Array 1 60622-60401 **** Predicted by CRISPRDetect 2.4 *** >NZ_JADNKU010000009.1 Fusobacterium varium strain 1001254B_151014_B5 NODE_9_length_79590_cov_18.6252, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ==================================== ================== 60621 29 100.0 36 ............................. ATTCTTGAAATGTCAATTTTACTAGCTTTTAGACAA 60556 29 100.0 35 ............................. ATAGTTTTTCCTTCTGTATCTGTTGCTTGAGGGAG 60492 29 100.0 34 ............................. TAGCATCTAAAGCATGGATAGATTTTACACAGGG 60429 29 96.6 0 ...............A............. | ========== ====== ====== ====== ============================= ==================================== ================== 4 29 99.2 35 CTTGAATAGTAACTTGGAAGTTTTTAAAT # Left flank : GAATTGTATTCTCCCTTTTCTCTCATCTCTCTAAAAGTAGTTATTCCTATTATTGGTTTCAATTATTTTTCCTCCTCAACATCTCTTTGTTCTATTACATTCTACTATATAATATACTCTCTAGCGAAAGTTTTTACAATACAGAATTGAAAAATAATCTCAATATATATTTTCACATATAGCTCAATTTTGAAATATTTCATATTATTTTAATAAAAACAAACAAATTTTTCTAAACTTTTTAAATTTTTATTAATATAGTTAGGCAATTACAATATAAGAATTTTGTTATATAAAAAATAAATTACTTGTATATTCCTACAACATTATAATTTTTATTTTCCAAGTTAAAAATTGTATTTTTTACAATATCATTCTTTAAGATTATTTATTTCAATATCAGTAATTTATAGTATGTTTGTTGGAATTTTTTCACTTAATATGTTATAATTTGTACATTAGCAAGCAATAAAATATTAAGAAAGTTTAAATTTATGACC # Right flank : GGAATATTTTATATAACTGGCGGAGAAGATAAAAATTGAATATCAACTCATAAGTTTTCTCCCTTTTTCAAATAAAAAAGAGAAGAACTGGATATTAGCTCATGATATTTTGCTATATCTTCAACTTCTCTAAAATTTCAAATTCTTATTTTATTACATTCTTAATGTTAATTATTTATTATTAATTACTTATTGAATAAAATATCAAGCTCCATTAATAAGTCATTATATCTTTTTAATTCATGATTTTTTACTGGAATTAATGGATTATAAATACAATGCTGAAACACATCTGCATCTTTTAGTAATTCATCATATTCTGAATCTATCCTTTCCTTATTACTATGGTTGTGAATGGCTGTACAGATTATATCAATTTCTGTAGAAGTTGCCACCTGTAATTTTCTAATATTTCACGAGCCATAATTGCTCCTTTTTGTCCATGATCTTTTGAATATTCAAATTTATAAGTGTATATATCATGTAACATTCCAGCCATA # Questionable array : NO Score: 2.82 # Score Detail : 1:0, 2:0, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTTGAATAGTAACTTGGAAGTTTTTAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:75.86%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.30,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [73.3-80.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.41 Confidence: MEDIUM] # Array family : NA // Array 1 11931-12216 **** Predicted by CRISPRDetect 2.4 *** >NZ_JADNKU010000025.1 Fusobacterium varium strain 1001254B_151014_B5 NODE_25_length_45071_cov_18.7321, whole genome shotgun sequence Array_Orientation: Unconfirmed Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ===================================== ================== 11931 28 100.0 36 ............................ CACGGCAAGCGCAGGAAGTGCTAGAGCGGTTACAGG 11995 28 100.0 37 ............................ CACATTTTGATAAAGTTTATGAGGAATACAATGAACT 12060 28 100.0 37 ............................ CTTATTCTGAAGTCCTTAATAATGCATTAAATTATAT 12125 28 100.0 36 ............................ TACCCATTTTTATAAATTACAGAATTACAGCAATTT 12189 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ===================================== ================== 5 28 100.0 37 ATTTAAAAACTTCTAAGTTACTATTCAA # Left flank : TTCTATAAAAATAACTGAATATTTTAGTGAGAATGAAGAAATTAAAAAGTTTATCTCTTTTCTAGAAGAAGATATAGAAAAATTTTATTACCAAAATAATAAAAATCTTTCATATCAGAATTTGAAAAGTTTTCTTGATTCATATATCTATTTAGATAATCAAAAATATGACTTTACACTCAAATATGGAATGGTAGAAAATATTTCAAATGTTCGTGAATTTGATGTCTTTCTTCAGGAAGCCAGCAGAAAAATAAGTAAGTCTTCTTTAAGATTTAATAATTTTATCTATACAAATAATTTTTTAACAACATTGGAAGGAAAAAAAGTTATTGTTAAATACAATCCTTTAGCTACTGATATTTTATACTTATTCTTTAAAAATCAATTTTTAGGAACTGCTAATATCATAACAACAGGCTGAAAAATTCTTAGCCTGTTTTTTATATTTAGTTAATAAATTTATATTCTATTATATACAGAAAAGCAAATTGAGGCAC # Right flank : ATACTCATCAAATCAAGCTCGTTATTACTAATTAATATCTTCAACTATGATTTTATCAGGATTTTCTTTCTATTTTTCCAAGCTTACTAGAATTTTTATCAAATAAATTTTTTCTTCTCAATCCCTTTTAAAATAATTATTTGATAAAATTATTAGCTTTTGGACTTGGAAATCATATAAATATATTTTCGTCATCTTTCCAAGGTGTTCCTATTATCTCTTCATCGAAATAATGCTCACTTATCAATTTTACAATGCTTATAAAATCTTCCTTTTTGTCAATAACATCTTTTAATTCTAATCGCATTTTTATTAAATTGCTAGGTGTTATTTCTCCACGAAATACAGATCTTTGGTGGTGACTTAAATACTTCTTACAAATTTTAAAAACTTTATTTACTCTTTTTTCATTTATATCATAAAAAAGAAATACATAGTTATAGTTTTTACCTTTCATTTACATCTTTTCCTTCATATAAAATGGAATAAATTCTTTATTT # Questionable array : NO Score: 3.06 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTTAAAAACTTCTAAGTTACTATTCAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:82.14%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.30,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [81.7-73.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: NA [0,0 Confidence: NA] # Array family : NA //