Array 1 188162-184234 **** Predicted by CRISPRDetect 2.4 *** >NZ_CAAGUD010000009.1 Klebsiella pneumoniae strain 5012STDY7312564, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 188161 29 100.0 30 ............................. CTCACGCTGATACCTCGGAAAAAGACGGGC 188102 29 96.6 32 .G........................... GCGGGCTGGGTTTTGTCGACTCTGCCGATCCG 188041 29 100.0 32 ............................. TAATATTGATAAATTCGATGAAGTAACCGGAA 187980 29 96.6 32 ............................A TCGAAGTACCAGCGCCGCACCGTGTTTTTTGC 187919 29 100.0 32 ............................. GTGGCCGGTGCTGCCAGTACGGTTACCGAAGT 187858 29 100.0 32 ............................. CATCCACGCTTCTGGCCACCAGGCAGATAATC 187797 29 100.0 32 ............................. GTGCTCCTCTTCCAGATACTGGGCCAGGAGCT 187736 29 100.0 32 ............................. TACAGGACGACAGCATCCTGGAACATTTCGAC 187675 29 100.0 32 ............................. CTCTGCGTGTGCGCCTCCGCTACGAGGTGACG 187614 29 100.0 32 ............................. TGAATATTCATTTACTAAATTAGAGACAATTC 187553 29 100.0 32 ............................. CGGATTAAACGTAAGGCCGCGCGCTGGCGTAA 187492 29 100.0 32 ............................. GTGGTTTGTTACCGTGTTGTGTGGCAAAAAGC 187431 29 96.6 32 A............................ GAACGGAGGAATATAAGAACAAAAGCCCGCAG 187370 29 100.0 32 ............................. TAAACCGCTGGCGTGGTCAGTTGCGTGGCGGT 187309 29 100.0 32 ............................. GGCGCCGGCCTGATCACTATCGGGTAACGGTG 187248 29 100.0 32 ............................. GGCCTGAACCAGAGCATGATCTACACCTGGAA 187187 29 100.0 32 ............................. ATTGGGTAGAGCAGGCGAACGGATGTCTTTTT 187126 29 100.0 32 ............................. TTTTCACGGTCGAAGTTGTGCATGCTTTCTGC 187065 29 100.0 32 ............................. TCGACGCCCCGGTGTGGGAAGACTTTGGCACC 187004 29 100.0 32 ............................. CAGCGCATACGGGTTAAACCGGATCACCTCTT 186943 29 100.0 32 ............................. ACATAGCGCCCGATACGCAGCGCCAGCGGGTA 186882 29 100.0 32 ............................. GATCGATCGTTATTGTTGAACCGCACTATGGT 186821 29 100.0 32 ............................. CTTTTAATAATATCATCGGCAATGTCCTTATC 186760 29 100.0 32 ............................. CGGGACCGGATCCGCGTGGGCGACCAGGATTA 186699 29 100.0 32 ............................. CACCGATATTCAGTGCGCCAACGCCATAGCAA 186638 29 100.0 32 ............................. CCGAGGTTTTTCATACCTTCGGCAGTCGTAGA 186577 29 100.0 32 ............................. CGGAAATTTTGATTAGTTGAATCTGTGCCATT 186516 29 100.0 32 ............................. CCGACTTGGGACGAGGATCCGGCGGAATGTCG 186455 29 100.0 32 ............................. TAATGGCAAAACCATGACCTGATCCGGGCGTC 186394 29 100.0 32 ............................. CCTGAATCTTCACTTCGTCGATCATTCTGCGC 186333 29 100.0 32 ............................. GGTCAAAAGGTTCATTCGAGCATCGAGTTGCA 186272 29 100.0 32 ............................. GTAACGCAGACGGCGAACGTCGGATCCATTGG 186211 29 100.0 32 ............................. GACCAGAAAGCCTGGGCATTGTTCCGCTCATT 186150 29 100.0 32 ............................. CCCCCGGCCGCGTGGCCGATTGCCATTACCGC 186089 29 100.0 32 ............................. TATACAGTATTATCATAGCGAATTCCCATCGG 186028 29 100.0 32 ............................. GTTGGTAATTACTGCTGTGTGTTACGGATAAA 185967 29 100.0 32 ............................. GCACCAACGTTTACGGTGCGGTGGTGAAACAA 185906 29 100.0 32 ............................. TGCCGGACGTTGTACCTGTGAGTTAATTCTTC 185845 29 100.0 32 ............................. CGATAACCGGGCGTTTCGACTGAACTCACCTC 185784 29 100.0 32 ............................. TTAATACCAGGGGGCAGGTTCAGCAGGTCCCC 185723 29 100.0 32 ............................. CCGCTTTAACCCGCTCCGGCAGATCCGGGTGA 185662 29 100.0 32 ............................. CGCGCTGCGAATTTGTTGGTCGATTTCGATCT 185601 29 100.0 32 ............................. TGGGTAGAGGTTAACTGGTTATTGGTCATTGA 185540 29 96.6 32 ........T.................... ATCGCGGAGGCCTTCGGTGTGTCTCTTTCCTG 185479 29 100.0 32 ............................. CCGTTGTCAATATCTCCCGGCGTCCGCGCCAG 185418 29 100.0 32 ............................. CTGCAGGTAAATGACTGGATGGGGGAAGAGGT 185357 29 100.0 32 ............................. CACGTCCGGAAACCACGGGTTATCCGTGTAAT 185296 29 100.0 32 ............................. CAGAGGTCCTTATCTTTTCAACGTCAAAGTCG 185235 29 100.0 32 ............................. GCAATCCCAGAGCGCGAATATCTTGGGCTCTC 185174 29 100.0 32 ............................. GACATGGCGCGCGAGTTTATCGACGCCTGCGC 185113 29 100.0 32 ............................. GGGATGAGCGTTTTCCGGTGGATTCTGATGTG 185052 29 100.0 32 ............................. TCCCCTACCACCCACTGAGCAAACTGGTAGCA 184991 29 100.0 32 ............................. CAGATACCAACGGTTACTACGGCAATCAGCAC 184930 29 100.0 32 ............................. AAGGTTGACCTGTTGTCGGCAACCATCGAGCC 184869 29 96.6 32 .........A................... GAGGCGCGCGTTGTCGTCGGTGAGATGCGCGA 184808 29 96.6 32 .....A....................... GCCATTCGTGCTTCTTCGCTTTGCTGCATCCA 184747 29 100.0 32 ............................. GAATATAAAACCAGATTCCATATAGCCCTGTG 184686 29 100.0 32 ............................. CCGGTTACGGGGATGACTGCAATTCGCTCCTG 184625 29 100.0 32 ............................. GGTCAAAAGGTTCATTCGAGCATCGAGTTGCA 184564 29 100.0 32 ............................. GCGGCGTCAGGTGTGTGGCAGAAAATTATTGC 184503 29 100.0 32 ............................. TCGTCTGAGTTCCGGCTTACGCCGTGCCGACA 184442 29 100.0 32 ............................. GTGATCGTCATGGATATCACTGCCGTTCCGTC 184381 29 100.0 32 ............................. CAGACAGACAGCAGGCAGCAAACAGGGAAGAC 184320 29 96.6 29 ............T................ GGGTTCACTTGGGTGAAACTGAACTAACT 184262 29 75.9 0 ...........ATTC...A......G..C | ========== ====== ====== ====== ============================= ================================ ================== 65 29 99.3 32 GTGTTCCCCGCGCCAGCGGGGATAAACCG # Left flank : AGGTGCTGTCTGCTGGCGAAATTGAACCGCCTCAACCACCGCCGGATATGCTGCCGCCGGCGATACCCGAGCCCGAGTCGATGGGAGATAAAGGGCATCGAGGGCATGGCTGATGAGTATGCTTATGGTGGTGACGGAAAATGTTCCACCTCGCCTGCGAGGACGGCTCGCAATCTGGCTGCTTGAGATCCGCGCTGGGGTATATGTTGGTGATACCTCAAAACGGATCCGGGAAATGATCTGGCAGCAGGTGATACAGCTAAGTGACGGTGGAAATGTCGTGATGGCCTGGGCGACAAACAGCGAATCAGGTTTTGAGTTTCAAACCTGGGGAGAAAACCGCCGTATACCGGTAGATTTAGATGGCCTACGACTGGTTTCATTCCTTCCCGTTGAAAATCAATGAGTTGGATGTTCTTTAATAATGTGAGATTGTTGTGATAAAGTTGGTAAATTGTTGTGTGCTTAAAAAGCTATTATAAAACAGTAATATATCTTTA # Right flank : GTCCACTAACGTTATCGATCCTGAGAGTGGGCACGAAAGATTGCGGAGAATAAATATCGCTACCTGCCGCTCTAGCGATATCACTGTTTTTTTACCGTCTCCTGGATCGCGCTAAAATCCGGCTCCGGGCAATCCCGACCAAAATTTTCGGCCCATGGGAACGGGGCGCCGTACTTAACATAGCGCTGATACAGGCGTTTGGTTAATTGAGCATCCCGCCCCCATACCCATCCTGTTGCATTACACAGCACGGCAGCATAGGCCTGTGATTTATATGGCAACAGGTCGGCCGCTTTTTCCGCCAGCGTCACCGCCTGCCAGCGATAGTGTAAGAAATGACTGTCCTGTTTTAGCAGGGATCGCTGAACGCGTTGCCGTTCGCCATCACTTATCCACGATGTCACGGCCGAATTATCTTCCGGTCCCTGGTTGTAATAGGGCCATGAATACCCGCCTCCATACAGCGCAAAATCGGGCGCCATCTCATAGCCTGTCAATTC # Questionable array : NO Score: 6.22 # Score Detail : 1:0, 2:3, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,5] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.00,-13.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [11-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [53.3-78.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.92 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //