Array 1 2766-2306 **** Predicted by CRISPRDetect 2.4 *** >NZ_UXFG01000040.1 Flavobacterium psychrophilum isolate 41-SE483_S19_R1.fastq.gz, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =========================================== ========================== ================== 2765 43 100.0 26 ........................................... ATCTGCAAAAGCCTCATCTCCAATAG 2696 43 100.0 26 ........................................... GCGTGCAAAAGACCCATCTCCAATAG 2627 43 100.0 26 ........................................... ACTGAAAAAAGCACCATTTTCAATAT 2558 43 95.3 26 C............................A............. AGCTGAAAAAACACCCCTTCTAATAG 2489 43 93.0 26 ....T...................T....A............. GCCTGCAAAAGACCCTTCTCCGATAG 2420 43 97.7 26 .................................G......... TCTATCAAAAGCAGCATCTCCGATAG 2351 43 79.1 0 AT..A..G.T......G.......T..........TT...... | TTG [2336] ========== ====== ====== ====== =========================================== ========================== ================== 7 43 95.0 26 TAGTCACAGAATTAGGAATTGTAACTGATGTTAAACCAGAACA # Left flank : ACCCATCTCCAATA # Right flank : AAGCGCAAAAGCATTCTCTCCGATAGATCTAACGAAATTCCCAACGTTAACCGACGTTAAACCTTGACAGGAAAAAAACGCAGATTCTCCAATAGCAGTCACAATATAGTTTTCTGAATTATAAGTTACTATTTCTGGTATTACCGCAACTCCACTAAAATCAGGGTTTCTAGCCACCTTAGCAGTAAAGGGAGCTTCTGAAGAAGTAATGGTATATCTTATATGGTTTGCTGTAAAATCTTGTGCTATTCCTAAAAAAGGAATTAAAATGACAAATAATAATTTTTTCATGTTTTTTGTTTTTAATTATTGTATAATAATTGTTTTTGTTGCCTTACCTTGGTTTGTCATTACTTCTACAAAGTAATTTCCTTTTGCAAAGCTTGAAACATTTATTTCTGAATGATTAGTTGTTTTTATTAACTGCCCTAATGTGTTGTAAAAATTCACTTTTTCTAATTGTAAGCCCTCTTGCAAGGCTATGTTTAAAATTTCTGAAA # Questionable array : NO Score: 2.69 # Score Detail : 1:0, 2:0, 3:0, 4:0.89, 5:0, 6:0.25, 7:-0.25, 8:0.8, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : TAGTCACAGAATTAGGAATTGTAACTGATGTTAAACCAGAACA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:67.44%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-0.80,-2.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [4-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [63.3-13.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,0.78 Confidence: MEDIUM] # Array family : NA // Array 1 9426-7788 **** Predicted by CRISPRDetect 2.4 *** >NZ_UXFG01000084.1 Flavobacterium psychrophilum isolate 41-SE483_S19_R1.fastq.gz, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================================== ============================== ================== 9425 46 71.7 29 A.AA.T....A.ACC...CGGGT....................... TTTTGTTTTCGTCAAATTCCCCATTTGTG T [9421] 9349 46 100.0 30 .............................................. ATTAATGCGCTAATTATCGAAGGTAGCACT 9273 46 100.0 30 .............................................. AGGACGATTATAAATTTATGCTAAATATTA 9197 46 100.0 30 .............................................. AGATATATCTAATACTAGAGCGTACGACAG 9121 46 100.0 30 .............................................. AAAAACAATATCGAAAAACTGAAAGAGAAT 9045 46 100.0 30 .............................................. TATATCCGTGTTTGAATACACATTGCCACC 8969 46 100.0 29 .............................................. CGTTTTCGCACGTGAAATCAAAGTACTAT 8894 46 100.0 30 .............................................. TTTTAAAAAATGGTTAAGTAGGAAAACTTA 8818 46 100.0 30 .............................................. TCCAGTAAGCGAGATGTCGTATATCAAAGT 8742 46 100.0 30 .............................................. AGCCAATGCCTTGTGTCCTGTTATGTGTTC 8666 46 100.0 30 .............................................. AAAAGATTTAGCAACATAGATGATTGTTTT 8590 46 100.0 29 .............................................. TTTTACTTTTTATTTAAAGCAACTGTAAT 8515 46 100.0 30 .............................................. TAATAAGTTGCTCGTTTCCGTTTATTCCGT 8439 46 100.0 30 .............................................. AGTAGGTAATGTATTCACAATAGACACATT 8363 46 100.0 29 .............................................. AAAACGAAATACATACAGCGCACGCATTC 8288 46 97.8 30 ............................C................. AGGCACTTCTTTAGACTTAAATAAGTCTTT 8212 46 100.0 29 .............................................. AGTAATAGATGGGGGGTTTGAATGCCGTA 8137 46 100.0 30 .............................................. TCATCATCTGATGAAAATTGCTGTTCAATA 8061 46 100.0 30 .............................................. AAGCAAAATAAAATAAAAGAAATATTTAGC 7985 46 100.0 30 .............................................. AATCAAAATAAGGTTTTAAAAGCGGCTTGG 7909 46 100.0 30 .............................................. AGGGCTTCGATTTTCTCGGGTTTCCATTTA 7833 46 100.0 0 .............................................. | ========== ====== ====== ====== ============================================== ============================== ================== 22 46 98.6 30 GTTGTGAATTGCTTTCAAAATTGTATTTTAGCTTATAATTACCAAC # Left flank : AACGCTTTTTTTTGAGTTTTTCATAAATAAAAAAAGTTTATTGAAACGAATTTCAATAAACTTTTGGAAACATCATATTTTATAGTGACTAGAAAGGTTTTTACCAACTATTTTTGACTATTAAACCACAAATTTAATAGAAAATTTAAATGGAAAAATTAGAAAATACACTAAAAATAAAATGTCATTCCCTACTGATGATGCGGTTCTAAAATCAGTTTATTTAGCTTTAAAAGAAGCAACAAAAAAATGGTCAATGCCAATACAAAATTGGGGTATTGTTTTAAATCAATTTAATCTTATATTTGACAAAAGGCTCAGATTATAAAATCCAAGCCTAACTTTTTAACTTACACACTTTGCGGGATAGTGTCATCA # Right flank : ATACCGCGAGTTAATCGTTTGATATGTTGGTGGTTATATGCTTATTTTGAAATTAAAAAACAGTTCTGTTTGTGTGTTGATATTCTGGTAGGTCTAATATTTCTAAATCCTATTTTTCAAAAAAGTTCTAATTGTTGCGAAGGTTTGTCTGTTTCTACAGGTTTTTTTCCATAAAAAAGCTCCATCATACCAAATTGTTTATCGGTTATTTGCATTACTCCAATTTTGCCGTGTTCGGGCAAACTATTTCTTATTCTTTTGGTATGTACTTCGGCATTTTCTCTGCTGGCACAAAATCGTATATAGATCGAAAACTGAAACATAGAAAAACCATCGTCCAATAATTTCTTGCGAAATTCACTGGCAATTTTACGCTCTTTCCGCGTTTCGGTAGGTAAGTCAAAAAAAACTAATATCCACAAACTTCTATACTGGTTTAAACGGGTGTAATGTTCGTCATACATAAATAGGGTATAAAATTTTTCTTGCGGCTCCCGCAA # Questionable array : NO Score: 6.19 # Score Detail : 1:0, 2:3, 3:0, 4:0.93, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGTGAATTGCTTTCAAAATTGTATTTTAGCTTATAATTACCAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:73.91%AT] # Reference repeat match prediction: R [matched GTTGTGAATTGCTTTCAAAATTGTATTTTAGCTTATAATTACCAAC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-0.90,-3.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [1-14] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [71.7-66.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.41,4.87 Confidence: HIGH] # Array family : II-C [Matched known repeat from this family], //