Array 1 1592-1354 **** Predicted by CRISPRDetect 2.4 *** >NZ_JADNOP010000021.1 Fusicatenibacter saccharivorans strain D41t1_190614_C8 NODE_21_length_49388_cov_60.6096, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ============================================ ================== 1591 29 100.0 39 ............................. ACTTACCAGAATATACGTATTACGTAAATCCTTTGCTTT 1523 29 100.0 39 ............................. AATCCCTAAGACCTTTATTCACCACCTTCTTCTTTAATC 1455 29 100.0 44 ............................. TTTTTCTGTACTCAAACACAGGAAGTTGTTCACTTGTCCATGGC 1382 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= ============================================ ================== 4 29 100.0 41 GTCGTACTTTACCTAAAAGGAATTGAAAC # Left flank : AGAAACCAGAGCTTAAATCTCGACTTCGCGGATATTTTTAAACCGATTGTTATTGACCGGATCATTTTTACTATGATTAATAAAAAAATGTTAACGCTGCTTACTGATTTTGAAACATCCAATCAAGGTGTGTATTTATCGAGAGAAGGAAAGAATATTTTTCTGCAAATGTATGAGGAAAAGTTAAAGAGCAGGATTACGATAAAAGGGAAAGAAATGTCTTATTACCAATTACTGGAGAGCGAAGTTCAAAATTATAAGAATTTTATTTTGACTGGGGAAACGTATAAACCATACAAATATTATTAACGGGGAAGCTTATGTTCCATAGCAAAAAGTCGGTCAGTCTCGTGGCTGAAATCATGAGTTCCACAAAATGGCTGAAATTCAAGGAAAATCAGGAATCTCAGAAAAACGATCGACCGACTTTTTCGATAAAATGGTTGCAAAAATGAGAAAAATCTGATTTAATAGAATCTGAAAACAGCGGAAATGCTGTT # Right flank : TTTTTTAGCTGATATGCATCCATTTCGTCGTACTTTACCTAAAGGTGCTATATGGGGTCAGACCCCAATGTGGCACAGAAACTCTAATATAAAGATCAACCAGGTCAGAGCTTGGAAGCGGTGATGATATTGCTGCCTTTTTCTTTGCCATAACCATTCTTCTTTATTTTCTCTAAAAATGAGTACAAAAATAACACCGAACAAACTTTCTGATTGTTTGGTGCTCCAGAAAAAAGTAATATATCGTTTGGAGGGTTGTCCATTTTCTGGATGATCGATTGCCGCTCTGGTGCGCCAACACCGGGGCGGCTTTTCTTTTACGTGTGTCCAGCAAAGCTGGACTACACTTGCCGGTGTAAGTCCGGTCACGGTAATCGCCAGTGGGTCATTGGGGTCAGACCCCCTTACGATTTTCTTAAAGAAAAAGGATCAGAAATAAAAGAATCCTGAAGTGCCAGCTTCAGGATTCTCAAGTCCGTTAAGGTGGACTATTCCGTTTG # Questionable array : NO Score: 5.86 # Score Detail : 1:0, 2:0, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGTACTTTACCTAAAAGGAATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:65.52%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.20,-0.60] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [61.7-68.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,4.5 Confidence: HIGH] # Array family : NA // Array 2 4548-3972 **** Predicted by CRISPRDetect 2.4 *** >NZ_JADNOP010000021.1 Fusicatenibacter saccharivorans strain D41t1_190614_C8 NODE_21_length_49388_cov_60.6096, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ============================================= ================== 4547 29 100.0 38 ............................. GCTTTTTCGATTGCTTCTTCTACAATCTGCTGAGCTTT 4480 29 100.0 40 ............................. ATAATGGGTCTTTCTTTCCAAAAATCTTATGTGGAGTTTC 4411 29 100.0 40 ............................. TTAATAATCCGTGTAGCTTTCTTTTTTTCCATTATATTTT 4342 29 100.0 38 ............................. GTTTCGCCTGTTTTCAGATTCAAGTTAAATTTGCACTC 4275 29 100.0 44 ............................. GATTTCTTCTTCCTTGAATCTCAGATACACATATCTCTTGTTTC 4202 29 100.0 45 ............................. CTTTCAGGCTTGCCCTTGAAGCAAGCATCAACTGTATAATGTCAA 4128 29 100.0 36 ............................. CCATCTGTCTGTAAGCAACCTGTGGCTTATTAAAGT 4063 29 100.0 34 ............................. ATGTTTGGAGATACATGTGACTGACGAATGGTCC 4000 29 89.7 0 ...................A.......TT | ========== ====== ====== ====== ============================= ============================================= ================== 9 29 98.9 40 GTTGTACCTTACCTATGAGGAATTGAAAC # Left flank : GGTATATGCCACAGATTTGAAAAGCGAAAAAACCTGGTATTTCAGTCCGGATGAAGAACCATTTTGCGAGATGATCAATGATAATTTCTACCGGAAATACCAGGCCTATTATGGAATAGCTCCTATGTCCGGAATACAGCTGGGAATCTGTGAAAACAGTATGCCGAAAAAGCTGGTAACTCGTTATAAGGGGACTTTTATTACTGCCTGGTATGGAACTTATAAACTAAGCGGAGAACGTAAATACCTGGACTTCTTGTACCAGACAGGTCTTGGGGCGAAAAACGCGCAGGGATTTGGAATGTTTGAAATACTTTAAAGAATTAAATTGGAAAAAGTCGGTCGATCTCATGCCTGAAATCATGAATTCCGCAAAATGGCGGAAATTTAAGGAAAATCAGGAATCTCAGAAAAACGATCGACCGACTTTTGTGATAAAATGGTTGCAAAAAAGAGAAAAATTTGATTTAATAGAATGTGAAAATAGCGGAAATGCTGAT # Right flank : ATAAAACAAAGGTGTGAATTGAATGTACGTAATACTGGTATACGATATCCATCAGAAACGCGTTGGGAAAGCCTTGAAAATATGCCGGAAATATTTGATTCATATACAAAAGTCTGTATTTGAGGGAAATATTACAGAATCAAAATTGAAGGCGTTGAAAGAAGAATTAGGCCATCTTATTGATACACAAATGGATTCTGTCATCATTTATCATTTGGATTCGGTAAAGTATACAAAGAAGGAACAAATCGGTATCGTGCAGTCAACTTCTAACGTTATCTGAGGTGGATATGTTTACAATTGATGAAATGCTTTCGAAGAATAATCAGCGTCTGGCATTTGAACATTTCGCAACGAAAAATGATGGTTGCGGTCCAGACGGAATGCACGTTTCGGAATTGGAAAAGTACTGGAGAATGAACCATGACCAAATAATTTCGGATTTGAAGAATCAGGAATATCAGCCGGGAATCATCCTGATACGTGAGCATATGAATAAG # Questionable array : NO Score: 9.21 # Score Detail : 1:0, 2:3, 3:3, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGTACCTTACCTATGAGGAATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:62.07%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-0.80,-3.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [3-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [66.7-71.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.28 Confidence: HIGH] # Array family : NA // Array 1 7321-6493 **** Predicted by CRISPRDetect 2.4 *** >NZ_JADNOP010000002.1 Fusicatenibacter saccharivorans strain D41t1_190614_C8 NODE_2_length_298267_cov_66.2084, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 7320 36 100.0 30 .................................... GCCAGATACCTCCTATCGAGTGATGATGCG 7254 36 100.0 30 .................................... TGATAGATTGCCATACCTAATACCTCCATG 7188 36 100.0 30 .................................... AGGTTCTAATATTATTCCACTTGCAGGAAA 7122 36 100.0 30 .................................... TGAGGACGATTTCTATTCTGCAGGCATGAA 7056 36 100.0 30 .................................... ACCCTGTCCAGAAAAGCCTTCATCGACGAT 6990 36 100.0 30 .................................... ATCAGGAACAAACGTGAAAGTCGAAAACCA 6924 36 100.0 30 .................................... TACTGTATATGGTGCGAATGATGGTTTTAA 6858 36 100.0 30 .................................... CTGAAAACGTCATATGACGGCGTAAAAGAC 6792 36 100.0 30 .................................... ACGATTTGAGCGCGTAAATGACAGCTTCTA 6726 36 100.0 29 .................................... CGCTCGCTGCTCACTATCCATCACCGCCT 6661 36 100.0 30 .................................... TTTCCACCTCCCCTAAATCTGTAAGTAATG 6595 36 97.2 30 .........................A.......... ATTTTCAGGGCAAATTCTGCTAAATCGTAC 6529 35 80.6 0 ...................T.-...TT.TG.G.... | AC [6495] ========== ====== ====== ====== ==================================== ============================== ================== 13 36 98.3 30 GTTTGAGAATGATGTAAAAATGTATGGTACTCAAAC # Left flank : AAAAACGGTTATTTACAGAGCTGGTCAAAAGTGCGCAAAATGAAGAAATGTTTCTGGAAACGCAGAGAATTATTGCGGAACTGAAGAAATACATCTATCAATTGGAAGCTGTCAGTGGGTACGAATTGGAACAAAATGAGGAAATCGATTTGAGCGCACTCCTAAAATTGATGGGAGTTCAGACAGAAACCGAAAAAGAGATGGGGCTTCTGGAAAAATTAACGCAATATATCAAAGTTATGGCCGAACTTCTCCAAAAAGAACTGGTGATTTTGGTCAATATTCGATCCTATCTGAACGAAACACAAATAAACAAACTCTCCCAAATGGCATGCTACTATGAAATATCCTTGCTTTTCATAGAAAATATACAAAGGGACTTTTCGAATCAGAGAGAATATTATATAATTGACAAAGATGGATGTGATGTCTATTAATATCCATCGGATGTTTGAGTACCTGTTTTGTGCAGATGAAAGCAGTTCATTTTTAAATTTGAG # Right flank : AAGAATAGATAATTCAAAATGAAATATTCAGAAGACAGTATGAAATCGACTTAATTGTCTTTTTCTTGCTGTCTTTTTCCTTGTCTCAAAGCGCCGCACCATGTATAATAAAACCACAAGAATTTCATTTCATAGTTTTTACAGGAGGAACCTGAATCATGATCCTTGCAATAGACATCGGCAACACGAACATCGTCCTTGGGTGTGTGGAAGGGAAAAAAACATACTTTATCGAAAGACTCTCCACGGACAAGGCAAAAACAGAGCTGGAATACGCAGTCAGCCTGAAAAATGTACTGGAACTGTATGAGATTCCGGTGGAGCAGATCGAAGGAGGTATCATCTCTTCCGTTGTTCCGCAGGTGACAGAGCTCTGCCGGAGTGCGGCAGAAAAAGTGATTAAAAAGCCGGTCAAAGTTGTCGGCCCCGGTGTGAAGACCGGACTTAATATCAAACTGGACGACCCCGCAACGGCAGGAAGCGATCTTGTTGTTGTAGCA # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTGAGAATGATGTAAAAATGTATGGTACTCAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:69.44%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [71.7-63.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.41 Confidence: MEDIUM] # Array family : NA // Array 2 256266-254717 **** Predicted by CRISPRDetect 2.4 *** >NZ_JADNOP010000002.1 Fusicatenibacter saccharivorans strain D41t1_190614_C8 NODE_2_length_298267_cov_66.2084, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ==================================================================================================================================================================== ================== 256265 32 100.0 34 ................................ CCGATGGCCGTTGTGATGGATTTCGGCAGCAGTG 256199 32 100.0 33 ................................ GAAACATTAACACAGTTTTGAAGGGCTTCGGCA 256134 32 100.0 34 ................................ AAATAATTCGTTAGATCGTCAACGCCCAGGCCCA 256068 32 100.0 34 ................................ TTAATGTTGTCACCATCGCGGAACTGCCACATGT 256002 32 100.0 36 ................................ CAGTACAGAGACAGCATCGAGGTAATTCCGGATCCT 255934 32 100.0 33 ................................ TGGTGTTCTCTTCCGGCACTGTAATCACGGTGC 255869 32 100.0 34 ................................ TCCATTTGTGACTCTGGTTCCTTTCGGAATTTCC 255803 32 100.0 33 ................................ GCCGTCGGAATGGCCCATCAGGACGGTTCCGTC 255738 32 100.0 35 ................................ TCAATCAATGCAAACAGAATCACAAAAGAATCCCC 255671 32 100.0 34 ................................ ATACGTGTTCGAACTTTCTTCGCCCTGTGTTCGG 255605 32 100.0 34 ................................ CATGCGTGTTAAAATCGCCTTGACGATCTTCCGC 255539 32 100.0 34 ................................ GTGTGTGATCTTACGCCAGGGATGTGCTTCTATC 255473 32 100.0 33 ................................ ATGACTCTAAAATAAAACGCAAAGAAGAACTAG 255408 32 100.0 36 ................................ TTTATATTTATGGATTTGATGTGGATCGGGCTATGC 255340 32 100.0 36 ................................ ACCGTTATACTGTTTATCGCTGCAACACCCATACAC 255272 32 100.0 34 ................................ ATGATACGTCAGACAACACATCCTCCTCGGAGGC 255206 32 100.0 34 ................................ TTCTATTGGTAGCGAAAACGCTTTTCGTAGAATG 255140 32 100.0 33 ................................ TATCGGTATCGTGTACAGGCCGAAGTTTGGCGG 255075 32 96.9 33 .............T.................. CGGAAACAGATGGTATATCAATGTTATCGGACA 255010 32 87.5 34 ............T...A....A.A........ GGAAGCAGACGGGCGCCCTGATCTAGGTGGCGGA 254944 32 90.6 164 .........TC........T............ GGTGGATCATTGACGAAATTCGCGTTATGAACCTTTGCTCCCTTTAGGGGAACAAAGGTTGAAATACGCCATACGGTAGCACAATATCAGATACGATCGTTGCTATCTTAGCAGAAGAAAGAATGGAAATTTGACGCGAGTCATCGGAAAAGAAAAAGGAAATG 254748 32 78.1 0 ...A...A.....T......A..AG..A.... | ========== ====== ====== ====== ================================ ==================================================================================================================================================================== ================== 22 32 97.9 40 GTCGCTCCCCTCGCGGGAGCGTGGATTGAAAT # Left flank : AGCTATCCTGTATTTTTGTGGAAGTGAGGTGGGAGGATGCTGGTATTGATCACATATGATGTCAATACGGAAACTGATGCGGGGAAAAAACGTTTGCGCAGAGTCGCCAAACAATGTACCAACTACGGAAGACGGGTGCAAAATTCTGTATTCGAATGTATATTGGATAATGCACAGTGTATTGTATTAAAATCTATTTTAGCAGACATTATCGATGAAGAAAAAGACAGTCTTCGGTTTTATTATCTGGGAAACAATTATAAAACTAAAGTTGAACATATCGGTGTAGAACGTGGTACAGCTGTAGATCAGGTGTTGATTTTTTAGGTGCGAATCGGTAGTACACAGAAAAAGCCCGGGAGATTCGCACCTGAAAAAGTGCACAAAAGGTGCTGGAATTGAGAAGATGGGGAAGAAAAGAATGGAAAGGGAAGGAGGAGAAAGATGAAGCGTTGTGAGAAATGGTTAAAAACATAGGGTGAATTTTAGATAAAATTGCA # Right flank : AAGGAGGTGCGCGAGGATACTGTCCTACGATTGCAAAGCGTTCTCTCAGGAGTGAAATGTGTTTGACATGAAAGTTAAATAATGTTAATCTATAACTAGCGTAAGCGACAACTAACCGCTCATGTATTCGCAAGAACCATGAGCGGCTATTTTTCTATTTTAATATTCGGTGAGAAAGGAGGAAAATTATGAAGAGTCCATTTAAAATATTTTGGATCGTACTCGGCTTTCTGTGTCTGGGATTTGGTACCATCGGTATTGTGCTTCCGATTCTGCCGACAGTTCCATTCTATATGGCAACCCTGTTCTGCTTTGCGAAAAGTTCGGAACGGCTGCACAGCTGGTTTATTGGGACCCAGTTATATAAGAAGCATCTCGCCAGCTTCGTACAGCATCGGGCGATGACGGTAGGAACGAAATGTAAAATTAACGGGATGGTAACGGTTGTGATGGCGATTGGCTTTTTTGCTATGAAGAATGTGCCGATCGGAAGAATCTGT # Questionable array : NO Score: 8.58 # Score Detail : 1:0, 2:3, 3:3, 4:0.90, 5:0, 6:0.25, 7:-0.57, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCTCCCCTCGCGGGAGCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: F [7,5] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCGCTCCCTTCACGGGAGCGTGGATTGAAAT with 94% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-5.90,-7.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [15-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [50.0-70.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,10.05 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 3 293663-293509 **** Predicted by CRISPRDetect 2.4 *** >NZ_JADNOP010000002.1 Fusicatenibacter saccharivorans strain D41t1_190614_C8 NODE_2_length_298267_cov_66.2084, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =========================== ===================================== ================== 293662 27 100.0 37 ........................... AATAAAATGTAGGAGGATATGGAGTGAAAAAGAAAGT 293598 27 100.0 36 ........................... AATGGCCGCCATGCCAACTCCTACTCCAACAGCGAC 293535 27 100.0 0 ........................... | ========== ====== ====== ====== =========================== ===================================== ================== 3 27 100.0 37 GTCGCCTTCCGTGAAGGCGTGAGTTGA # Left flank : ACTGCCGTACTAAACTAAAAAAATAATACTAAGCCATCTGATATAGAATTTGGCAGACAGCCAGAAACAGTATCAGATGGCTTTTATAAAATGTCAATATACGGATGATTACCTACTTACAATTATCAGATAAAGTTCGGATATTATTAGAATTTTATAAATTTAATTACTGGTATCTTACGATGCCAGTAAAAAATAACAAAAAACTTTAGTAAGTTAATTTTAAAAAGCAAAGAGATTAAATTAAAACATATTTTCAGTTGATAGAAAATTAGTGGAGAGATATAATGAAGCAAATTAAATATTATGACAGAGTGTACATGTTTCGAGTGCGAAAGGTAAATAAACAGAAAAATACAGGGAGATTCGCACCGGAAAAATGACAGGATGAAGAGAAAAGCGAAGAGAAGCTAGGTGAAAAAGAAAAGCTAGAATGAGAAATTTGGAAAGAATTAATAAAAATAAGAAGTGTTTAGCAGCAAAAATTATTTGAATTTGCA # Right flank : GAATACTAGCATTTAGACCCTATAAATGTGCTGTTATAGAACGCCTATAAAGATGTTCCTCCTGCTCATTTGAATATTCTTGGAATATAAGTCTTCAATAGCATAAATACGGACCAAGGAAGCTGTATGAGAAGAAACAGAAGAGTAGAAAGTAAATGCTAAAAGAAAAGATATTATAATAGGAAGAAACACGAGTAAAAAATATTATAAAAAGAAAAAACAAAAAGTCATGAATTGATTGTTATGCTGGAACATAGGTGTTAAAATCAAATTATATTGTAAGTACGGGGTATATATACAGTAATAAATTTGAGAAGTTTGTGAGCGTTATTTGCGTATACAAAAAGTTTGCATTTCCAAGAAAGAATTGTATAGGTTTGGAGGGATGTCAATGAATACAAGAGCGTATATTCCAATGGATTTTTTGAATGTTCCAGGAACACAGCTTGAGAAACTGCCATGGGAGCATGAACAGATATTGCGGCGGTATCTCAGCATGT # Questionable array : NO Score: 2.67 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.02, 8:0.4, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCCTTCCGTGAAGGCGTGAGTTGA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [7,4] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-0.70,-2.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [65.0-78.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,0.64 Confidence: LOW] # Array family : NA //