTTTTTTATCGCTGAAT 87050 28 92.9 0 .C..............A........... | ========== ====== ====== ====== ============================ ================================ ================== 8 28 99.1 32 CTTTAACGCCGTATAGGCGGTTTAGAAA # Left flank : TGGTAAATCGTCTAACAAAGCATCGTGATAAGTGATCATCTTCTTTGTGGTAAGTGATAAAAGGAGATTATTGTAGTTTTATTATGTGTTATAGGCAATAAGGGATATTTTGATTAAAAAACAAATAAAGGTTGATGATGATTTTTTCATTTAAAAAACCAAATAAAATCAATGCCTTTCCTGACTGTTTTTTTATGTAAAAAACACATAAATTACAATCACACATTACAACCAAACAAAGGTATATTTAATTATAGATTTTATTTTTTGATTTCCTAAATTTAAAAAAATCGTATAAAAATCGGTCAGGAAAGGTATTGATTTTATTAAAGTTTTTTCTGTGCGTTTTTTTGAACACAAACCTCTCCAAACCCTTTTTTTTACGATAATTTAAAACTCAATAAAATCAAAATATTAGAAAACAGCTTAAAAAAAGGGTTTTCAAAGGCAAAATTGTTGTTTATCTTTATATAACAAGATTTATTAAATCTTGAGTTCTA # Right flank : ACGGGCACATTTGGCAACAGCTGAGCACAGTGAAGATGGCATCGTAGAGGGAGTATCAGGATGATACGAGTAGCGTAGCCGAAGGCTACATTCTGCAGCCTTGCGAGGGTTTTTAGGGGATTTCGCAAAAAATCCCCTAAATCGGATGTGATCACAACAGCTATTTTATCCACCCAAAGCCTAAACGTCCGAAACCACGGCACACAACCCATTTTATGCACTAACAAAAAAGAACTATTTTGATAAAAAAGCGGTCAGGAAAGTTACTGATTTTATTAAAGTTTTTTTGAAAATTATTTTAAGTAAAATCAGCTGTTTATATAAACTCGTATTAATCAATGGTTCAAATAAGAGATAATTTTGCCTCAAATTTTTCAAAATAGTACATCTATTTATTTCATATTTGAAGTTTTTAAAAGCGACATAAGTCGCTTTTAATCTTTGAATGAGTCAGTCCATTTTCCTGTATTAGTTGGTTCACTAGTTGTTAGTTGTTAGTT # Questionable array : NO Score: 3.21 # Score Detail : 1:0, 2:0, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTTTAACGCCGTATAGGCGGTTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:57.14%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-7.30,-5.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [78.3-46.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [1.05,0 Confidence: HIGH] # Array family : NA // Array 1 13050-12722 **** Predicted by CRISPRDetect 2.4 *** >NZ_WTFB01000005.1 Gilliamella sp. Pra-s65 NODE_5_length_147122_cov_234.614056, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 13049 28 100.0 32 ............................ ATTTGTCAGCGATTGTTCTTAGCGACTTAAGC 12989 28 100.0 32 ............................ TTTAAGTGCTCTTAAGAACTCTGACATTTCAG 12929 28 100.0 32 ............................ ATTCGGGTAACTATCCCTATGCCGTCCCCCTC 12869 28 100.0 32 ............................ GATGGTGATAGGGCAACCACTAAAATTACATT 12809 28 100.0 32 ............................ AGCATAAGCCGCGCGAATTTCAGCATCTGTTA 12749 28 92.9 0 ...........C.........G...... | ========== ====== ====== ====== ============================ ================================ ================== 6 28 98.8 32 CTTCAATGCCGTGTAGGCAGTTTAGAAA # Left flank : AAAGCAGATATACAGCAAAAATCATCGATTAGTGATTATGCTTTATTGATGGCTATCACAACAGTACCGACGACGATAAAAGGCCATTTACGTTTTAGTCGTGTTAATCCTAAAGGTCAGAGTGCGTTAAGACGTGCTGAAAAAAGATTAACAGCACAAGGCAAATGGACGCCTGAAGTGAAAAATAAAATGGTTGAAAAGTGGGGAAGTGTTCATTTGCAATACCCACATCTCCATTTGAATAGTAAAAGTACAGGTCAAAGATTCATTTTGTGGTTAAAGCAAGAAAAATGCCCAGAGCCTGTGCAAGGCACATTTAATAGCTATGGACTAAGCCAAAACGCAACAGTTCCTGATTTTTAAATCATTAACCCTTTTTTTGAGGATGATTTTAACATATTGATTATTATTAATATTAAAATAGACTCAAAAAAAGGGTAAAAATTGGGAAAAGTGCAGTATGCTCTTTTACAATAAGGCATTATTGAAATAAAATTCTA # Right flank : ATTATTTGAAAACTTTCGGACTGAATTTTAACCATTATCATAACTATTCTGCCCCAATTTGCGTACTCACTTTTATTTCTCGATTATCAGTAATTTCTAAATTTGACAATACCGCTAATTGAGGAAAATTAGGTCTTAAAAATTGTGAAAGCATTGGTCTTAATGTATGGTTTACTAATAATACTGGTGGTGCACCAATTGCCTCTTGTTGATTAAGCGCTTTTTGCAGTTGCTCAATAATATGTTCAGCAAGCCCTGGTTCAAAATTGCTAGTATTTTGGAGAGCTTGTAATAATAAACGTTCTAAATTAATATTTAACCCTATTACATTGATTGGTGCTGTACCGGGGAACCATTGCTGAGTAATTACCCTACCTAATGCGATTCTTACCATACTAAGTAATTGATAAGTGTCACTTTGGGTTGGTGCATGCTCGCAGATTGTTTCAATGATAGTTCGCATATCTCGAATTGAAACCTTTTCTGCGATCAAGTTTTGC # Questionable array : NO Score: 6.20 # Score Detail : 1:0, 2:3, 3:0, 4:0.94, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTTCAATGCCGTGTAGGCAGTTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:57.14%AT] # Reference repeat match prediction: R [matched CTTCACTGCCGTGTAGGCAGCTTAGAAA with 93% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-4.80,-5.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [2-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [71.7-73.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.28 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 1 53160-52831 **** Predicted by CRISPRDetect 2.4 *** >NZ_WTFB01000009.1 Gilliamella sp. Pra-s65 NODE_9_length_97155_cov_178.291944, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= =============================== ================== 53159 29 100.0 31 ............................. GCTTTTCATATAAACTCTGTTTTGTTCCGCC 53099 29 100.0 31 ............................. GCTTGGTACATCGATTGACGTTAAGGCTGCT 53039 29 96.6 31 T............................ TACACTCCTGCAACTAAGGCGTGGAGTGACA 52979 29 100.0 31 ............................. TCGGTCAATTTGACCGAGCAGGTTTTTTTTG 52919 29 100.0 31 ............................. TAGGCAAGCTAAGTTTAACCGACAAATAACA 52859 28 86.2 0 C..............-......A..A... | A [52837] ========== ====== ====== ====== ============================= =============================== ================== 6 29 97.1 31 ACTTTAACGCCGTGTAGGTGGTTTAGAAA # Left flank : ATTTCCTTTCTGAACTAAAAACCCAACACGCTAAAGCTATGCTAATACAACCCCAAGTGGCAGGAACCATTAGCGTTACCCCCAAAACTATTGCACAAATCCAAGGCATCCAATTTCAAGCTAAAGCAACTCAATTACAAAATGAACAAGCCAAGCAAGCCTATGGACAATATTATCGAGCGTTTCCTTTTGCAAGGGTTATCAAAGCACCAATTTGGGAATTAGAACTACAAAGCATAAAAATGACCAACAACTTATTAGGATTTGCTAATAAAACGCATTGGGTAAAACAACAAGACATATAAAACAAAAAAACTATTGTCTGCCTTCAAAAGTTTTTTAGGCATTTTTTTGAATACAGAACCCTACAAACCCTTTTTTTTACTTTAATTTAAAATTAAATAAAATCAATCTATTAAAAAATAGTTTAAAAAAAGGGTTTTCAAAGCCAAAATTGTTGTTTATCTTTGTATAGCAAGATTTATCGAATCTTAAGTTCT # Right flank : ATAAAATAAATCAGTTAATTATAAAAAATAATCTCAAAAAATAATTGGCTATTTTGAACCCCCAAAGTCCAAACATCCCAAGCCACCGCACCTAATCCATTCTATTCACTGCCAAAAAAGGTATTATTTTTTACAAAAAAAAGGTCAGGAAAGGTATTGATTTTATTTAAGTTTTTGTTGGTGATTTTTAACACTAAAATCCCCCCAATAATCTGCTCTAAAAACCTCCACTAAGCGGCTATGATTCAAGATAGCATTAGTCACAACCCTAATTCTACGTTAAAATAACTAGCGTTATTACGCTAAATTACCAAGGAAATCGCATGACAACTGAAATGACAACACTCGACAAAATCAAAAAACAAATTGCCGATAACCCAATTATTTTATATATGAAAGGTTCGCCAAAATTGCCAAGTTGTGGCTTTTCGGCTCAGGCAGTGCAGGTTTTGTCGCAATGTGGTGAAGCGTTTGCTTATGTTGATATTTTGCAAAACCCT # Questionable array : NO Score: 3.11 # Score Detail : 1:0, 2:0, 3:0, 4:0.85, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ACTTTAACGCCGTGTAGGTGGTTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:58.62%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-0.40,-5.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [5-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [83.3-73.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,0.78 Confidence: MEDIUM] # Array family : NA //