Array 1 621042-622399 **** Predicted by CRISPRDetect 2.4 *** >NZ_GL872307.1 Streptococcus sanguinis SK353 strain CCUG 59324 SCAFFOLD1, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 621042 36 100.0 30 .................................... TGGTTCTGGTGGTGGACGAACATTCTATTT 621108 36 100.0 30 .................................... GCGAGACAATGGCGTTAACACTCAAATTTA 621174 36 100.0 30 .................................... AAAATCAACAGACAAAGTCACAACTGGTAA 621240 36 100.0 30 .................................... CAGGAGTTTAGGTGGAGAGTGCTAGCCTAG 621306 36 100.0 30 .................................... TAATAAAAATTGCAATCATGGTTCCAATAG 621372 36 100.0 30 .................................... TACTGAGACGGCTTATTTAGCTTATAGAGT 621438 36 100.0 30 .................................... TGGTCGGAAAGCGCAGCGCTCTCTCGGCTC 621504 36 100.0 30 .................................... ACAGCAGCCAGCGCCACGCTTCACACCAGC 621570 36 100.0 30 .................................... TCCGATAGTTCCGACGAATGTCGCAAGGGC 621636 36 100.0 30 .................................... CTCTTGCGTCTGATGAGATATTTAAGGGAA 621702 36 100.0 30 .................................... GCTATCGTAGGTTTGAGCAACAAACTTACG 621768 36 100.0 30 .................................... ATTGCAGATTATGCATGTAAGGCAGAGGGC 621834 36 100.0 30 .................................... CAGACACCTTCTGTAGTATCACCAACTAAT 621900 36 100.0 30 .................................... TTAATGTTGAATTTCTTCCTATAAAATTCT 621966 36 100.0 30 .................................... TATTACAGATACTGGAGAAGGTGGATACTT 622032 36 100.0 30 .................................... TGTCAAACTGGTTTATCTTATATTGAAGTT 622098 36 100.0 30 .................................... ATAGACTTTGATAAGTCAGCAAAGAAACTT 622164 36 100.0 30 .................................... AGTTGTTGGACCTATTGAACAACAGGTTTT 622230 36 100.0 30 .................................... GGGGGAATATAAAGAGTGGTTAGATGTTAA 622296 36 100.0 30 .................................... TTCAGGATTAGAAACGATGCATAGGTGTGA 622362 36 83.3 0 ......................TT.T...AT....A | TT [622384] ========== ====== ====== ====== ==================================== ============================== ================== 21 36 99.2 30 GTTTTAGAGCTGTGTTGTTTCGAATGGTTCCAAAAC # Left flank : ATCAACTTAATGATAAACCTGAAGTAAAGTCAAAAATCGAACAGTTGTTAGCTGAGATTACAGAACTGCTGGGATTTGAGTGTTTGGAAAACGAATTGGATCTAGAATATGATGAAATCACTATCCAAGAACTGATTGATGACCTTGGTGTCAAAGTCGAGACCATGAGCGACACACCTTTTGAAAAAATTTCAGAAATAATTCAAGTCTTTAAATATCTCTCAAAAAAGAAACTACTAGTCTTCATTAATGTGGTAGCTTATCTATCAAAAGAAGAGTTGGATAGATTAATCGAGTATATCCAACTAACTCAACAAGATATTTTATTTGTCGAACCTAGAAAAGTCTACGATTTTCCGCAATATGTATTGGATCAAGACTATTTCTTAAACCCTGAAAATATGGTATAATAAGAGTAATAAATGGAATCAAACGAATTGAAGTCTAGCTGAGATAAATAGCGCGATTACGAAATTTCGTAAGAAAAATTTTTCTGCGAG # Right flank : AGGACTGAGTAAATCAGTCCTTTTGTTCTCTATTTCCCCAAGCAAAATTGGCTGAAGAGTTGGGTGATGAGTTCGTCTGGTGCAGCGTCACCAGTGATTTCGCCTAGGATTTCCCAGGTGCGGGTCATATCGACTTGGAGAAGATCTACTGGCATGCCCATTTCCAATCCTTGGTTGACGGCTTGCAGACTTTCTAGGGCTTTTTCAATCAAGGAGATATGGCGGGTGTTGGATAGGTAGGTAGCGTCTTGCTCTACGATACCAGCATTTTCAAAGAAGAGCTGATTGATGCGTTCTTCAATTTTATCGATATTTTGATTGTGGAGGACAGAAATCTTGATAGCATCTGCTGGCAGCTGGTCTAGCTCAATCTTTTCTTCAAGGTCAGTCTTGTTAAGCAGGACGATGCGATTACTGTCTTGGCTGATTTCCAGCAATTGTCTGTCCTGCTCCGTCAGAGACTCGCTGGCATTAAGAACTAAGAGGACCAAGTCAGCTTC # Questionable array : NO Score: 6.22 # Score Detail : 1:0, 2:3, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAGAGCTGTGTTGTTTCGAATGGTTCCAAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:61.11%AT] # Reference repeat match prediction: F [matched GTTTTAGAGCTGTGTTGTTTCGAATGGTTCCAAAAC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-4.70,0.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-8] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [65.0-60.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0 Confidence: HIGH] # Array family : II-A/C [Matched known repeat from this family], //