Array 1 56630-57799 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_JADPGJ010000002.1 Faecalibacillus intestinalis strain BSD2780120874b_170522_H5 NODE_2_length_243000_cov_37.6395, whole genome shotgun sequence		Array_Orientation: Forward

  Position	Repeat	   %id	Spacer	Repeat_Sequence                     	Spacer_Sequence                       	Insertion/Deletion
==========	======	======	======	====================================	======================================	==================
     56630	    36	 100.0	    31	....................................	TATTTAATTCATAATATATATATAAATAACT       	
     56697	    36	 100.0	    30	....................................	TATTGAAAGTTTAATTATATTAATAACTGT        	
     56763	    36	 100.0	    30	....................................	GTTTCAACCGAATCATTAGGCTATAAGCCA        	
     56829	    36	 100.0	    30	....................................	ATATTTTTCATTAATCCACCTCTGTATTAA        	
     56895	    36	 100.0	    30	....................................	TTTTGGACTGAGTTTTGTAGAGCGCCATCT        	
     56961	    36	 100.0	    30	....................................	TATATGTAGGATATAGACACACAAGTATAT        	
     57027	    36	 100.0	    30	....................................	ACAAGAAACAAATGGTATGTTTCAATTAGT        	
     57093	    36	 100.0	    30	....................................	GAAGTGGTAGCATTTGATCCTACTGACCTT        	
     57159	    36	 100.0	    30	....................................	ATTCCTCTTTTTAGATATTTGATAACTTCA        	
     57225	    36	 100.0	    30	....................................	CTATTGCTAAATCAAATTTATCTATTCCTT        	
     57291	    36	 100.0	    30	....................................	GACCAAAGACGGAAATAAGACCATTGCCGA        	
     57357	    36	 100.0	    30	....................................	CTATTGCTAAATCAAACTTATCAATTCCAT        	
     57423	    36	 100.0	    30	....................................	GTTGTGACAGCAATTCTTCCGCTCGGAGCT        	T [57446]
     57490	    36	 100.0	    30	....................................	ATACGAAACGTATATGTTAGTACTTGAAAC        	
     57556	    36	  88.9	    38	...............................GCT.G	AATAAGACATACGAAACGTATATGTTAGTACTTGAAAC	
     57630	    36	 100.0	    30	....................................	GGAGTAGTGCCCAAGAAGAATCGTTATGTC        	
     57696	    36	 100.0	    30	....................................	CAATAAGCTATGCCGTGATTATTCATTTTT        	
     57762	    36	  80.6	     0	................G....C..A....T...TTT	|                                     	C,T [57778,57792]
==========	======	======	======	====================================	======================================	==================
        18	    36	  98.3	    31	GTTTTGTTACCATATGATTTTTTGCTAGAATAAGAC	                                      	       

# Left flank :   TGAATTAATATATCCAAAATTTATAACATATACACCTAAACAATTCTTAAAAATATTGTTACCAATATTTTTAAAAGAAGAAGATCAAGCAAATGAATATGATCTATCATATGATGAAATTATTCTATTTCAACTTAAAATGATAGATTATATATCTAAACATCAAACAACTAAAATAATTTGTCTTATAGAATTACCATATCTATCAAAAGAAATAAATGACTATCTCATAAATATGAAAAATTGCTTTATTGTTGTTATGTTTTATAAAACAAACAGTGTTTTAAATATAAAAGATACTTATATATTTGATGATTTAATAGTAGATTTAAATAATGATGAACAAATATATAATATCTATTTAAATAAAGGTGTATGCACACTACAGGAGGCAAAAGAAATGATAATAAATAATATAAAAGCTAAACTTGATATATCTATAACTCTATAAAATATTCAATATTTTATTATTTTTAAATATATGGTAACATGTATTTGAG
# Right flank :  TAAATGCATAAAAAGAAATTTCTCAAGGATGCCATTTTGAAATCTCTTTTTGTTTATAAAAATATTTACATAAAATAAAAAACAACCCGAAGGTTGTTGTTTATTAAATGGCGTCCACGAAGGGATTCGAACCCCTGACCGCACGCTTAGAAGGCGTGTGCTCTATCCAGCTGAGCTACGTAGACATTGCTTACTTTCAACTGCTCATATATATTAGCATGAATATGAAATGATTGCAATAAAAAATTACAATTTTTTTTAAATTTATATTTTGAAGAGATATATATAAAATAAAAAACAACCCGAAGGTTGTTGTTTATTAAATGGCGTCCACGAAGGGATTCGAACCCCTGACCGCACGCTTAGAAGGCGTGTGCTCTATCCAGCTGAGCTACGTAGACATTGCTTACTTTCAACTGCTCAACTAGAATAGCATATATTTTTTTAAAAAGCAATACTTTTTTAAAAATCATCTAAATTTTTGAATTCAACCTTTAAAT

# Questionable array : NO	 Score: 6.17
# 	Score Detail : 1:0, 2:3, 3:0, 4:0.91, 5:0, 6:0.25, 7:0.01, 8:1, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GTTTTGTTACCATATGATTTTTTGCTAGAATAAGAC
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     NA [Repeat is AT rich:72.22%AT]
# 	Reference repeat match prediction:         F [matched GTTTTGTTACCATATGATTTTTTGCTAGAATAAGAC with 100% identity] Score: 4.5/4.5
# 	Secondary Structural analysis prediction:  NA [0.00,0.00] Score: 0/0.37
# 	Array degeneracy analysis prediction:      F [0-24] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: NA [85.0-76.7]%AT Score: 0/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         F [4.91,0   Confidence: HIGH] 

# Array family : II-A [Matched known repeat from this family],   
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