Array 1 29299-23726 **** Predicted by CRISPRDetect 2.4 *** >NZ_SOAA01000019.1 Halanaerobium congolense strain UTICA-S4D12 Ga0139032_119, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ===================================== ================== 29298 37 100.0 37 ..................................... TCTGATGAAAAAGCTAAGGCAGCAAGCAAAAAATTAA 29224 37 100.0 36 ..................................... TCCATGATGGCCCGGGCAATTGGAGGTGTAAAACAT 29151 37 100.0 35 ..................................... AATGCCCCGAACTCTCAGCCCTGATGTAATTGCAG 29079 37 100.0 36 ..................................... CTTTCACACTTGCTGCATGTCTTGTCGCCTCTAATA 29006 37 100.0 36 ..................................... CTATTCCCATAGAATATATTACTGGTTTTTCACCGG 28933 37 100.0 34 ..................................... GATATTTTCTCCCAAACATCCTGAAGTTCTGGGT 28862 37 100.0 36 ..................................... TAAAGTTAAAATAGATGGCAGCAAACTTAGAATCTT 28789 37 100.0 35 ..................................... TATTCCCGGTAATTAACAAAATCAAAAATCACTCT 28717 37 100.0 35 ..................................... TGGCCGGAATCTTGTAGCAGGAAACATAATTAACC 28645 37 100.0 37 ..................................... TTGATACAACTGTTGCCAAACACTGGTTTGCTGCAAG 28571 37 100.0 34 ..................................... ATTGTTATCACCTTCTATGTGGTTATTAAGCCTA 28500 37 100.0 37 ..................................... AGTCTTTCTGCAAAAGTTACCAATTAGACTACCTCCT 28426 37 100.0 35 ..................................... TCGAGAAAGTCTAAATAAACATTGGCAAACATTTG 28354 37 100.0 35 ..................................... TTTCTTTGATCAAGTCTAATGTTTCCTGCGGATAA 28282 37 100.0 37 ..................................... AAAAAGTGTTGACAAGTTGCCAAATGTACTCTATAAT 28208 37 100.0 35 ..................................... TTTATGTTGCTGGCACTGGATAACAACCCAGTAGG 28136 37 100.0 36 ..................................... GGGAATAGTCAGCTTTTTCTCCAGTATTCAATTCGT 28063 37 100.0 36 ..................................... TTAACTCAGTTTAAATGCTGGGTTTTTCTTTTTCAT 27990 37 100.0 35 ..................................... TCTGATACTATTCTCGGCATTCCTCCTTCAATCCT 27918 37 100.0 36 ..................................... TTCGTGGCTGGGTTAATAAAAGAATAGAAATTATAA 27845 37 100.0 36 ..................................... TTATTTACACCTCCTGGATATCAAAATCAAAAGCGA 27772 37 100.0 36 ..................................... ATATTATATCTATATAATTAATTGTATTTTTAATGT 27699 37 100.0 36 ..................................... CTCCCCCCTCATAATATTCGCACTCATCTAGATTAT 27626 37 100.0 36 ..................................... TTAACTCCCTCACCAACCAACATATATTTAATATTT 27553 37 100.0 35 ..................................... TATCCCCCTTTAATTTTCAACTGGATTAATAACTT 27481 37 100.0 36 ..................................... TCAATAACTTCTTCATCAACGCCACAATCTTTCAAC 27408 37 100.0 37 ..................................... TCATTATCAATAATAAATGGCTCACCCTGCTTATAAT 27334 37 100.0 36 ..................................... AGCAATATATAATCAAACTCCATAACTTCAGCATTT 27261 37 100.0 36 ..................................... AGATAATAATATTTTTTGTTATCACTCAAATTATTA 27188 37 100.0 37 ..................................... TCAAAATTTCCTCTAACATTTGCTATATCTATTTCAG 27114 37 100.0 37 ..................................... GCGATTAAGTTATAATTATCAGTTATAAATTTATCAA 27040 37 100.0 37 ..................................... TAGTGTTGCTTAGCACTTGCTTGTTATTGATTAGCTT 26966 37 100.0 35 ..................................... GCAAAATATAAAAGTTTTGAAGCAATTAATTATAA 26894 37 100.0 36 ..................................... TTTTCAGACTAACAAAAATCCATTTGAAATAGCTAA 26821 37 100.0 36 ..................................... TTAGATAATTTAGCCACCATCTATCACATCAGCGTT 26748 37 100.0 36 ..................................... GGTATCATTTAAAAACATCAATTAATATGAAATTGA 26675 37 100.0 37 ..................................... TCCACATATCGTGAAATGCTTCAGTAACGCTTTTTGT 26601 37 100.0 35 ..................................... TCAGCGGTGATATAATCAAAAATCAGCTGGCAAGT 26529 37 100.0 36 ..................................... AGATACATTGCTGCTTTGTAAGGCTTGCTGTCTTTA 26456 37 100.0 36 ..................................... TTCTGTGATAAATACCATCACCTGGAAAATAAACCG 26383 37 100.0 36 ..................................... GAGTCTGCAACTGGACACACAACTGAAACTATACAA 26310 37 100.0 36 ..................................... TCAATTTGTTCTGCTGGATGTGTTTTTGGATTATTA 26237 37 100.0 36 ..................................... GAGTCTGCAACTGGACACACAACTGAAACTATACAA 26164 37 100.0 36 ..................................... TCAATTTGTTCTGCTGGATGTGTTTTTGGATTATTA 26091 37 100.0 35 ..................................... GAAGGGGGACAATAATGGAAAAATACAAAAATCTT 26019 37 100.0 34 ..................................... TCCCCTTTCGATTCGTGTTCTAATTCAATTCTAA 25948 37 100.0 36 ..................................... TAAACAACTTTAAACAATCTAGTTAATGCAATCAAT 25875 37 100.0 36 ..................................... ATTTTAAGCTCGTCAGCTTTCAGATAATGGTACTAA 25802 37 100.0 36 ..................................... AGCTCCCCATGTGGTGTTAGTGTATTGCTGTAAGTA 25729 37 100.0 37 ..................................... TCCTGTCAAACAAACAATTGTTCGATAGATTTTTAGT 25655 37 100.0 36 ..................................... ATTAGGAGAGGATATGAAAAATTTTCGTCTTGTCCA 25582 37 100.0 36 ..................................... TTACAGGTATTATTAATAGCATTACAGCTTATAGGT 25509 37 100.0 36 ..................................... TGCTTGGCTCTATGGAGCTGGAGATGAAAAGATAGG 25436 37 100.0 34 ..................................... AGGAAGAAGGAGAATATAAAGTTGACCTTATCCT 25365 37 100.0 36 ..................................... AGTAGTACTAGTATTCCTTAGCTATCTCTTGTATTG 25292 37 100.0 36 ..................................... TGCTCAGAAGATCCAGAGAAAAAGAAATCATTCTCT 25219 37 100.0 34 ..................................... AAATGTTCACGAATGGGTAGACGGTTTAAAGCTG 25148 37 100.0 35 ..................................... TAATTATAGAAAGTTGAGCGGTCTATGTTCAAAAA 25076 37 100.0 37 ..................................... AATGAAATGAATAGCTCCAGTGGTGCAACTGAAACAG 25002 37 100.0 36 ..................................... CAAGAAGCTATGGCATTGATGGAAACAGCTGCAAAA 24929 37 100.0 35 ..................................... AAGGTATGCTTGGAATCAAATCGCCTTCAAAAGTG 24857 37 100.0 36 ..................................... GTGGAAATGCAACAACTACGCAAACTGTAAATATAG 24784 37 100.0 35 ..................................... AGGGTTTCGGCCACGCAGAAGATGGCACGGGAATA 24712 37 100.0 36 ..................................... TCAAGTATTACTGTTATATTAGCTGTGCTGTATCCT 24639 37 100.0 36 ..................................... TCATCCTCTACTCTAACAGGTTGTCCTTTCTGAAAA 24566 37 100.0 35 ..................................... AAGGCTTCGGCCACGCAGAAGATGGCACGGGAATA 24494 37 100.0 36 ..................................... TAAGATAGATGAAAAAGAAGAGGCAGAGGACCCTGA 24421 37 100.0 36 ..................................... TTATTTTTATTAGCTTCTAGTTCCCTGTTCATCTTC 24348 37 100.0 36 ..................................... ATAAATTAAAAAAAAGCAACCAATAAAGCTAAAGGA 24275 37 100.0 36 ..................................... ATTTTCCGTTAGAATAAAATAAAAATCCTCTAAAAG 24202 37 100.0 36 ..................................... TGCTGCAAGAGTCAGAGAAAAACCTTCTCAGGTTAT 24129 37 100.0 36 ..................................... AATATATGTCGCCTTCTACAAAAGTTAAGACTGTTT 24056 37 100.0 37 ..................................... CCTTCATTATAGCTTAATCTGCTGCCTCATGGTCAAC 23982 37 100.0 36 ..................................... ACAGTTCCCACAGGTGGAGGAAAGACTAGAACTGGT 23909 37 100.0 37 ..................................... ATATAGCTATACATATTATTATGATATTCTTGCTCTT 23835 37 100.0 36 ..................................... ACAGTTCCCACAGGTGGAGGAAAGATTAGAACTGGT 23762 37 100.0 0 ..................................... | ========== ====== ====== ====== ===================================== ===================================== ================== 77 37 100.0 36 GTTCCAGTGACTGATCCACTAAAATAAGGATTGAAAC # Left flank : TTCTTAAAACGGTTAATCATTGGTAATATACTTAGCTTTGCAAAGGGAATAGACTGGTGGATTGAAGAAGAAATAGTTATAGAAGCAAAATTAGAGGAGATTTCAGTTAAATTCAAAAATGAAGCGATGATTGGTTTTAAAGGTTACTTTTACAGCAATATTTATTTACCTGAATTTATAGGATTAGGAAAATCGACTAGTAGAGGTTTTGGGACAATAAGTAGAGAAGAAATTCTTGATTGAGCTTGTTTTAAGACTGAAAATTTTATAAAATATAACTAAGAAAGAGAAAAAATTATAAATTCTGAGGCAAAATTATTTTGCTTGAGAATATTGAACCTTGACAATCCAATAGATGCCAGTTTGGTCAGGATAGTCAAAGTCGCGGAATTTGGTGTTAATTTAACTATTTTTTTAGATTTAGTTGGGAAAATGGTTAGAAAAAAATCTAGAAGAATTGCTATAATGACTGTTATAAAAGTTAATTTGAATTATATCGG # Right flank : TATCTACGCAAGCGCAGGAGAATCCAAAAGAATCTGTTCCAGTTGTATATGATAATATACAGAGTTTAGAATTTGGTTGACATTGAATTCTAAAAGAACTGTAAAATTTTAAGAAAATAAAGGAAGACTACAGGATATCTATACCCAATTTTAATAGTGATTTTTACCATAATAACAAAAAATAGATTTTTTTAAAAATTAAACTCAAAAATCTATTTTAAAATCTTAAATCAGATAATTTTAGAGTTAAATCAAAGGAAAATTATATTTTGTGGCTGCTATGAATAATTTAGGATTATGACTTTTAATTAATGAAAGGAGCAGAAAAATGAGTATTGGAATTATAACTGATAGTACCTGTGATCTAAATCAAAAATTAATAGAAAAATATAATATTGAGGTTATCCCTCTATCAGTACATTTTGGAGAAAAAGAATTTAAGGATGGTGTTGATATCAATCCAAAAAGTTTTTTTAAAAAGCTGAATAAAAATAAAGAAC # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:0, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCCAGTGACTGATCCACTAAAATAAGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:62.16%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-2.60,-3.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [63.3-78.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.14 Confidence: HIGH] # Array family : NA //