Array 1 1539068-1538505 **** Predicted by CRISPRDetect 2.4 *** >NZ_MJII01000001.1 Intestinimonas butyriciproducens strain 27-5-10 unitig_0, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ==================================== ================== 1539067 32 100.0 34 ................................ TGGGTGTGGACTATGAGTTGCAGAGCGTTTCCCC 1539001 32 100.0 34 ................................ AGCTCCACCTTCCGCCGGTACAGCTGCGCCAGGT 1538935 32 100.0 33 ................................ CAGGTCGGAGTTGTTGAGGCCGGAGATGGCGGC 1538870 32 100.0 34 ................................ ACGTCCAGTGCCGCCAGCTCCTCCCTGAGCTTAG 1538804 32 100.0 36 ................................ GGATGCCCATACCCTCGTCCCTGGCCTTGGAAAAGA 1538736 32 100.0 34 ................................ ATTTGGGCCGAGGCGCTGGGCTGATAGGACTGCG C [1538732] 1538669 32 100.0 34 ................................ GTGGAGATCCTGGAGCTATGCCTGGAGGCTGCTG 1538603 32 100.0 35 ................................ CGTCTGGAGGGAGACCGGGCCCTCTACGAGGCGGC 1538536 31 81.2 0 ...................T-..T....C.CA | C [1538525] ========== ====== ====== ====== ================================ ==================================== ================== 9 32 97.9 34 GTCGCCCCCCACGCGGGGGCGTGGGTTGAAAT # Left flank : CGCGGGGATCTGGATGGGTATCCGCCGTTCCTGTGGAAGTGAGGATACTATGCTGGTGCTGATCACATATGACGTGAATACGGAGGATGCCGCCGGAAGAAGGCGGTTGCGGTGGGTAGCGAGACAATGTGTGAATTATGGGCAGCGGGTACAGAACTCCGTGTTTGAGTGCGTCCTGGACGCGGCCCAATACCGCCAGGTACAGGCAAAGCTGATACAGATTGCCGATCTGGAGCGGGACAGCCTGCGGTTTTATATGCTGGGCAACAACTACAAAAGCAAGGTGGAGCACTTTGAAATAAAACCGTCCTATGAGGCGGAGGGGGTACTTATGGTGTAGTGCGAGGACGGAGCGTGCAGCCAATTGCAGAGACGTTCGCACCTGCAAAAGTGCAGTGGAGAAAAGAAATTGCAAATGTATGGGCCGCACGAGGGAGAGAAAGTTGAAATTTGTGTGCAAGATCGCCAAAATAGATAGGGGAAGTTTGTGCGATTTTACT # Right flank : CCAAAATGTGGTACGCTGGACAAGAAAAAATACCAGCAGTGAGGAGGAGCCCCAACGATGAGTTTTACCCTTCCTGTCTATCAGCCCCCTGATTTTGCCGCACTTGGTCTGGGGGACGCCCCCGATGTAAAGCTGGTCCCTGCGGAGCGGGACGGCGTGGTACCGGAGCAGTATCACGCCACCACCATGTTCCCCGAGTATTTCCGCCTGAACGGGCGGTGGGTGTTGGCCGAGGAGAGCCGCATGGACTGCGTGGCGGTATGCAGGGATGGGGCCGTCTCCATTGTGGAGTTCCGCAATGTGAAGAAGGGAGATCCGGTTGCCGTGGGCCGCACGGAGGATGGCGGTGAGGGAATTTATGTCCACACCGGCGGCTTTGGAGAGGAGGGCGGCGGTGGGGAGACCTTCTCCTTCCGGCAGGGACGCTCCAGGGAGACCGCTTACTCCATGGACTATGACTCCATTTACGAGCTTTTAAAGTATGAGCGCGACCATGGGAA # Questionable array : NO Score: 6.16 # Score Detail : 1:0, 2:3, 3:0, 4:0.90, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCCCCCCACGCGGGGGCGTGGGTTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,4] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCGCGCCCCACGCGGGCGCGTGGGTTGAAAC with 94% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-13.80,-14.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [7-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [50.0-63.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.55 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 2 2070769-2070000 **** Predicted by CRISPRDetect 2.4 *** >NZ_MJII01000001.1 Intestinimonas butyriciproducens strain 27-5-10 unitig_0, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================= =================================== ================== 2070768 33 100.0 33 ................................. GCCAACACGGCCACTACATCCAACAAGATTACT 2070702 33 100.0 33 ................................. TCGGAGGACGGCGGGAAAACGCCCTTGACCGAG 2070636 33 100.0 33 ................................. TCCAGACTGACTTGCTGCTCCTGGAGTAAAACC 2070570 33 100.0 34 ................................. GCCGGAGTTGTATGGCTGTTATGACACTTATGCC 2070503 33 100.0 35 ................................. GCCTCCATGTGTCTATTGTTCCACTAGATTTCAAG 2070435 33 100.0 33 ................................. AAAAGGTATATGATCTAGCCCGTAGCAATGTTT 2070369 33 100.0 35 ................................. TTTTAAAATCATGGGTGCGGGAGGAGGATTTGAAC 2070301 33 100.0 35 ................................. GTCCAGAGGAGACGGCGGTTCAAATCCTCCTCCCG 2070233 33 100.0 33 ................................. TGCTTATATATTGTGGACATTTGTCTTTTTCGT 2070167 33 100.0 35 ................................. TTTACTTGTACTTTGGATGGGGATAAGCATGATCG 2070099 33 100.0 34 ................................. GTTTATAAGCAGGCCGGGGGGGCCGTGGCCACGG 2070032 33 81.8 0 ........................A..CTCC.C | ========== ====== ====== ====== ================================= =================================== ================== 12 33 98.5 34 GTCGCCCCCCACACGGGGGGCGTGGATTGAAAT # Left flank : ACTTGGACGCTTACCCACCTTTTTTGTGGAAGTGATAGTATGCTGGTTTTAATCACCTATGATGTGAACACCGAGGACGCCGCTGGCCGCAAACGTCTGCGGCAAATCGCGAAGCAGTGCGTCAACTACGGACAGCGGGTGCAGAACTCTGTCTTTGAATGTCTGCTGGATGCGGCCCAGTACCGCATGTTACAGGCAAAGCTGTGTAAGATCATGGACCCGGAAAAGGACAGTCTTCGTTTTTATTACTTGGGAAACCGCTATGAAAACAAGATCGAGCATTTTGGAGTAAAGGCATCCTACAACCCAGAAGATGTATTGATGCTTTAGGTGCGAAACGTAAACGCGCAGAAAATCACCGAGGTCTCGCACCAGATTTTGCAGTATTATCTGTAAGGAGGCAACCTTATTTTTCAAAATCGGATAAGAGTTAGGAGAGGATATTTGTAAGAATTGTCTATTTTTCGCGCGAACAGCTTGAATTTTTAGCTGTTTTTGCT # Right flank : TTTATACAGTCGCTCACATATGGATAAAACCGCTAAAAAATCCAATGAATCTTTCGTAACAGCATCCTATCCTACTTCTAACAAATTTCTAACAGAACGATAAAAAATGAATATCCAACAGGCCCAATGGTTTTTGAGATTTTATTCCGCATGAAACCCGGAACTCCTTGTGCCACAGCGGTTTTATTGGGTATTACCAGAGACAGCCAAACACCCGTAGGAACATACCATGCCCTCTTCGAGTTCTGCTGTCTCCACCAGAAAAATCCCTGGCGCCGCAAGGCTTTGGGGATTTTTCGTTTTTGGTTAATTTTTAAATGTGACATTTCTTTGTATCAAATGTGTTTCTTTTATGAATTTTAGCACTCCTATATTGACAGTGCTAAAACAGAGGACTATAGTAGAACCGTACCAAGGGAAGGGGACCAGAAAAGGTCTTCTCTGCAGGGCAAAAAGGTAAGACAACGAATGGAGGAATGACTTATGTTGCCCAGCATTTT # Questionable array : NO Score: 9.19 # Score Detail : 1:0, 2:3, 3:3, 4:0.93, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCCCCCCACACGGGGGGCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: R [5,6] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCGCCCTCCACACGGAGGGCGTGGATAGAAAT with 91% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-9.80,-10.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [6-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [66.7-68.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,10.15 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //