Array 1 16436-15607 **** Predicted by CRISPRDetect 2.4 *** >NZ_FQZP01000023.1 Thermoclostridium caenicola strain DSM 19027, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ==================================== ================== 16435 32 100.0 34 ................................ GTGAAGTGCTGGAAAGGATGCACAGGCATGCGGA 16369 32 100.0 34 ................................ GAGGAAACCGACAAACAACTTATTGGCTTGATGA 16303 32 100.0 34 ................................ TTTTCAAGTTTTAAAATTGCCACCAGTTGGTCAA 16237 32 100.0 36 ................................ CTGGGCGTGCTTGGTGACTTCTTCGACCGTCATAAA 16169 32 100.0 34 ................................ GACCTCGACCCTGGGGTTCTGCTTGTCGACACGG 16103 32 100.0 33 ................................ TATTACCACTCAGGGTAATGTCCGCGAGGGTGT 16038 32 100.0 34 ................................ TGTCGTCAGCAAAATCAATCTTTTCAACAACGAC 15972 32 100.0 34 ................................ GTTTGTAGATTGTGATATATGGACTGTTAGCATG 15906 32 100.0 34 ................................ ATAATTACAGAGCTGCATTAGCGATACTGAAAAA 15840 32 100.0 35 ................................ GTAGAGATAGATCGTGATAACAACCGTGGCAGAAA 15773 32 100.0 36 ................................ TTCTACAAAACGCTGATAGGCTATTTCACCATCAGG 15705 32 100.0 35 ................................ TCGGATTTGGGGCTCTTGCGAAACACGCCGGCCAC 15638 32 81.2 0 ..........................CCGGTT | ========== ====== ====== ====== ================================ ==================================== ================== 13 32 98.6 34 GTCACAACTCCCATGTAGGCGGAGACTGCAAC # Left flank : GAATGATGTTGCCCATCTGGATCTGATGCGGAAAAACGGATGGCGGTTGGAGGCTGGCAAAACCTGCAGCGTGATGGAAGATTACATCAACCGTTTGAGGTTTCTCCTGTCCTATGACCAGAAACGCATGAACGCCGTCACCAAGACCTTGCAGCAGATATTTGATAGGCATAAAGTCAAAATCCGGTTCACCGTGGAGAAAGGAGGAATGCTGAAGATAGAGGATGTGACTGCCGACAAGATCGTGCATCTGAAAGGTTCCAGGTTGAGCGGCATTGAAATTCCAAGTCACGGGGAGAGGTTTATTGACACGTTGAAAGCGCTGATGGTATACCCGAGAGGATGAAAACACCTTTTTGTAGGGTGATTCGCACCTGGCATCCATAAAGGCTTTTAGCATTTTTCGGGGGAAAATGGGCATAGGTTTTTGGCAAAGATGAGAGGGATTCGCACTTTTGAGGCCTGTAACCCTTGTAGGAAAAGGGTTTCACAGAACAGCT # Right flank : CACGCAGGTTGGACCCAGGACTCCGGCTTGCCTTTCTGGAACGTGCGAAACGGGAAAAAGTCATAAAAAACCGTCGGTGAAGTGTTCCGCCGGTTTTGCTAGCAGGATGACATATGAATCGGGGAAATACGGACATTTCAAAGCGGCGATGGAATATCGGCCCATCGCCTTTTTTGAAGCATTTCTGCTGGCTTCCGCTTAATGATAAATCCCGATCAGGACGATATATAAATAGAGCAAGCGCGTTGTTTTCAGGCTGCAGAGGATTCTCTGCGCAGGAAGATGGCGGTTGTATCCGAGTAATCGGCCCTACGTGTCATAAGACGGGGTGTTGATCATGAAGCGCGAACGGATCATCAAACTCCTGCTTGTGGGAGTCATCCTATTCTTTGTCGTAAGGTTTGGCATTATACCCATGCTTTCGGGAAGTGCCTTCAAGGAGTACCTGGGCAGGATAACCGCTGATAAATACAATTTTTCCGAAAACGAGTATGCCGTTA # Questionable array : NO Score: 3.19 # Score Detail : 1:0, 2:0, 3:0, 4:0.93, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCACAACTCCCATGTAGGCGGAGACTGCAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [5,9] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-4.50,-3.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [6-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [41.7-51.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,1.05 Confidence: MEDIUM] # Array family : NA // Array 1 7919-6596 **** Predicted by CRISPRDetect 2.4 *** >NZ_FQZP01000030.1 Thermoclostridium caenicola strain DSM 19027, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================= ====================================== ================== 7918 33 100.0 34 ................................. CACTCCGTTACACGATTTTTTACACGCCTTAAGT 7851 33 100.0 37 ................................. TGCTTTGCGTCCTCATAGGTGTATGGGATAGATGCGC 7781 33 100.0 36 ................................. CTGCATAGCCTGAAGCAATTCCATGAAAACATCCAT 7712 33 100.0 35 ................................. CAACATTCTTGAGAGTGATATTCCCTCGATAAAAG 7644 33 100.0 35 ................................. CTGTGGTGCTGGCTCCACAATACGCAGCATATTTC 7576 33 100.0 34 ................................. ATTAAGGGGGAAGGTCAGGTGATACTTGAAGGGC 7509 33 100.0 34 ................................. AATGCTGTATCTGCGTTAGGCCCGAGGTAGTATT 7442 33 100.0 36 ................................. GTGAAGGTGTCCTGGATGATATGCTGGCCATCGCAG 7373 33 100.0 34 ................................. TGGCGAGGTCATTAAAGTTTATGACACCACAAAA 7306 33 100.0 38 ................................. TTTGGCTTCCAGCGCAACAGCAGAATTGAAGTTGTGTT 7235 33 100.0 34 ................................. GGACGACAACAAGAATATACGGCGCAGAAAGTAT 7168 33 100.0 34 ................................. TTGTGGTGTTGTTGTTAATCATAGTTTTTCCTTC 7101 33 100.0 35 ................................. ATCAATTGCTTGATGTTTTATTTTGCATAATTCAG 7033 33 100.0 34 ................................. CTTGATTTTTTTTGCGCGTAGACTTGTTATTCCA 6966 33 100.0 35 ................................. TTCCCAGCCGAGCTGTTTCCGTATGTGATTTACGA 6898 33 100.0 33 ................................. GTCCATCATCATCAGAGAGGTACACCATGATAA 6832 33 100.0 36 ................................. ATTTGCTCATCAGTGAATGTGCTCAGCAATTCCATG 6763 33 100.0 35 ................................. GAGAAATAGAGTGTTTGCAACGTCAACTTGACCGG G [6738] 6694 33 97.0 34 ..............................T.. AAGGTATATACATCCTTGTCGTTTTGGACAACCT 6627 31 84.8 0 ..........-.......CA.......-...G. | C [6621] ========== ====== ====== ====== ================================= ====================================== ================== 20 33 99.1 35 GTTGCAATTAGCGCTCCGTGAGGGGACGAAAAC # Left flank : TGCTTTTCCCATCGGTGGAGCATATCGTAGGAAGCCTGATAAACAAGTGGAACATGTATTCGGGATATATCAAGATTGAGGACAGCGATGCGCAGAGGTTTCTAATAGACGGCATAAAAATAGATTCATACAGGCTAAAGAGCAGTTATTATCACCTTAAGGGCGCAGTCATACCAGGCTTCATCGGGCACGTTGTTCTGAACTCCAAGCTGCCGGCCCCCCTGCAGGAGATCTGGCATCTGCTACTGTTCTTCTCGTCATACTGCGGAGTCGGCATAAAAACATCACTGGGCATGGGAAGCGTCCGTACCAATGATTATGTTAAGAAAACAGTGCGGATATCAAGTGAACAGGAGAAAACGGAGGGATTCGCACCGGGCTGAAATAAAGGGGTTTGTGTGTTTTTCATGGAGTAGTCCGGATACATTTTCAGTGATAAATTATCATTCGCACTTTTGAGGTTTGAAACTATTTTATGATGCTGGTTTTATCTTCAAGCC # Right flank : ATTTGCATGAATACTTTTTGTAATGTATACTAAAACAAGGATAATAAAGAGGACGACATGAACAGCTTGCTTAAAGCCTTCTATTTGCATACTATGCTGGCTTCCATGTCCGATATCGTACATGATACAGCGGCTTACAGGCATGCTATGTGAATAGAGTGGTAATTTAAGTAAGCCGCACCAATAATGTGTTGTACCCGGGTAGGCTTGCCCGGGTTTTTTGTTTTGATCAAAAGGTTCCGGAACACCGTGTTGGTGATTGTTGGCCGATATTTGGCGAAGGAACCTGGTTCAATGACAATTCGGGTATGTCACACAGAACCACTGCGGACAGGACTTGAGGCTTACTCAAGTCCTTTTTTTCGGTGTTGATGTGATTAAGCAACAATGAGATTGCTTCGTCGCTACGCTCCTCGCAACGACAAACTGGAAGTTAGAGGAATGAAGTGTTTTTGCGAGCGAAGGGAAACAGAGCGCGGCAGTCGCCTGACACCCGCAGT # Questionable array : NO Score: 3.21 # Score Detail : 1:0, 2:0, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGCAATTAGCGCTCCGTGAGGGGACGAAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [6,9] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-2.90,-6.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [8-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [71.7-66.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,1.15 Confidence: HIGH] # Array family : NA // Array 1 46160-52790 **** Predicted by CRISPRDetect 2.4 *** >NZ_FQZP01000012.1 Thermoclostridium caenicola strain DSM 19027, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================= ===================================== ================== 46160 33 100.0 34 ................................. TATTTTGGGGCTGCTCTGCAAATTTTTTTTTAAT 46227 33 100.0 36 ................................. ATTTGTGCTGACAACCAACCTGCCACCGCCAAATAT 46296 33 100.0 33 ................................. TCGGATTTGGGGCTACGTTTGAACACACCGGCC 46362 33 100.0 34 ................................. ATAGGTCAAATATGTATCCTTATGCGTCATACTC 46429 33 100.0 36 ................................. ATCAAGCGGACGCTCAGGGGGGCATAGCCCATGAAC 46498 33 100.0 33 ................................. TGTTTGGTTACTGGTAAGGTGATTAATGTACGT 46564 33 100.0 34 ................................. CGATGTTGATGGACGCAGTAACTCCTGCAAATCC 46631 33 100.0 35 ................................. ATTTTTGAGCTGATTTGATAAAGCATCCAGCCCGG 46699 33 100.0 34 ................................. AACGAAATCCCAAACCTTTTTGCTTCCTCTCGCA 46766 33 100.0 36 ................................. ATCAATAGCAAATGCAAAACCAGCAAGCGGATTAAC 46835 33 100.0 36 ................................. TTCTCTCCAGGTATGAAATATAAATGGTGCTGCAGA 46904 33 100.0 34 ................................. GCTATATATGTCCGGCATGATAAGTATGGCTAAA 46971 33 100.0 34 ................................. CATCAGGCAACCAAGCGGTGACTTTGTGTTGTCT 47038 33 100.0 34 ................................. GCTCTCGCAAGTGGAAAAGAACGGGACGAACACT 47105 33 100.0 34 ................................. CATCTCGCCGAAGGAATATGCAATCTCAGGGGGA 47172 33 100.0 35 ................................. ACCTACAAACTTAGCAACCAATGATACGTTGCCCT 47240 33 100.0 35 ................................. GGCACTTTACCTTTGAGCCTGTACCCCTTAGCCCG 47308 33 100.0 34 ................................. AGCTCTCGACTTAAAGTATTTTGCGTCCTGTTTA 47375 33 100.0 33 ................................. ATTTGGATATAGGATAACATATCTATGGCACTT 47441 33 100.0 33 ................................. ATCAAACGCACGCTTAGGGGTGCGTAAAGTTTG 47507 33 100.0 35 ................................. CACTCACCATTGTAGTACCAAACTTTTATAAGCGT 47575 33 100.0 35 ................................. ATAAAACCACAAAACAATATGTAAATTGGTGTATT 47643 33 100.0 34 ................................. AATAAAGTTATCCGCTCTTACAGTAAACAAATAT 47710 33 100.0 36 ................................. TTCTTTTGTCAAAAACACAGTTTTGCCGATGTCGTC 47779 33 100.0 33 ................................. TTAACTATCACCCATAAACTACCTAAAAATATG 47845 33 100.0 35 ................................. CGGGTTAAGGGTTACAAGTTAAAAGGCAAAGTGCC 47913 33 100.0 35 ................................. ATCAAGTACAGCTGTAAGATCTACACCGGTCAAAT 47981 33 100.0 34 ................................. AGGAGGGCCGCGACCTATTGAAAAATAGTATGCT 48048 33 100.0 36 ................................. TTTTGTTGAAGGTTCAATTCTGACATAGATTCTTTC 48117 33 100.0 33 ................................. ACGAAACTATCAGACCCATCAACATTACCAACG 48183 33 100.0 33 ................................. GTAATTGTACGCACAATGACGCACAATATAACC 48249 33 100.0 36 ................................. TATGGAATCATACAAATACTCCTTAAGGACGCAGGC 48318 33 100.0 33 ................................. GCCACCCTTGCCTACGAGAGCCGAAATGACAGC 48384 33 100.0 34 ................................. ATTTGTCAACGAATATAGGCATTATATGGTAGCA 48451 33 100.0 33 ................................. AATGAATGCGCTGATAAATCTTATATTGTATGA 48517 33 100.0 33 ................................. TAGCATAGGTCAATGGTTTTCCAATCTTATTTC 48583 33 100.0 36 ................................. CTCAAGGTATTCCTCGAACTCTGCCTTTAACGCAGG 48652 33 100.0 35 ................................. AATTGATGACATTGCTCTTTGTTGTTGCATATACG 48720 33 100.0 36 ................................. CAACGCTGTATCATCTCAACAAGCGCTATTGTCTTT 48789 33 100.0 34 ................................. CATATTACATGGAAATTTGTCACAGCGAACCATA 48856 33 100.0 34 ................................. CCACTATGGCTTTTCTCTGCTTACGTTGCTGAGA 48923 33 100.0 33 ................................. AAGAGCATGGACTGCACCTTTTTTGCGGTGAGC 48989 33 100.0 34 ................................. TTGTAGAAGGAAACCTCAGGAACAACGTTTATGA 49056 33 100.0 34 ................................. CCGGTTGATACCGGTACGCTCGGAGAGCTTGTCA 49123 33 100.0 37 ................................. ATGATGTCCTTGATTGCCTTGCAATGGTCCTGGTGCT 49193 33 100.0 34 ................................. TTCTATGCTCCATCCACGAGAAAGACGAAGTTGC 49260 33 100.0 34 ................................. ACCTACATACTTTACCACCAATGAAATATTGCCC 49327 33 100.0 33 ................................. CTGGGGTCGGCGGCCTTGGCCTGAATATCCCGG 49393 33 100.0 37 ................................. CACTTGTCTGTCATTAGCCTTATATCTAAACCTTGCG 49463 33 100.0 34 ................................. CACCCTGCCCCGTATTCGGGACGTTGGATTGTTG 49530 33 100.0 35 ................................. ACTTTTTGGGCTGCGCTTGAATACGCCGGCGACAA 49598 33 100.0 34 ................................. TGCTCGTGAGCTGAACCCGCTTATAGAGGCAGGC 49665 33 100.0 34 ................................. CTACCGCATGACGATACAGAACGGCGTCTACGGT 49732 33 100.0 32 ................................. TTGCCGGTATGGCAAAGATAAACGAATTCATG 49797 33 100.0 34 ................................. GACCAAGGTACAGTTTGCAGAGCCTAACGAAAGC 49864 33 100.0 34 ................................. ATTCCAGGGAGAATACAAATCCACCATACATTGA 49931 33 100.0 36 ................................. GCTCTCGCAAACGGCGCAGTGGTGCAAAGCGATCCG 50000 33 100.0 34 ................................. AAGCAGACGGCACAATGACGCACTCGTGCAGGAA 50067 33 100.0 36 ................................. ACGGTCAGCACCGCTAAACCACAGAAACCGAGTTTC 50136 33 100.0 33 ................................. TCTCCGTCATAATCACCACCCTATCAGGTTTTT 50202 33 100.0 33 ................................. ACTCCAACTATTATAGGGCTTACCACTGCAGGG 50268 33 100.0 34 ................................. TTAAATAACCGCTTAAGTTTTAACATCTCTTTTT 50335 33 100.0 35 ................................. TGTGGTAAAATGTATAATGAGTAAACATGACCGCA 50403 33 100.0 36 ................................. CACCTGATTGAAGCCCCGCTGTGCGGAGCGGGGCGG 50472 33 100.0 34 ................................. TTCTTCTATCTGCTCCCATGTCAGCCCATTCACA 50539 33 100.0 34 ................................. TAAGAGAGGCAGCAAATCCGGACAAGCCGTTTTA 50606 33 100.0 34 ................................. CTATCAGCGAGCGGAATAACGCCTGCTTTTCCGC 50673 33 100.0 35 ................................. TACAATGCAAAAATGCTGGCGTGCCCATATTTGTT 50741 33 100.0 36 ................................. TACCATTGGGGGCCGCATGACTAAGATTGAAGAGGA 50810 33 100.0 34 ................................. ATCGACCTGGCCGCAGAAGTAACCGTCAGGGCCC 50877 33 100.0 34 ................................. GCATTCGGAGCCGTAGGTCGGGGGTTCAAGTCCC 50944 33 100.0 37 ................................. CATTCCTGACCGCGTCCGAGAGGCAGCGCGGCATTAT 51014 33 100.0 34 ................................. CGCAACGCTCGCACAAACCATGTTTTGATATAAA 51081 33 100.0 33 ................................. CAGAATATAGTTTGGATGGCTCATTTTCTCGAC 51147 33 100.0 33 ................................. TTACAAAAACGGCGTAGGTTACGGAGCGTGGAC 51213 33 100.0 35 ................................. TTACAAAAACGGCGTAGGTTACGGAGCGTGGACGC 51281 33 100.0 33 ................................. GCTGGCTGCCGCTTTTATACAGGATTGATGACG 51347 33 100.0 35 ................................. ACCTTTGGACAAAGAACTATATAAAGAACTGCTTC 51415 33 100.0 35 ................................. CCCGGCAGTACAACATCAATTAAAATATACTGGAA 51483 33 100.0 34 ................................. TGCGGTCCTCGGCGGTCTTGATCGCATGGTGTTT 51550 33 100.0 35 ................................. ATCCTCGTCCAACCTGCTGACCGCCATTCTGGGAT 51618 33 100.0 34 ................................. AATCCTCGGTCTCCGTTTGTCCACCCTGAACCTG 51685 33 100.0 34 ................................. TTCGGAGGAGTTTAAAAATTAAAATTTGAGAAGG 51752 33 100.0 34 ................................. TTAAGGTTGAAGGGCTAGAAGGATGCCCTATCAC 51819 33 100.0 35 ................................. CTCCGAGCCAACGACATGCGCCGGGTCCAGGAGAT 51887 33 100.0 33 ................................. AATTATTATACGCAACTGGTGAAACCAAGCAGG 51953 33 100.0 36 ................................. CTTTTTTCGCGGGAAATAAAAAGCATATGCTTACAA 52022 33 100.0 33 ................................. TATGTAAAGCCTAACATAATGCAGATGAACACC 52088 33 100.0 33 ................................. CATTTCATTACACGATTTTTTACGCGCCAAAAC 52154 33 100.0 34 ................................. CGCCAGAGATGATAACTGAGATTTCGCAACAACG 52221 33 97.0 34 ..........................G...... CCCCCGGTAAATTAACTGTAAATGATGGTGGCTC 52288 33 100.0 35 ................................. ATCCTCGTCCAACCTGCTGACCGCCATTCTGGGAT 52356 33 100.0 34 ................................. CCTTTCCCCAGCAAGCTCTACGCGTGCACCTATG 52423 33 100.0 34 ................................. ATCAAGGGCCTCATTGTATACCTCAAGCTCCTGC 52490 33 100.0 34 ................................. TTGCTGGATATTGTCCATTGAAGCCTTGAATTCC 52557 33 100.0 33 ................................. GTGCCCTTGTTGAAGCTGAGATTGCCCGTGAGC 52623 33 100.0 35 ................................. AAAACGCAGGTCAAACAGGCAGACATGACGTGGGA 52691 33 100.0 35 ................................. ATCCTGGATGGGCTGGTCCAGGTCGGGGTAATCCC 52759 32 78.8 0 .C....-...T.GC.......AC.......... | ========== ====== ====== ====== ================================= ===================================== ================== 99 33 99.8 34 GTCGCTCCCCGTATGGGGAGCGTGGATTGAAAT # Left flank : CCAATATCCTCCATTCTTATGGAAATAGGTGATAGTATGTTGGTATTAATAACTTATGATGTTAATACAGAAACAGAGAGTGGAAAAAAGCGTTTAAGAAAAGTAGCAAAGCAATGTGTAAATTATGGGCAGAGAGTCCAAAATTCTGTATTTGAATGCGTTATGGATGAGGCAAAATGCAGGCAAGTAAAAGAAATACTCCTAAAGATAATTGATGAGGAAAAGGATAGCTTGAGGTTCTATTATCTCGGAAATAATTATAAAGGTAGAGTGGAACATTTCGGCGTTAAGAAAAGTTTTGACATTGAAGGTGATCTTATTCTTTAAAGTGCGAATGGTATGCTTACATAAAAATCCTGGATGATTCGCACCAGGGTTATAACAATTAAATGTTATAATATTACCATTAGTACCTTGAAAAAGGAATATTTTGGTGCCAGATTTAAAGAAATTTTGTGCCGCCTATACAAATACATATTTATTTTTTGTCTATTTTTGCT # Right flank : TAGGTTCATCATAGGTGTAAAAGAAAAAGGTGAGTGTCGCTCCCCATATGCTTATCTGTGAGGTGATAAATTCAATCGATTCCAGGAAGGAGGAAATGGTTGATGCATTAAGTTGACAAAACCTCATATTGACCTTATCATATTATTTGCATCAAATCATGCGGACATGGCGGAATTGGCAGACGCACCAGATTTAGGATCTGGCGGGAAACCGTGGGGGTTCAAGTCCCTTTGTCCGCACCAAGTGAAGGGAAAACCCTTCACTTTTTTGTATGGACAAAGGGGCTTGAACTTTCGGCGTCGCAGGAGACCGGAGCGTAAGCGAGGGTCGAATCAGAACCGCCGGCTCAGCCGGCGGTTTGTTCTGCCCCTATAAGGGGCTGTTACCAGCAACATCTCAAGATGTACTGAATGAGTTTGCCAATCGCACGTTTTTTACTCACTAACACTAAAGGGTTTATCTTTTGTGTTTGTTTACTGGCTCACCCGTAAACGGGTCT # Questionable array : NO Score: 9.25 # Score Detail : 1:0, 2:3, 3:3, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCTCCCCGTATGGGGAGCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: R [6,8] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCGCTCCCCATCCGGGGAGCGTGGATTGAAAT with 91% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [-8.50,-8.40] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-8] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [76.7-58.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [9.68,0.37 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //